| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150010362
Identifier: 150010362
GI number: 150010362
Start: 4629126
End: 4629977
Strand: Direct
Name: 150010362
Synonym: BDI_3797
Alternate gene names: NA
Gene position: 4629126-4629977 (Clockwise)
Preceding gene: 150010361
Following gene: 150010363
Centisome position: 96.21
GC content: 46.95
Gene sequence:
>852_bases ATGAAACACTCAAGACGTACATTTTTTAAACAAGGATTGGCGGGTGCCCTTTTATTAGGTACCTCCACGATCGCCCGGGC CGCTTTGCCGGACCCTGTAAAGCCAAAAGCCCCGAAGGCCGTAAACCCGTTCCATCTGGGAATGGCGGGATATACTTTCG TTAATTTTGATTTAGATACGACGTTGAAGACGTTGGAACGATTAGATATCCATTATCTTTGCATCAAGGATTTCCATTTG CCGTTGAATAGTACGGATGAGCAGATTAGGGCTTTTCATGATAAATGCGCTGCCCATAAAGTGACGGGATATGCCGTAGG TCCTATTTATATGAAGAGTGAGGAAGAGATAGATCGTGCGTTTGATTATGCGAAGCGGGTAGGAGTGAAGTTAATCGTCG GTGTCCCGAATTACGAGCTTTTACCCTATGTGGATAAAAAAGTGAAGGAGTATGATTTTCATTACGCTATCCACTTGCAC GGTCCTGATATTAAGACGTATCCCGATGCTACGGACGTTTGGGTGCATACGAAGGATTTAGACCCCCGTATCGGTATGTG TCTGGATGTCGGGCATGACTTGCGAAACGGCTGTGATCCTGTCGCCGACTTGAAGAAATACCATACCCGGGTATTCGATA TGCACATCAAGGACGTGACGGATTCTTCGAAGGCGGGAGTCGGGATCGAGATCGGTCGTGGAAAGATCGACTTCCCTGCG CTGATCCGTATGATGCGGGAAGTTAATTACACGGGAATGTGTAGCTTGGAATACGAGAAAGACATGAAAGACCCCTTCTT GGGGATCGCGGAGTCTATCGGCTATTTCAAGGCTGTGAGTGATTTGACATAA
Upstream 100 bases:
>100_bases GGTCGTATAGAAGTGACTTCCCAGCAAGGGGTAGGCTCTACCTTTAGCGTTATTTTCCCAAGATAAACAGTATACATTAT ATATAATATTGTAATAGACC
Downstream 100 bases:
>100_bases TGTGGGGGCGTAAATCGCCCCCTTTTAAATAGATGAAGATGAGAAGCATTCTTTTTATAGGCATAGCGGGTTTGTTGTCC GCTTGTAGCACGATTAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase Domain-Containing Protein; Sugar Phosphate Isomerases/Epimerases; Xylose Isomerase-Like Protein
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKHSRRTFFKQGLAGALLLGTSTIARAALPDPVKPKAPKAVNPFHLGMAGYTFVNFDLDTTLKTLERLDIHYLCIKDFHL PLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGVPNYELLPYVDKKVKEYDFHYAIHLH GPDIKTYPDATDVWVHTKDLDPRIGMCLDVGHDLRNGCDPVADLKKYHTRVFDMHIKDVTDSSKAGVGIEIGRGKIDFPA LIRMMREVNYTGMCSLEYEKDMKDPFLGIAESIGYFKAVSDLT
Sequences:
>Translated_283_residues MKHSRRTFFKQGLAGALLLGTSTIARAALPDPVKPKAPKAVNPFHLGMAGYTFVNFDLDTTLKTLERLDIHYLCIKDFHL PLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGVPNYELLPYVDKKVKEYDFHYAIHLH GPDIKTYPDATDVWVHTKDLDPRIGMCLDVGHDLRNGCDPVADLKKYHTRVFDMHIKDVTDSSKAGVGIEIGRGKIDFPA LIRMMREVNYTGMCSLEYEKDMKDPFLGIAESIGYFKAVSDLT >Mature_283_residues MKHSRRTFFKQGLAGALLLGTSTIARAALPDPVKPKAPKAVNPFHLGMAGYTFVNFDLDTTLKTLERLDIHYLCIKDFHL PLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGVPNYELLPYVDKKVKEYDFHYAIHLH GPDIKTYPDATDVWVHTKDLDPRIGMCLDVGHDLRNGCDPVADLKKYHTRVFDMHIKDVTDSSKAGVGIEIGRGKIDFPA LIRMMREVNYTGMCSLEYEKDMKDPFLGIAESIGYFKAVSDLT
Specific function: Unknown
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31941; Mature: 31941
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHSRRTFFKQGLAGALLLGTSTIARAALPDPVKPKAPKAVNPFHLGMAGYTFVNFDLDT CCCCHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEEEEHHH TLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRA HHHHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEECCEEECCHHHHHHH FDYAKRVGVKLIVGVPNYELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWVHTKDL HHHHHHCCEEEEEECCCCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCCEEEEECCC DPRIGMCLDVGHDLRNGCDPVADLKKYHTRVFDMHIKDVTDSSKAGVGIEIGRGKIDFPA CCCCCCEEECCCHHHCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEECCCCCCHHH LIRMMREVNYTGMCSLEYEKDMKDPFLGIAESIGYFKAVSDLT HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKHSRRTFFKQGLAGALLLGTSTIARAALPDPVKPKAPKAVNPFHLGMAGYTFVNFDLDT CCCCHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEEEEHHH TLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRA HHHHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEECCEEECCHHHHHHH FDYAKRVGVKLIVGVPNYELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWVHTKDL HHHHHHCCEEEEEECCCCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCCEEEEECCC DPRIGMCLDVGHDLRNGCDPVADLKKYHTRVFDMHIKDVTDSSKAGVGIEIGRGKIDFPA CCCCCCEEECCCHHHCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEECCCCCCHHH LIRMMREVNYTGMCSLEYEKDMKDPFLGIAESIGYFKAVSDLT HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA