| Definition | Clostridium acetobutylicum ATCC 824 plasmid pSOL1, complete sequence. |
|---|---|
| Accession | NC_001988 |
| Length | 192,000 |
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Identifier: 15004707
GI number: 15004707
Start: 1359
End: 3944
Strand: Direct
Name: Not Available
Synonym: CA_P0002
Alternate gene names: NA
Gene position: 1359-3944 (Clockwise)
Preceding gene: 15004706
Following gene: 15004708
Centisome position: 0.71
GC content: 32.91
Gene sequence:
>2586_bases ATGAAGAAAAAGAATGTAGTTTTGAGTATTGTCCTTGCACTTGTATTTATATTATTTTATTCAGGTAGTACTTTAAAAGC CGATTCTAATAATGCAGCAATTTCCTATGAAGCACACGTACAAAATATAGGTTGGCAGAATTGGGTTAATGATGGCGCGG AGGCAGGAACAGACGGACAGGCTCTTAGAGTTGAAGCGTTAAAAGTAAAGCTTATAAATGCACCAGTAGGAGCGCAAATT ACCTATAGAACTCATGTACAGAACATAGGTTGGCAAAATTGGGTTAATGATGGCACGGAAACCGGTACAGACGGATTAGG GTTAAGAGTTGAAGCACTAGAGATAAAGCTTGTAAATATGCCTGAATATTCTGTACAATATCAGGTACATGTACAAAATG TAGGTTGGCAGAATTGGGTTAGTGACGGAGCTGAGGCAGGAACAGATGGAAAAGGACTTAGAGTTGAGGCATTAAGGATA AAAATAGTTAAAAAAACAGCTGTTCAGGCTATTAGTTTGGATAAAACTTCTGATATGTTAAAGGTTGGTCAAACTGACAT ATTAAATGCCAATGTTAGTCCTGTAAATGTTGATAACAAAAATTTAAGTTGGACATCTTCAGATTCAAGTATAGTATCTG TGGATTCTAGTGGTAAAATTGCAGCACTTAAAAAGGGAACTGCGATAATTACAGTAGTATCTCCCGATGGAGCTAAAGCT AGTTCCTGCAAGATTACTGTAAATTCTGGAGATTTAGGAGTAACCTACGAAACGCACGTACAGAATATAGGTTGGCAAGA TTGGGTTTACGATGGGAACGAGTCAGGGACAGAAGGAAAAGGGCTTAGAATTGAAGCTTTAAAAATGAATCTTGTAAATG CGCCTTCAGGGGCACAAATTACCTATAGAACATATGTACAAAATATAGGTTGGCAGGATTGGTCTAGTAATGGAGCTGAG GCAGGAACAGAAGGAAAAGGCTTTAGAATTGAAGCACTAGATATAAAACTTATAAATATGCCTGAATACACTATTCAGTA TCAAGCTTATGTGCAAAATGTAGGCTGGCAAAATTGGGTTTCTGACGGAATTGAAGCTGGGGAAGCTGGAAAAGGACTTA GGATTGAAGCTTTAAGAGTAAGGCTTGTGAAAAAAGTGCATGTGCAGGCTATAACTTTACAAAAAGCTGATGCAAGTTTA AATATTGGAGATGTGTATAGTTTAGTTGCAACAATTTCACCAATTGATGCTACTAACAAAAATATCAAATGGACTTCTTC TAATGAATATGTTGCAAGCGTAGATGATAATGGAAATATTAAGGCACTTTCCATTGGAACTGCTGTGATAACTGCAGCTA CGGAGGACGGAAATAAGACCGTTTCTTGTAAAATTATTGTAAATAGTAGTAATAAGGAAGATACTCAGGCATTAGAAAAA GCAAAAGATATTTTAGCTCATATAATAAAACCGGATATGACACAGGTTCAAAAGGAACTTGTAATCCATGATTATATAGT AGCTAATACAAAATATGATAAGGATATATTTCATACATATGATGTACCTTATAGTGTTTATACGGCCTATGGTGTGCTTA TAAATCATGAAGCTGTATGTGCAGGGTATGCAGAAGCTTTTAAGCTAATGTGCAATATAGAAGATATTCCTGCAAACACT GTAGTTGATTATAATATTAATCATGAATGGAATATTGTTAGATTAGATGATGGAAATTATTATGAAGTAGATACTACGTG GGATGATCCTATATATTTTGATGAAAATAAATCAGATGTAAGCCATAGATACTTTAATTTATCTGATAAGCAAATGCTTG CAGATCATTCTATTAATAAGGGCGAATGGGATTCAAAGGGTTATCCAAAAGCGGCAATTGATAATAAAGAATTTTATTCA ATCACAGATGATTCATACGATAGTAATATGGTTTATACAAGCTATGCGGGAAAGCTTTCGGGAGTTGATTCAGAGGGTAA TGTTAAGGTTATAGCTAATGATGATGCAAGAAATATTATTTATTACAATGGACTCATATATTATATAAGTAATGATTCAA TATATAGAATAGATACCAACGGTCAAAGTAAAGTACAAATAGCAAGAAATGCTTCTAAAATGTATATATATAATGGAGAT ATTTATTATCTTGGAGATAATGACTGGGCTATTCACAGGGTTAAAATAGATTGGAAATATAATAACAATGATAATAGCAT ATTAGCATATACTTGGAGTGCTAATTATTTCATAAATGATGGATACTTATATTATGAAGCTAATGATCATTTAGGTCTCC ATAAAATTAATTTAAGTACTCTATCTGATCAAGAGATATTAAAAGTATCCGATTACAATGTTACAAATTATAAGGATTAT ATATATTATAAGGATTCTAATAAGCTTTATAGAGCCGATTTAAATGGTGATAATATAAAACTTATATCAAGTAATATTAC ACAATGGATGCAAATATATATGAATTATATATATTATAGTAATGATGATATCACATGGTATAAGATGGATCTTGATGGAA GCAACTTAACTAATTTACTAATTTAA
Upstream 100 bases:
>100_bases GAATTTAGCATGGGTGTTGTAATGGTTAATGACGAACGAATATCACATGTTTTTTATAAGCACCATTTAAAATTAAATAA AGTTTCATGGAGGGCTCAAT
Downstream 100 bases:
>100_bases AAAGATTGGGGAAACCCAATCTTTTTAATATTTATATATAATTAATTGTATTGGTATGTAGGACATTTATATAAATATGC TTTTTCATGCATTTTTATAT
Product: ChW repeat-/cell adhesion domain-containing transglutaminase-like protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 861; Mature: 861
Protein sequence:
>861_residues MKKKNVVLSIVLALVFILFYSGSTLKADSNNAAISYEAHVQNIGWQNWVNDGAEAGTDGQALRVEALKVKLINAPVGAQI TYRTHVQNIGWQNWVNDGTETGTDGLGLRVEALEIKLVNMPEYSVQYQVHVQNVGWQNWVSDGAEAGTDGKGLRVEALRI KIVKKTAVQAISLDKTSDMLKVGQTDILNANVSPVNVDNKNLSWTSSDSSIVSVDSSGKIAALKKGTAIITVVSPDGAKA SSCKITVNSGDLGVTYETHVQNIGWQDWVYDGNESGTEGKGLRIEALKMNLVNAPSGAQITYRTYVQNIGWQDWSSNGAE AGTEGKGFRIEALDIKLINMPEYTIQYQAYVQNVGWQNWVSDGIEAGEAGKGLRIEALRVRLVKKVHVQAITLQKADASL NIGDVYSLVATISPIDATNKNIKWTSSNEYVASVDDNGNIKALSIGTAVITAATEDGNKTVSCKIIVNSSNKEDTQALEK AKDILAHIIKPDMTQVQKELVIHDYIVANTKYDKDIFHTYDVPYSVYTAYGVLINHEAVCAGYAEAFKLMCNIEDIPANT VVDYNINHEWNIVRLDDGNYYEVDTTWDDPIYFDENKSDVSHRYFNLSDKQMLADHSINKGEWDSKGYPKAAIDNKEFYS ITDDSYDSNMVYTSYAGKLSGVDSEGNVKVIANDDARNIIYYNGLIYYISNDSIYRIDTNGQSKVQIARNASKMYIYNGD IYYLGDNDWAIHRVKIDWKYNNNDNSILAYTWSANYFINDGYLYYEANDHLGLHKINLSTLSDQEILKVSDYNVTNYKDY IYYKDSNKLYRADLNGDNIKLISSNITQWMQIYMNYIYYSNDDITWYKMDLDGSNLTNLLI
Sequences:
>Translated_861_residues MKKKNVVLSIVLALVFILFYSGSTLKADSNNAAISYEAHVQNIGWQNWVNDGAEAGTDGQALRVEALKVKLINAPVGAQI TYRTHVQNIGWQNWVNDGTETGTDGLGLRVEALEIKLVNMPEYSVQYQVHVQNVGWQNWVSDGAEAGTDGKGLRVEALRI KIVKKTAVQAISLDKTSDMLKVGQTDILNANVSPVNVDNKNLSWTSSDSSIVSVDSSGKIAALKKGTAIITVVSPDGAKA SSCKITVNSGDLGVTYETHVQNIGWQDWVYDGNESGTEGKGLRIEALKMNLVNAPSGAQITYRTYVQNIGWQDWSSNGAE AGTEGKGFRIEALDIKLINMPEYTIQYQAYVQNVGWQNWVSDGIEAGEAGKGLRIEALRVRLVKKVHVQAITLQKADASL NIGDVYSLVATISPIDATNKNIKWTSSNEYVASVDDNGNIKALSIGTAVITAATEDGNKTVSCKIIVNSSNKEDTQALEK AKDILAHIIKPDMTQVQKELVIHDYIVANTKYDKDIFHTYDVPYSVYTAYGVLINHEAVCAGYAEAFKLMCNIEDIPANT VVDYNINHEWNIVRLDDGNYYEVDTTWDDPIYFDENKSDVSHRYFNLSDKQMLADHSINKGEWDSKGYPKAAIDNKEFYS ITDDSYDSNMVYTSYAGKLSGVDSEGNVKVIANDDARNIIYYNGLIYYISNDSIYRIDTNGQSKVQIARNASKMYIYNGD IYYLGDNDWAIHRVKIDWKYNNNDNSILAYTWSANYFINDGYLYYEANDHLGLHKINLSTLSDQEILKVSDYNVTNYKDY IYYKDSNKLYRADLNGDNIKLISSNITQWMQIYMNYIYYSNDDITWYKMDLDGSNLTNLLI >Mature_861_residues MKKKNVVLSIVLALVFILFYSGSTLKADSNNAAISYEAHVQNIGWQNWVNDGAEAGTDGQALRVEALKVKLINAPVGAQI TYRTHVQNIGWQNWVNDGTETGTDGLGLRVEALEIKLVNMPEYSVQYQVHVQNVGWQNWVSDGAEAGTDGKGLRVEALRI KIVKKTAVQAISLDKTSDMLKVGQTDILNANVSPVNVDNKNLSWTSSDSSIVSVDSSGKIAALKKGTAIITVVSPDGAKA SSCKITVNSGDLGVTYETHVQNIGWQDWVYDGNESGTEGKGLRIEALKMNLVNAPSGAQITYRTYVQNIGWQDWSSNGAE AGTEGKGFRIEALDIKLINMPEYTIQYQAYVQNVGWQNWVSDGIEAGEAGKGLRIEALRVRLVKKVHVQAITLQKADASL NIGDVYSLVATISPIDATNKNIKWTSSNEYVASVDDNGNIKALSIGTAVITAATEDGNKTVSCKIIVNSSNKEDTQALEK AKDILAHIIKPDMTQVQKELVIHDYIVANTKYDKDIFHTYDVPYSVYTAYGVLINHEAVCAGYAEAFKLMCNIEDIPANT VVDYNINHEWNIVRLDDGNYYEVDTTWDDPIYFDENKSDVSHRYFNLSDKQMLADHSINKGEWDSKGYPKAAIDNKEFYS ITDDSYDSNMVYTSYAGKLSGVDSEGNVKVIANDDARNIIYYNGLIYYISNDSIYRIDTNGQSKVQIARNASKMYIYNGD IYYLGDNDWAIHRVKIDWKYNNNDNSILAYTWSANYFINDGYLYYEANDHLGLHKINLSTLSDQEILKVSDYNVTNYKDY IYYKDSNKLYRADLNGDNIKLISSNITQWMQIYMNYIYYSNDDITWYKMDLDGSNLTNLLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003343 - InterPro: IPR008964 - InterPro: IPR022409 [H]
Pfam domain/function: PF02368 Big_2 [H]
EC number: NA
Molecular weight: Translated: 96289; Mature: 96289
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKNVVLSIVLALVFILFYSGSTLKADSNNAAISYEAHVQNIGWQNWVNDGAEAGTDGQ CCCCHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEEECCCCCHHHHCCCCCCCCCCC ALRVEALKVKLINAPVGAQITYRTHVQNIGWQNWVNDGTETGTDGLGLRVEALEIKLVNM EEEEEEEEEEEEECCCCCEEEEEEECCCCCCCHHCCCCCCCCCCCCCEEEEEEEEEEEEC PEYSVQYQVHVQNVGWQNWVSDGAEAGTDGKGLRVEALRIKIVKKTAVQAISLDKTSDML CCCEEEEEEEEECCCCHHHHCCCCCCCCCCCCEEEEEEEEEEEEHHHEEEEECCCCCHHH KVGQTDILNANVSPVNVDNKNLSWTSSDSSIVSVDSSGKIAALKKGTAIITVVSPDGAKA HCCCCEEEECCCCEEECCCCCCEEECCCCEEEEECCCCCEEEEECCCEEEEEECCCCCCC SSCKITVNSGDLGVTYETHVQNIGWQDWVYDGNESGTEGKGLRIEALKMNLVNAPSGAQI CEEEEEECCCCEEEEEEHHHCCCCCCCCEECCCCCCCCCCCEEEEEEEEEEEECCCCCEE TYRTYVQNIGWQDWSSNGAEAGTEGKGFRIEALDIKLINMPEYTIQYQAYVQNVGWQNWV EEEHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEEEEHHHCCCCHHHH SDGIEAGEAGKGLRIEALRVRLVKKVHVQAITLQKADASLNIGDVYSLVATISPIDATNK HHCCCCCCCCCCEEEHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCC NIKWTSSNEYVASVDDNGNIKALSIGTAVITAATEDGNKTVSCKIIVNSSNKEDTQALEK CEEEECCCCEEEEECCCCCEEEEEECEEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHH AKDILAHIIKPDMTQVQKELVIHDYIVANTKYDKDIFHTYDVPYSVYTAYGVLINHEAVC HHHHHHHHCCCCHHHHHHHHEEEEEEEECCCCCCCEEEEECCCEEEEEEEEEEEECCHHH AGYAEAFKLMCNIEDIPANTVVDYNINHEWNIVRLDDGNYYEVDTTWDDPIYFDENKSDV HCHHHHEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCEEEEECCCCCCEEECCCCCCC SHRYFNLSDKQMLADHSINKGEWDSKGYPKAAIDNKEFYSITDDSYDSNMVYTSYAGKLS CCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCEEC GVDSEGNVKVIANDDARNIIYYNGLIYYISNDSIYRIDTNGQSKVQIARNASKMYIYNGD CCCCCCCEEEEECCCCCEEEEECCEEEEEECCEEEEEECCCCCEEEEEECCCEEEEECCE IYYLGDNDWAIHRVKIDWKYNNNDNSILAYTWSANYFINDGYLYYEANDHLGLHKINLST EEEECCCCEEEEEEEEEEEEECCCCEEEEEEEECCEEEECCEEEEECCCCCEEEEEEEEC LSDQEILKVSDYNVTNYKDYIYYKDSNKLYRADLNGDNIKLISSNITQWMQIYMNYIYYS CCCCCEEEEECCCCCCEEEEEEEECCCEEEEEECCCCCEEEEEHHHHHHHHHHEEEEEEC NDDITWYKMDLDGSNLTNLLI CCCEEEEEEECCCCCCHHHCC >Mature Secondary Structure MKKKNVVLSIVLALVFILFYSGSTLKADSNNAAISYEAHVQNIGWQNWVNDGAEAGTDGQ CCCCHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEEECCCCCHHHHCCCCCCCCCCC ALRVEALKVKLINAPVGAQITYRTHVQNIGWQNWVNDGTETGTDGLGLRVEALEIKLVNM EEEEEEEEEEEEECCCCCEEEEEEECCCCCCCHHCCCCCCCCCCCCCEEEEEEEEEEEEC PEYSVQYQVHVQNVGWQNWVSDGAEAGTDGKGLRVEALRIKIVKKTAVQAISLDKTSDML CCCEEEEEEEEECCCCHHHHCCCCCCCCCCCCEEEEEEEEEEEEHHHEEEEECCCCCHHH KVGQTDILNANVSPVNVDNKNLSWTSSDSSIVSVDSSGKIAALKKGTAIITVVSPDGAKA HCCCCEEEECCCCEEECCCCCCEEECCCCEEEEECCCCCEEEEECCCEEEEEECCCCCCC SSCKITVNSGDLGVTYETHVQNIGWQDWVYDGNESGTEGKGLRIEALKMNLVNAPSGAQI CEEEEEECCCCEEEEEEHHHCCCCCCCCEECCCCCCCCCCCEEEEEEEEEEEECCCCCEE TYRTYVQNIGWQDWSSNGAEAGTEGKGFRIEALDIKLINMPEYTIQYQAYVQNVGWQNWV EEEHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEEEEHHHCCCCHHHH SDGIEAGEAGKGLRIEALRVRLVKKVHVQAITLQKADASLNIGDVYSLVATISPIDATNK HHCCCCCCCCCCEEEHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCC NIKWTSSNEYVASVDDNGNIKALSIGTAVITAATEDGNKTVSCKIIVNSSNKEDTQALEK CEEEECCCCEEEEECCCCCEEEEEECEEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHH AKDILAHIIKPDMTQVQKELVIHDYIVANTKYDKDIFHTYDVPYSVYTAYGVLINHEAVC HHHHHHHHCCCCHHHHHHHHEEEEEEEECCCCCCCEEEEECCCEEEEEEEEEEEECCHHH AGYAEAFKLMCNIEDIPANTVVDYNINHEWNIVRLDDGNYYEVDTTWDDPIYFDENKSDV HCHHHHEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCEEEEECCCCCCEEECCCCCCC SHRYFNLSDKQMLADHSINKGEWDSKGYPKAAIDNKEFYSITDDSYDSNMVYTSYAGKLS CCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCEEC GVDSEGNVKVIANDDARNIIYYNGLIYYISNDSIYRIDTNGQSKVQIARNASKMYIYNGD CCCCCCCEEEEECCCCCEEEEECCEEEEEECCEEEEEECCCCCEEEEEECCCEEEEECCE IYYLGDNDWAIHRVKIDWKYNNNDNSILAYTWSANYFINDGYLYYEANDHLGLHKINLST EEEECCCCEEEEEEEEEEEEECCCCEEEEEEEECCEEEECCEEEEECCCCCEEEEEEEEC LSDQEILKVSDYNVTNYKDYIYYKDSNKLYRADLNGDNIKLISSNITQWMQIYMNYIYYS CCCCCEEEEECCCCCCEEEEEEEECCCEEEEEECCCCCEEEEEHHHHHHHHHHEEEEEEC NDDITWYKMDLDGSNLTNLLI CCCEEEEEEECCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11466286; 8226639 [H]