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The map label for this gene is bepC [H]

Identifier: 150009935

GI number: 150009935

Start: 4062431

End: 4063747

Strand: Direct

Name: bepC [H]

Synonym: BDI_3352

Alternate gene names: 150009935

Gene position: 4062431-4063747 (Clockwise)

Preceding gene: 150009934

Following gene: 150009936

Centisome position: 84.43

GC content: 47.61

Gene sequence:

>1317_bases
ATGAAACAATACGCTTTATTATTCGCATGTCTGTTCTTCCTCTGTGTAGGGAGTAAGGCACAAGAGCAACCTACCCGATG
GACGTTGCGCACTTGCTTGGATTACGCTTTGGAGCATAATATCCAAGTAAAGAAAAGCAAGGTGTCGCATCTTTCCGGTA
TAGAGGATACGAAGCAGGCGAAAGCACAGCTTTTCCCTTCCCTTTCGGCTTCGGTTACCCAAGGATTCGTGAATTATCCT
TCGAGCGACGCCGCTACGAATAATAGCTATAGCGGTAATTATGCGCTGAACGCTAAATGGACGCTTTTTGATGGAGGGCA
ACGTGTACAGACGATCAAGCAACAGGAAATACAAAATACCGTCGATGAGCTAGGTATCGAGCAAAACGAGGATGATATCC
AAATCTCCTTGATACAGACCTATATGCAGGTACTATATGCGATGGAGTCCGTTCGTATCAACCAAAATACGGTCGAGGTA
TCTACGGCGCAGCGGGATCGTGCGGTGGAGTTGCTACGTGCCGGTTCGATTTCGAAAGTGGATTTGGCCCAGTTGGAAAG
CCAGTTAAGCACCGATAAATATCAATTGGTCGTAGCCCAGACGAATCTAGACAATTATAAGTTGCAATTGAAGCAATTAC
TAGAACTGGATATAACCGAAGAGATCGAATTGGTGATGCCGGAGCTTACGGAGAAAGATATCTTAACCCCGCTTCCGAGC
AAGCAAACGATTTACAATACCTCTCTGGCCGTGATGCCGCAAATAAAGAGCAGTGAGCTGGCCGTGGACATCGCTGAGCT
GGAGAAGAAAAAGGCGAAAGGCGCTTTCCTCCCTTCGCTCTCCATGAACGCCGGGCTGGGTACCGGCCATCTCTCCGGAA
CGGATTACGCTTTCGGTAGCCAGATCTGGAATAGCTTCAACGAGAGTGTCGGATTGACGATCAGCATCCCTATCTTCAGT
AACCGTCAGTATAAGACGGCCTATAACAAGGCGAAATACGCGATTACCACCAGCCAGTTGGAGTTGCTGAATACCCAAAA
ACAATTGCTGCAAACCGTGGAGGGGATCTATCTGGACGCTACCTCGTCGCAGACCCAATATACCTCGGCTACCGAACGCT
TGAGTTACGTGAAGGAAAGCTATAACTTGATCGATGAGCAATTCAGCCTCGGTATGAAAAATACGCTTGAGCTATTGACG
GAGAAGAACAATTATCTGACCGCCCAGCAAGAGCAGCTACAAGCGAAATACATGGCCTTGATGAGCGTCCAGTTGCTGAA
TGTTTATCAGAAGAAGCCGGTTGCGGAGAATTATTAA

Upstream 100 bases:

>100_bases
CGTTTAATCGGTGAAAACAGCCCCTTTTTCTAGTCTGGTTGCCCATGTTTTTAAGGTAATATAGTTTTGCTTTCGTAAAA
AGATAGAAAACGAAGGCAAT

Downstream 100 bases:

>100_bases
CCCACTAATGGATATATATATATTTACTCCACTCTCTTTTTTCAAGGTTACCCTGCGACGGAAGTCGCGGGGGCCTTTTG
AACAAGAACAGAACGTAAAA

Product: outer membrane efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MKQYALLFACLFFLCVGSKAQEQPTRWTLRTCLDYALEHNIQVKKSKVSHLSGIEDTKQAKAQLFPSLSASVTQGFVNYP
SSDAATNNSYSGNYALNAKWTLFDGGQRVQTIKQQEIQNTVDELGIEQNEDDIQISLIQTYMQVLYAMESVRINQNTVEV
STAQRDRAVELLRAGSISKVDLAQLESQLSTDKYQLVVAQTNLDNYKLQLKQLLELDITEEIELVMPELTEKDILTPLPS
KQTIYNTSLAVMPQIKSSELAVDIAELEKKKAKGAFLPSLSMNAGLGTGHLSGTDYAFGSQIWNSFNESVGLTISIPIFS
NRQYKTAYNKAKYAITTSQLELLNTQKQLLQTVEGIYLDATSSQTQYTSATERLSYVKESYNLIDEQFSLGMKNTLELLT
EKNNYLTAQQEQLQAKYMALMSVQLLNVYQKKPVAENY

Sequences:

>Translated_438_residues
MKQYALLFACLFFLCVGSKAQEQPTRWTLRTCLDYALEHNIQVKKSKVSHLSGIEDTKQAKAQLFPSLSASVTQGFVNYP
SSDAATNNSYSGNYALNAKWTLFDGGQRVQTIKQQEIQNTVDELGIEQNEDDIQISLIQTYMQVLYAMESVRINQNTVEV
STAQRDRAVELLRAGSISKVDLAQLESQLSTDKYQLVVAQTNLDNYKLQLKQLLELDITEEIELVMPELTEKDILTPLPS
KQTIYNTSLAVMPQIKSSELAVDIAELEKKKAKGAFLPSLSMNAGLGTGHLSGTDYAFGSQIWNSFNESVGLTISIPIFS
NRQYKTAYNKAKYAITTSQLELLNTQKQLLQTVEGIYLDATSSQTQYTSATERLSYVKESYNLIDEQFSLGMKNTLELLT
EKNNYLTAQQEQLQAKYMALMSVQLLNVYQKKPVAENY
>Mature_438_residues
MKQYALLFACLFFLCVGSKAQEQPTRWTLRTCLDYALEHNIQVKKSKVSHLSGIEDTKQAKAQLFPSLSASVTQGFVNYP
SSDAATNNSYSGNYALNAKWTLFDGGQRVQTIKQQEIQNTVDELGIEQNEDDIQISLIQTYMQVLYAMESVRINQNTVEV
STAQRDRAVELLRAGSISKVDLAQLESQLSTDKYQLVVAQTNLDNYKLQLKQLLELDITEEIELVMPELTEKDILTPLPS
KQTIYNTSLAVMPQIKSSELAVDIAELEKKKAKGAFLPSLSMNAGLGTGHLSGTDYAFGSQIWNSFNESVGLTISIPIFS
NRQYKTAYNKAKYAITTSQLELLNTQKQLLQTVEGIYLDATSSQTQYTSATERLSYVKESYNLIDEQFSLGMKNTLELLT
EKNNYLTAQQEQLQAKYMALMSVQLLNVYQKKPVAENY

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=390, Percent_Identity=21.5384615384615, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 49226; Mature: 49226

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQYALLFACLFFLCVGSKAQEQPTRWTLRTCLDYALEHNIQVKKSKVSHLSGIEDTKQA
CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHCCCCHHHHH
KAQLFPSLSASVTQGFVNYPSSDAATNNSYSGNYALNAKWTLFDGGQRVQTIKQQEIQNT
HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHH
VDELGIEQNEDDIQISLIQTYMQVLYAMESVRINQNTVEVSTAQRDRAVELLRAGSISKV
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEEHHHHHHHHHHHHCCCCCCH
DLAQLESQLSTDKYQLVVAQTNLDNYKLQLKQLLELDITEEIELVMPELTEKDILTPLPS
HHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCC
KQTIYNTSLAVMPQIKSSELAVDIAELEKKKAKGAFLPSLSMNAGLGTGHLSGTDYAFGS
CCEEECCCEEEECCCCCCHHEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
QIWNSFNESVGLTISIPIFSNRQYKTAYNKAKYAITTSQLELLNTQKQLLQTVEGIYLDA
HHHHHHCCCCCEEEEEEEECCCCHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEC
TSSQTQYTSATERLSYVKESYNLIDEQFSLGMKNTLELLTEKNNYLTAQQEQLQAKYMAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
MSVQLLNVYQKKPVAENY
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKQYALLFACLFFLCVGSKAQEQPTRWTLRTCLDYALEHNIQVKKSKVSHLSGIEDTKQA
CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHCCCCHHHHH
KAQLFPSLSASVTQGFVNYPSSDAATNNSYSGNYALNAKWTLFDGGQRVQTIKQQEIQNT
HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHH
VDELGIEQNEDDIQISLIQTYMQVLYAMESVRINQNTVEVSTAQRDRAVELLRAGSISKV
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEEHHHHHHHHHHHHCCCCCCH
DLAQLESQLSTDKYQLVVAQTNLDNYKLQLKQLLELDITEEIELVMPELTEKDILTPLPS
HHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCC
KQTIYNTSLAVMPQIKSSELAVDIAELEKKKAKGAFLPSLSMNAGLGTGHLSGTDYAFGS
CCEEECCCEEEECCCCCCHHEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
QIWNSFNESVGLTISIPIFSNRQYKTAYNKAKYAITTSQLELLNTQKQLLQTVEGIYLDA
HHHHHHCCCCCEEEEEEEECCCCHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEC
TSSQTQYTSATERLSYVKESYNLIDEQFSLGMKNTLELLTEKNNYLTAQQEQLQAKYMAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
MSVQLLNVYQKKPVAENY
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]