| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009851
Identifier: 150009851
GI number: 150009851
Start: 3948050
End: 3949279
Strand: Direct
Name: 150009851
Synonym: BDI_3267
Alternate gene names: NA
Gene position: 3948050-3949279 (Clockwise)
Preceding gene: 150009848
Following gene: 150009852
Centisome position: 82.06
GC content: 49.11
Gene sequence:
>1230_bases ATGAGACGGATTACCCTGTTGCTCGTGGGGATGCTAGCCTTATTTTCTACGACAGCGCAAAGAAAAAACTTCACTTACAA ATTCTACGGCTTCGTCCGTGGAGATCTTTTCTACAATTCCCGGGCTAATATGGCTCCGATCGATGGGAACTTTTATCTCT ATCCTTTGGATAAGAGTTTTGATGCGGATGGCAAGGATTTGAACGCCACGCCGAATGGCAGTTTCTATACGTTCACTTCC CGCTTGGGCTTGGACGTGACGGGTCCCGATATCGGCAAGGCTCGTTCCTCCGCTAAGATAGAGACGGACTTTGGCGGTTT TTCCGGTAGTAATACGATGTTACGTATCCGGCAGGCATACGTAAACTTGGATTGGGGAAAATCGGCGGTATTAGTAGGGA TCACGTGGCATCCCTTGTTTGGCGCCGTGATGCCGGATGTCTTGAATCTTTCCACCGGAGCGCCGTTCCAGCCTTTCAAC CGTAGCCCGCAGATCCGTTACCAGTATAAGGCGAATAGCCGGGTACAACTGACGGCTTCCGTGTTGTGGCAATTACAATA CCTTTCCAGCGGACCGAAAGGAATGAGCGAGGATTATATCAAGAATAGTTGCATTCCGGAGATGTTCGTGGGGGCGGACT TTACCCCCGCGGATGGCTGGTTGATGGGTCTCGGCGCTCATATGATCTCCTTGAAGCCCCGTACTTCCACGGAATGGAAG GAGCAAACTTTTAAGGTGAACGAGCGAATGACGGCCTTCTCTTACGAGGCACATTTGAAGTATAGCGGAAGAAACTATAC CTTTGCGGCGAAAACCTTGATGGCCTCTGCCTTGGATCATACCGCTTTATTGGGCGGTTACGGGGTGAGCTCGGTGGACT CCCGTACGGGCGAACAGGGATATACGCCTTTTCGCCATTCTACGACATGGGTGAATTTCGCCTACGGAACGAAATGGAGA CCGGGAGTTTTCGTCGGATATACGAAGAATTTGGGAACCGGGAAGTCCTTGGTCTCAGCGGATAAGGTGTATGGTATGGG ATTGGATATCGATCAATTAATAACCGTCAGCTTAAACGTATCGTATAATTTACCGCATTGGAAGTTCGGTTTCGAGTATT GTCCGGCGACAGCTTATTATGGCACGACCGACTTAGAGAGCGGACGTATCGAGCAAACACATGCGATAACGAATCATCGT ATATTAGGTTTGATGATGTATTATTTTTAA
Upstream 100 bases:
>100_bases AAGCAAAGGAACAAATAATATTTCGTTTCTTCAAATTGAATCCATAAAAATATATACATTCGCGGCTTATAAGGTAAGAA AAATAACAAACTGAATTATA
Downstream 100 bases:
>100_bases AGATAGATTGACCGGAATGGAAATGAAACGCAACTTGCTTCTTTTGATCGGCCTATGTATGGCGGTATGCGTACAGGCGC AAAAGAAAAACTTCTCTTAC
Product: outer membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MRRITLLLVGMLALFSTTAQRKNFTYKFYGFVRGDLFYNSRANMAPIDGNFYLYPLDKSFDADGKDLNATPNGSFYTFTS RLGLDVTGPDIGKARSSAKIETDFGGFSGSNTMLRIRQAYVNLDWGKSAVLVGITWHPLFGAVMPDVLNLSTGAPFQPFN RSPQIRYQYKANSRVQLTASVLWQLQYLSSGPKGMSEDYIKNSCIPEMFVGADFTPADGWLMGLGAHMISLKPRTSTEWK EQTFKVNERMTAFSYEAHLKYSGRNYTFAAKTLMASALDHTALLGGYGVSSVDSRTGEQGYTPFRHSTTWVNFAYGTKWR PGVFVGYTKNLGTGKSLVSADKVYGMGLDIDQLITVSLNVSYNLPHWKFGFEYCPATAYYGTTDLESGRIEQTHAITNHR ILGLMMYYF
Sequences:
>Translated_409_residues MRRITLLLVGMLALFSTTAQRKNFTYKFYGFVRGDLFYNSRANMAPIDGNFYLYPLDKSFDADGKDLNATPNGSFYTFTS RLGLDVTGPDIGKARSSAKIETDFGGFSGSNTMLRIRQAYVNLDWGKSAVLVGITWHPLFGAVMPDVLNLSTGAPFQPFN RSPQIRYQYKANSRVQLTASVLWQLQYLSSGPKGMSEDYIKNSCIPEMFVGADFTPADGWLMGLGAHMISLKPRTSTEWK EQTFKVNERMTAFSYEAHLKYSGRNYTFAAKTLMASALDHTALLGGYGVSSVDSRTGEQGYTPFRHSTTWVNFAYGTKWR PGVFVGYTKNLGTGKSLVSADKVYGMGLDIDQLITVSLNVSYNLPHWKFGFEYCPATAYYGTTDLESGRIEQTHAITNHR ILGLMMYYF >Mature_409_residues MRRITLLLVGMLALFSTTAQRKNFTYKFYGFVRGDLFYNSRANMAPIDGNFYLYPLDKSFDADGKDLNATPNGSFYTFTS RLGLDVTGPDIGKARSSAKIETDFGGFSGSNTMLRIRQAYVNLDWGKSAVLVGITWHPLFGAVMPDVLNLSTGAPFQPFN RSPQIRYQYKANSRVQLTASVLWQLQYLSSGPKGMSEDYIKNSCIPEMFVGADFTPADGWLMGLGAHMISLKPRTSTEWK EQTFKVNERMTAFSYEAHLKYSGRNYTFAAKTLMASALDHTALLGGYGVSSVDSRTGEQGYTPFRHSTTWVNFAYGTKWR PGVFVGYTKNLGTGKSLVSADKVYGMGLDIDQLITVSLNVSYNLPHWKFGFEYCPATAYYGTTDLESGRIEQTHAITNHR ILGLMMYYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45763; Mature: 45763
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRITLLLVGMLALFSTTAQRKNFTYKFYGFVRGDLFYNSRANMAPIDGNFYLYPLDKSF CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCCCCCEECCCEEEEECCCCC DADGKDLNATPNGSFYTFTSRLGLDVTGPDIGKARSSAKIETDFGGFSGSNTMLRIRQAY CCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEE VNLDWGKSAVLVGITWHPLFGAVMPDVLNLSTGAPFQPFNRSPQIRYQYKANSRVQLTAS EECCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEEHH VLWQLQYLSSGPKGMSEDYIKNSCIPEMFVGADFTPADGWLMGLGAHMISLKPRTSTEWK HHHHHHHHCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCEEECCCEEEEECCCCCCCHH EQTFKVNERMTAFSYEAHLKYSGRNYTFAAKTLMASALDHTALLGGYGVSSVDSRTGEQG HHHEECCCCEEEEEEEEEEEECCCCEEEHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCC YTPFRHSTTWVNFAYGTKWRPGVFVGYTKNLGTGKSLVSADKVYGMGLDIDQLITVSLNV CCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHEEECCCCHHHEEEEEEEE SYNLPHWKFGFEYCPATAYYGTTDLESGRIEQTHAITNHRILGLMMYYF EECCCCCCCCCEECCCEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHCC >Mature Secondary Structure MRRITLLLVGMLALFSTTAQRKNFTYKFYGFVRGDLFYNSRANMAPIDGNFYLYPLDKSF CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCCCCCEECCCEEEEECCCCC DADGKDLNATPNGSFYTFTSRLGLDVTGPDIGKARSSAKIETDFGGFSGSNTMLRIRQAY CCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEE VNLDWGKSAVLVGITWHPLFGAVMPDVLNLSTGAPFQPFNRSPQIRYQYKANSRVQLTAS EECCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEEHH VLWQLQYLSSGPKGMSEDYIKNSCIPEMFVGADFTPADGWLMGLGAHMISLKPRTSTEWK HHHHHHHHCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCEEECCCEEEEECCCCCCCHH EQTFKVNERMTAFSYEAHLKYSGRNYTFAAKTLMASALDHTALLGGYGVSSVDSRTGEQG HHHEECCCCEEEEEEEEEEEECCCCEEEHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCC YTPFRHSTTWVNFAYGTKWRPGVFVGYTKNLGTGKSLVSADKVYGMGLDIDQLITVSLNV CCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHEEECCCCHHHEEEEEEEE SYNLPHWKFGFEYCPATAYYGTTDLESGRIEQTHAITNHRILGLMMYYF EECCCCCCCCCEECCCEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA