| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150010222
Identifier: 150010222
GI number: 150010222
Start: 4454475
End: 4455380
Strand: Direct
Name: 150010222
Synonym: BDI_3645
Alternate gene names: NA
Gene position: 4454475-4455380 (Clockwise)
Preceding gene: 150010221
Following gene: 150010223
Centisome position: 92.58
GC content: 48.23
Gene sequence:
>906_bases ATGAGTACTTGGAATAAGATTATGGAATGTGTCCCTAACTTCAGTGAAGGACGGGATTTGGAGAAGATAGATAAGATCGT AGCGCCTTTCCGGGCTAAGACGGGTGTTAAACTGTTGGACTATAGTAATGACGAGGATCACAATCGTTTGGTTGTTACCG TGGTAGGGGAGCCAGTCGCTTTAAAACAAGCCGTATTGGAGGCCATTGGAGTTGCTGTTGAGCTGATCGATTTAAACAAG CATAGCGGTCAACATCCTCGAATGGGGGCCGTAGATGTTGTTCCTTTTATACCGATTCGCGGATGTACGATGGAAGAGGC GATCGCCTTGTCTAAGGAAGTAGGGGAGGAAGTGGGCACTCGTTATGCCGTACCTGTCTTCTTATATGAGAAATCAGCTT CCGCCCCTTATCGGGAGAATCTGGCGGCGATCCGTAAAGGAGAGTTTGAGGGGATGGCAGAGAAAATCCATCAACCGGAG TGGAAACCTGATTTTGGTCCGGCCGAAAGACATCCGACAGCCGGTACGGTCGCCATAGGAGCCCGCATGCCTTTGGTCGC CTATAATGTGAACTTAGGAACGAATCAATTGCATATCGCTACGGATATAGCGAAGAAAATCCGTTTCATCGGCGGAGGTT TACGCTATTGTAAAGCGATGGGGGTTGAGTTGAAGGAACGTGGTATCGTACAGGTCTCTATTAATATGACCGATTATACC CGTACGGCCTTGTACCGGGCCTTCGAGTTAGTTCGTATCGAAGCTCGCAGATATGGTGTTCCGGTGGTGGGGAGCGAGAT TATCGGCTTGGTTCCTATGGAGGCGTTGATCGATACGGCCTCTTACTATTTGGGATTAGAGGACTTTTCTATGAATCAAG TATTGGAAGCCCGTATTATGGAATAG
Upstream 100 bases:
>100_bases TCAATGAGAATCGTGGCGAACAGTATCATATTACCCTCCCGTATATCCCGGAGAAAGCGTTTATTCATGAAATCGTACAA ACATCATTAAATAAAAAGGT
Downstream 100 bases:
>100_bases CGTATGGAGAATAGCAAGATATTAATCAGGAATGCTGCCCAGATCGTCACTTGCCATGGGGATAAGGCGCGACGGGGAGC GGAGATGTCTGATTTAGGCG
Product: formiminotransferase-cyclodeaminase
Products: NA
Alternate protein names: Glutamate Formimidoyltransferase; Formimidoyltransferase-Cyclodeaminase; Formiminotransferase-Cyclodeaminase; Formiminotransferase Domain Protein; Formiminotransferase-Cyclodeaminase-Related Protein; Formiminotransferase; Formimidoyltetrahydrofolate Cyclodeaminase; Formiminotransferase-Like
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSTWNKIMECVPNFSEGRDLEKIDKIVAPFRAKTGVKLLDYSNDEDHNRLVVTVVGEPVALKQAVLEAIGVAVELIDLNK HSGQHPRMGAVDVVPFIPIRGCTMEEAIALSKEVGEEVGTRYAVPVFLYEKSASAPYRENLAAIRKGEFEGMAEKIHQPE WKPDFGPAERHPTAGTVAIGARMPLVAYNVNLGTNQLHIATDIAKKIRFIGGGLRYCKAMGVELKERGIVQVSINMTDYT RTALYRAFELVRIEARRYGVPVVGSEIIGLVPMEALIDTASYYLGLEDFSMNQVLEARIME
Sequences:
>Translated_301_residues MSTWNKIMECVPNFSEGRDLEKIDKIVAPFRAKTGVKLLDYSNDEDHNRLVVTVVGEPVALKQAVLEAIGVAVELIDLNK HSGQHPRMGAVDVVPFIPIRGCTMEEAIALSKEVGEEVGTRYAVPVFLYEKSASAPYRENLAAIRKGEFEGMAEKIHQPE WKPDFGPAERHPTAGTVAIGARMPLVAYNVNLGTNQLHIATDIAKKIRFIGGGLRYCKAMGVELKERGIVQVSINMTDYT RTALYRAFELVRIEARRYGVPVVGSEIIGLVPMEALIDTASYYLGLEDFSMNQVLEARIME >Mature_300_residues STWNKIMECVPNFSEGRDLEKIDKIVAPFRAKTGVKLLDYSNDEDHNRLVVTVVGEPVALKQAVLEAIGVAVELIDLNKH SGQHPRMGAVDVVPFIPIRGCTMEEAIALSKEVGEEVGTRYAVPVFLYEKSASAPYRENLAAIRKGEFEGMAEKIHQPEW KPDFGPAERHPTAGTVAIGARMPLVAYNVNLGTNQLHIATDIAKKIRFIGGGLRYCKAMGVELKERGIVQVSINMTDYTR TALYRAFELVRIEARRYGVPVVGSEIIGLVPMEALIDTASYYLGLEDFSMNQVLEARIME
Specific function: Unknown
COG id: COG3643
COG function: function code E; Glutamate formiminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI46255035, Length=292, Percent_Identity=41.0958904109589, Blast_Score=232, Evalue=4e-61, Organism=Homo sapiens, GI11140815, Length=292, Percent_Identity=41.0958904109589, Blast_Score=232, Evalue=4e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33350; Mature: 33219
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: PS00414 PROFILIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTWNKIMECVPNFSEGRDLEKIDKIVAPFRAKTGVKLLDYSNDEDHNRLVVTVVGEPVA CCHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHCCCEEEEECCCCCCCCEEEEEECCCCHH LKQAVLEAIGVAVELIDLNKHSGQHPRMGAVDVVPFIPIRGCTMEEAIALSKEVGEEVGT HHHHHHHHHHHEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCC RYAVPVFLYEKSASAPYRENLAAIRKGEFEGMAEKIHQPEWKPDFGPAERHPTAGTVAIG EEEEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEC ARMPLVAYNVNLGTNQLHIATDIAKKIRFIGGGLRYCKAMGVELKERGIVQVSINMTDYT CCCCEEEEEECCCCCEEEEHHHHHHHHHHHCCHHHHHHHHCCCHHHCCEEEEEEECCHHH RTALYRAFELVRIEARRYGVPVVGSEIIGLVPMEALIDTASYYLGLEDFSMNQVLEARIM HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC E C >Mature Secondary Structure STWNKIMECVPNFSEGRDLEKIDKIVAPFRAKTGVKLLDYSNDEDHNRLVVTVVGEPVA CHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHCCCEEEEECCCCCCCCEEEEEECCCCHH LKQAVLEAIGVAVELIDLNKHSGQHPRMGAVDVVPFIPIRGCTMEEAIALSKEVGEEVGT HHHHHHHHHHHEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCC RYAVPVFLYEKSASAPYRENLAAIRKGEFEGMAEKIHQPEWKPDFGPAERHPTAGTVAIG EEEEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEC ARMPLVAYNVNLGTNQLHIATDIAKKIRFIGGGLRYCKAMGVELKERGIVQVSINMTDYT CCCCEEEEEECCCCCEEEEHHHHHHHHHHHCCHHHHHHHHCCCHHHCCEEEEEEECCHHH RTALYRAFELVRIEARRYGVPVVGSEIIGLVPMEALIDTASYYLGLEDFSMNQVLEARIM HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA