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The map label for this gene is tsf

Identifier: 150010071

GI number: 150010071

Start: 4273810

End: 4274799

Strand: Direct

Name: tsf

Synonym: BDI_3490

Alternate gene names: 150010071

Gene position: 4273810-4274799 (Clockwise)

Preceding gene: 150010070

Following gene: 150010077

Centisome position: 88.83

GC content: 46.97

Gene sequence:

>990_bases
ATGGCTGTAACAATGGCTGATATTACCAAGCTGCGCAAAATGAGTGGAGCTGGTATGATGGACTGTAAGAAGGCTTTGAC
AGAGTCTGACGGTGACATCGAGAAAGCAATGGAAATTATCCGTAAAAAAGGACAGGCTATCGCCGCTAAACGTTCTGATC
GTGAGGCTGCCGAGGGTTGTGTGTTGGCTAAGAAGGATGGCGAGTTCGCCGCTATCATCGCTTTGAAGTGCGAAACGGAC
TTCGTGGCTAAGAATGAGGACTTCGTGGCTTTGACTCAAGCTATCTTGGACGCTGCCGTGGCTAACAAATGCCGTACTTT
GGACGAGGTGAAAGCTTTGCCTATGGGCAAGGGTACTATCCAAGAAGCTGTTACGGATCGTAGTGGTATCACTGGCGAGA
AAATGGAGTTGGATGGCTACTGCGTAGTTGAAGGTGCTTACACTACTGTATACAACCATATGGGTAAGAACCAACTTTGT
ACGATCGCCGCTTTCAACAAGGAGTCTGAGGAAGCCGCTCACAATATTGTTATGCAGATCGCCGCTATGAATCCGATTGC
TATTGATGAGGCTGGTGTTCCTGAGTCTGTAAAAGAGAAAGAGATCCAGGTTGCTATCGAGAAGACGAAGGCTGAGCAGG
TGCAGAAGGCTGTAGAGGCTGCATTGAAGAAGGCTGGTATTAATCCTTCGCATGTAGATAGCGAGGCTCACATGGAAAGT
AACATGGATAAGGGTTGGATCACGGCAGAGGATGTAGCTAAGGCTAAAGAAATCATTGCTACTGTTTCCGCTGAGAAGGC
GGCTAACTTACCTCAACAGATGATCGAGAATATCGCTAAGGGTCGTCTGGGCAAGTTCTTGAAAGAGGTTTGCTTGTTGA
ACCAAGAAGACATTATGGATGGCAAGAAGACTGTAAGAGAGACAATGAAGGAGATCGATCCTGAGTTACAAATCTTGGCG
TTCAAACGTTTCACTTTGCGTGCTGAGTAA

Upstream 100 bases:

>100_bases
TACAATGGGCAGTTGGCTTTTGACAGGATTTGTCAATTGGCAACTGTCCATTGTCAATTTTTGAAAGTATAAACATTTTA
AAGATAAAGGAAATAAGATT

Downstream 100 bases:

>100_bases
TTGCGGTAACGTATTTGATATAAAGAAAAAGGCGATACAACTCAATGTATCGCCTTTTTTATGAAGTATAGCTTACTTGC
CCATAGAAGATATACTTACT

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MAVTMADITKLRKMSGAGMMDCKKALTESDGDIEKAMEIIRKKGQAIAAKRSDREAAEGCVLAKKDGEFAAIIALKCETD
FVAKNEDFVALTQAILDAAVANKCRTLDEVKALPMGKGTIQEAVTDRSGITGEKMELDGYCVVEGAYTTVYNHMGKNQLC
TIAAFNKESEEAAHNIVMQIAAMNPIAIDEAGVPESVKEKEIQVAIEKTKAEQVQKAVEAALKKAGINPSHVDSEAHMES
NMDKGWITAEDVAKAKEIIATVSAEKAANLPQQMIENIAKGRLGKFLKEVCLLNQEDIMDGKKTVRETMKEIDPELQILA
FKRFTLRAE

Sequences:

>Translated_329_residues
MAVTMADITKLRKMSGAGMMDCKKALTESDGDIEKAMEIIRKKGQAIAAKRSDREAAEGCVLAKKDGEFAAIIALKCETD
FVAKNEDFVALTQAILDAAVANKCRTLDEVKALPMGKGTIQEAVTDRSGITGEKMELDGYCVVEGAYTTVYNHMGKNQLC
TIAAFNKESEEAAHNIVMQIAAMNPIAIDEAGVPESVKEKEIQVAIEKTKAEQVQKAVEAALKKAGINPSHVDSEAHMES
NMDKGWITAEDVAKAKEIIATVSAEKAANLPQQMIENIAKGRLGKFLKEVCLLNQEDIMDGKKTVRETMKEIDPELQILA
FKRFTLRAE
>Mature_328_residues
AVTMADITKLRKMSGAGMMDCKKALTESDGDIEKAMEIIRKKGQAIAAKRSDREAAEGCVLAKKDGEFAAIIALKCETDF
VAKNEDFVALTQAILDAAVANKCRTLDEVKALPMGKGTIQEAVTDRSGITGEKMELDGYCVVEGAYTTVYNHMGKNQLCT
IAAFNKESEEAAHNIVMQIAAMNPIAIDEAGVPESVKEKEIQVAIEKTKAEQVQKAVEAALKKAGINPSHVDSEAHMESN
MDKGWITAEDVAKAKEIIATVSAEKAANLPQQMIENIAKGRLGKFLKEVCLLNQEDIMDGKKTVRETMKEIDPELQILAF
KRFTLRAE

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI171846268, Length=229, Percent_Identity=26.2008733624454, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1786366, Length=322, Percent_Identity=31.6770186335404, Blast_Score=123, Evalue=1e-29,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_PARD8 (A6LHM8)

Other databases:

- EMBL:   CP000140
- RefSeq:   YP_001304814.1
- ProteinModelPortal:   A6LHM8
- SMR:   A6LHM8
- STRING:   A6LHM8
- GeneID:   5308639
- GenomeReviews:   CP000140_GR
- KEGG:   pdi:BDI_3490
- eggNOG:   COG0264
- HOGENOM:   HBG713289
- OMA:   HASAMKP
- ProtClustDB:   PRK09377
- BioCyc:   PDIS435591:BDI_3490-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 35826; Mature: 35695

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTMADITKLRKMSGAGMMDCKKALTESDGDIEKAMEIIRKKGQAIAAKRSDREAAEGC
CEEEHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCHHHHCCE
VLAKKDGEFAAIIALKCETDFVAKNEDFVALTQAILDAAVANKCRTLDEVKALPMGKGTI
EEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
QEAVTDRSGITGEKMELDGYCVVEGAYTTVYNHMGKNQLCTIAAFNKESEEAAHNIVMQI
HHHHHHCCCCCCCEEEECCEEEEECHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH
AAMNPIAIDEAGVPESVKEKEIQVAIEKTKAEQVQKAVEAALKKAGINPSHVDSEAHMES
HHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHC
NMDKGWITAEDVAKAKEIIATVSAEKAANLPQQMIENIAKGRLGKFLKEVCLLNQEDIMD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC
GKKTVRETMKEIDPELQILAFKRFTLRAE
HHHHHHHHHHHCCCCCEEEEEHHHHEECC
>Mature Secondary Structure 
AVTMADITKLRKMSGAGMMDCKKALTESDGDIEKAMEIIRKKGQAIAAKRSDREAAEGC
EEEHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCHHHHCCE
VLAKKDGEFAAIIALKCETDFVAKNEDFVALTQAILDAAVANKCRTLDEVKALPMGKGTI
EEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
QEAVTDRSGITGEKMELDGYCVVEGAYTTVYNHMGKNQLCTIAAFNKESEEAAHNIVMQI
HHHHHHCCCCCCCEEEECCEEEEECHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH
AAMNPIAIDEAGVPESVKEKEIQVAIEKTKAEQVQKAVEAALKKAGINPSHVDSEAHMES
HHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHC
NMDKGWITAEDVAKAKEIIATVSAEKAANLPQQMIENIAKGRLGKFLKEVCLLNQEDIMD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC
GKKTVRETMKEIDPELQILAFKRFTLRAE
HHHHHHHHHHHCCCCCEEEEEHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA