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The map label for this gene is bkdR [H]

Identifier: 150010468

GI number: 150010468

Start: 4739812

End: 4740285

Strand: Direct

Name: bkdR [H]

Synonym: BDI_3908

Alternate gene names: 150010468

Gene position: 4739812-4740285 (Clockwise)

Preceding gene: 150010466

Following gene: 150010469

Centisome position: 98.51

GC content: 34.39

Gene sequence:

>474_bases
ATGGCACTACTTGATGAGACAGATATTGAAATTCTTCATTCTTTGCAAAAGGACGCGAAGATCAATGCAAAAGAGCTTTC
TGAGAAACTTCATATCTCCAAGACTCCTATTTACGAACGAATCAAACGTTTAGAAAACGAAGGATATATAAAAGGATATG
TGGCATTGGTTGACAATAAAAAAATAGGATTACCCTTGATCATTTTCTGTAATGTATCTTTAGCTGTACACGATGATGAG
CATATCGAACGCTTCAAAGAAGAAATACGGAATATCGATGAAATAATGGAATGTTACTCGACGGGAGGTATTTATGATTT
CTTTGTCAAAGTGGTTCTTAAGGATTTAGATGCCTATAATCAATTTGTGTTCGAGAAATTAACCAAGGTTCATGGCATCG
TGAAGATGCAAAGCTCTTTTGTGCTTAATGAAATCAAGCATACTACAGTTTTGAATATACCCAAAAATAGTTGA

Upstream 100 bases:

>100_bases
ACGTCAAGCTTAAATACGATAATTTTCCTATTTTTGTCCTGTTTTGCATTCTATAATTCTAATTCGGGGATATTAAATCA
AATAAAACAGGAAAAAAACT

Downstream 100 bases:

>100_bases
TTGAAGCTTAATGTCGCAGTATTATATGAAATGTCTCTTTTTTACTATAGAATTGATTAGGGGTTATTTACCTTTGCCCC
GATAAATTAAATTCTATAAG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MALLDETDIEILHSLQKDAKINAKELSEKLHISKTPIYERIKRLENEGYIKGYVALVDNKKIGLPLIIFCNVSLAVHDDE
HIERFKEEIRNIDEIMECYSTGGIYDFFVKVVLKDLDAYNQFVFEKLTKVHGIVKMQSSFVLNEIKHTTVLNIPKNS

Sequences:

>Translated_157_residues
MALLDETDIEILHSLQKDAKINAKELSEKLHISKTPIYERIKRLENEGYIKGYVALVDNKKIGLPLIIFCNVSLAVHDDE
HIERFKEEIRNIDEIMECYSTGGIYDFFVKVVLKDLDAYNQFVFEKLTKVHGIVKMQSSFVLNEIKHTTVLNIPKNS
>Mature_156_residues
ALLDETDIEILHSLQKDAKINAKELSEKLHISKTPIYERIKRLENEGYIKGYVALVDNKKIGLPLIIFCNVSLAVHDDEH
IERFKEEIRNIDEIMECYSTGGIYDFFVKVVLKDLDAYNQFVFEKLTKVHGIVKMQSSFVLNEIKHTTVLNIPKNS

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=150, Percent_Identity=33.3333333333333, Blast_Score=106, Evalue=7e-25,
Organism=Escherichia coli, GI87081742, Length=151, Percent_Identity=33.7748344370861, Blast_Score=103, Evalue=5e-24,
Organism=Escherichia coli, GI1790182, Length=147, Percent_Identity=28.5714285714286, Blast_Score=60, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18153; Mature: 18022

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLDETDIEILHSLQKDAKINAKELSEKLHISKTPIYERIKRLENEGYIKGYVALVDNK
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEECCC
KIGLPLIIFCNVSLAVHDDEHIERFKEEIRNIDEIMECYSTGGIYDFFVKVVLKDLDAYN
CCCCCEEEEEECEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QFVFEKLTKVHGIVKMQSSFVLNEIKHTTVLNIPKNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC
>Mature Secondary Structure 
ALLDETDIEILHSLQKDAKINAKELSEKLHISKTPIYERIKRLENEGYIKGYVALVDNK
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEECCC
KIGLPLIIFCNVSLAVHDDEHIERFKEEIRNIDEIMECYSTGGIYDFFVKVVLKDLDAYN
CCCCCEEEEEECEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QFVFEKLTKVHGIVKMQSSFVLNEIKHTTVLNIPKNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]