| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150010032
Identifier: 150010032
GI number: 150010032
Start: 4207794
End: 4208096
Strand: Direct
Name: 150010032
Synonym: BDI_3451
Alternate gene names: NA
Gene position: 4207794-4208096 (Clockwise)
Preceding gene: 150010028
Following gene: 150010033
Centisome position: 87.46
GC content: 53.47
Gene sequence:
>303_bases ATGCCTCCAGCAGCAAGATTGACAGATATGCATACATGTCCTATGCAAACCCCGGCTTGGCCATCACCGATACCCCATGT AGGCGGTCCTATCGTAGGGCCGGGAGCGGCGACTGTTCTAATCGGCAAGCTACCGGCGGCGGTAATGGGAGATAATTGCG TTTGTGTAGGCCCTCCGGATACGATCATTAAAGGATCTTCCACCGTGATGATCTGCGGTAAACCTGCCGCCAGAATGGGA GATACGACAGCTCACGGAGGGCAAATCGTATTGGGATGTCCCACCGTTATAATAGGTGGTTAG
Upstream 100 bases:
>100_bases TGATTAAAAATATTAGCGCGCAAAAGTAGTATATTCATGATAAATATTATATATTTGTAGATTATCATTTCAATAAATCG TTAACTAAAAAGTAATAAAT
Downstream 100 bases:
>100_bases GAGGATCTGCGGCATATAATATATGTATATTGTGAGAATATTACTATCTTTGCCGCCACTTGAAAACTAAAAATAACAAG ACATGGAAACAGTAGTAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion System Protein EvpJ; Type VI Secretion PAAR Domain Protein; PAAR Motif Family; PAAR Domain-Containing Protein Containing Protein; Superfamily II DNA Helicase
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MPPAARLTDMHTCPMQTPAWPSPIPHVGGPIVGPGAATVLIGKLPAAVMGDNCVCVGPPDTIIKGSSTVMICGKPAARMG DTTAHGGQIVLGCPTVIIGG
Sequences:
>Translated_100_residues MPPAARLTDMHTCPMQTPAWPSPIPHVGGPIVGPGAATVLIGKLPAAVMGDNCVCVGPPDTIIKGSSTVMICGKPAARMG DTTAHGGQIVLGCPTVIIGG >Mature_99_residues PPAARLTDMHTCPMQTPAWPSPIPHVGGPIVGPGAATVLIGKLPAAVMGDNCVCVGPPDTIIKGSSTVMICGKPAARMGD TTAHGGQIVLGCPTVIIGG
Specific function: Unknown
COG id: COG4104
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9907; Mature: 9776
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 11.0 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 10.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPAARLTDMHTCPMQTPAWPSPIPHVGGPIVGPGAATVLIGKLPAAVMGDNCVCVGPPD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCHHCCCCEEEECCCC TIIKGSSTVMICGKPAARMGDTTAHGGQIVLGCPTVIIGG CEEECCCEEEEECCCCCCCCCCCCCCCEEEEECCEEEECC >Mature Secondary Structure PPAARLTDMHTCPMQTPAWPSPIPHVGGPIVGPGAATVLIGKLPAAVMGDNCVCVGPPD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCHHCCCCEEEECCCC TIIKGSSTVMICGKPAARMGDTTAHGGQIVLGCPTVIIGG CEEECCCEEEEECCCCCCCCCCCCCCCEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA