Click here to switch to the map view.

The map label for this gene is yidL [C]

Identifier: 150010469

GI number: 150010469

Start: 4740386

End: 4741192

Strand: Direct

Name: yidL [C]

Synonym: BDI_3909

Alternate gene names: 150010469

Gene position: 4740386-4741192 (Clockwise)

Preceding gene: 150010468

Following gene: 150010470

Centisome position: 98.52

GC content: 38.79

Gene sequence:

>807_bases
ATGCAGTCATTTAAAATAATAAAGCCTATTCATATATTAACTCCTTATGTGAGATATTATTGGATACTGGAAGATGGCGC
GGATGTTTCTGTATCTGAACGGACTTTACCAACGGGCTGCATACAATTAGTATTTCATAGAGGTAAAAGGCTTTTATTAG
TAGGAAAAAAAGAATCGCAGCCTCAAGCGTTCATCTGTGGGCAATGCCTCAACTTTTCAGATGTGATGTCAGCCGGAAAG
ATTGAAATGATCACGGTTGTTTTTCAGCCGTACGCGGCAAGAGCCATCCTTCAACTTCCCCTTAAGTTCTTTTATGGAGA
ACTTATAGCGGTGGATGCTATAGCAGATTTGGAATTATCAATATTATCCAGAAAAGTGATAGAGGCTGATGACCATGAAA
CTTGCATCCGCTTGATCGAGCAGTTTTTGATTCACCGTCTTTATAGGTTTGAAGGCTATGAATATAACTTAAAGCGAATA
TCCGCAGTCCTCCATCAAATAAATGAACAAGCGAAAACTAATATTTCTGAGTTATCTGAAACCGCATGCCTAAGCTCTAA
ACAGTTCAACCGCATTTTCTTAGATTATGTAGGAGCTACGCCCAAAGAGTTTCTTCGTATCGTTAGGATGCAACGAGCTT
TATTTAAGGTACAACAGAATCCATCCATTTCATTCGCTCAATTAGCTTATGAATGTGGGTTTTCAGATCAGTCACATATG
ATAAAAGAGTTTAAGCTGTTTTCCGGCTATACACCCACGGAGTATCTTTCCTTATGCGCTCCTTATTCTGATTATTTCTC
GGAATGA

Upstream 100 bases:

>100_bases
TTGAAGCTTAATGTCGCAGTATTATATGAAATGTCTCTTTTTTACTATAGAATTGATTAGGGGTTATTTACCTTTGCCCC
GATAAATTAAATTCTATAAG

Downstream 100 bases:

>100_bases
TCAAGATGTCCTTTTTCTTCTATCCTATAGATACGATACGCTCTACTTTTGTGATGTCTTCGCGAGGACATTAACAGTAA
CTATAAAAAGAAAACAAAAT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Regulatory Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator Arac Family; AraC Family Regulatory Protein; AraC/XylS Family Transcriptional Regulator; Helix-TurN-Helix Arac Domain; Arac/Xyls Family Transcriptional Regulator; AraC Family Transcription Regulator; Helix-Turn-Helix AraC Domain Protein; Fis Family Transcriptional Regulator; Transcription Regulator; Helix-Turn-Helix AraC Domain; ArsR Family Transcriptional Regulator

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MQSFKIIKPIHILTPYVRYYWILEDGADVSVSERTLPTGCIQLVFHRGKRLLLVGKKESQPQAFICGQCLNFSDVMSAGK
IEMITVVFQPYAARAILQLPLKFFYGELIAVDAIADLELSILSRKVIEADDHETCIRLIEQFLIHRLYRFEGYEYNLKRI
SAVLHQINEQAKTNISELSETACLSSKQFNRIFLDYVGATPKEFLRIVRMQRALFKVQQNPSISFAQLAYECGFSDQSHM
IKEFKLFSGYTPTEYLSLCAPYSDYFSE

Sequences:

>Translated_268_residues
MQSFKIIKPIHILTPYVRYYWILEDGADVSVSERTLPTGCIQLVFHRGKRLLLVGKKESQPQAFICGQCLNFSDVMSAGK
IEMITVVFQPYAARAILQLPLKFFYGELIAVDAIADLELSILSRKVIEADDHETCIRLIEQFLIHRLYRFEGYEYNLKRI
SAVLHQINEQAKTNISELSETACLSSKQFNRIFLDYVGATPKEFLRIVRMQRALFKVQQNPSISFAQLAYECGFSDQSHM
IKEFKLFSGYTPTEYLSLCAPYSDYFSE
>Mature_268_residues
MQSFKIIKPIHILTPYVRYYWILEDGADVSVSERTLPTGCIQLVFHRGKRLLLVGKKESQPQAFICGQCLNFSDVMSAGK
IEMITVVFQPYAARAILQLPLKFFYGELIAVDAIADLELSILSRKVIEADDHETCIRLIEQFLIHRLYRFEGYEYNLKRI
SAVLHQINEQAKTNISELSETACLSSKQFNRIFLDYVGATPKEFLRIVRMQRALFKVQQNPSISFAQLAYECGFSDQSHM
IKEFKLFSGYTPTEYLSLCAPYSDYFSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30890; Mature: 30890

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: PS01124 HTH_ARAC_FAMILY_2 ; PS00221 MIP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSFKIIKPIHILTPYVRYYWILEDGADVSVSERTLPTGCIQLVFHRGKRLLLVGKKESQ
CCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCC
PQAFICGQCLNFSDVMSAGKIEMITVVFQPYAARAILQLPLKFFYGELIAVDAIADLELS
CCHHHHHHHCCHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSRKVIEADDHETCIRLIEQFLIHRLYRFEGYEYNLKRISAVLHQINEQAKTNISELSE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
TACLSSKQFNRIFLDYVGATPKEFLRIVRMQRALFKVQQNPSISFAQLAYECGFSDQSHM
HHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHH
IKEFKLFSGYTPTEYLSLCAPYSDYFSE
HHHHHHHCCCCHHHHHHHHCCHHHHHCC
>Mature Secondary Structure
MQSFKIIKPIHILTPYVRYYWILEDGADVSVSERTLPTGCIQLVFHRGKRLLLVGKKESQ
CCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCC
PQAFICGQCLNFSDVMSAGKIEMITVVFQPYAARAILQLPLKFFYGELIAVDAIADLELS
CCHHHHHHHCCHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSRKVIEADDHETCIRLIEQFLIHRLYRFEGYEYNLKRISAVLHQINEQAKTNISELSE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
TACLSSKQFNRIFLDYVGATPKEFLRIVRMQRALFKVQQNPSISFAQLAYECGFSDQSHM
HHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHH
IKEFKLFSGYTPTEYLSLCAPYSDYFSE
HHHHHHHCCCCHHHHHHHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA