| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009800
Identifier: 150009800
GI number: 150009800
Start: 3894320
End: 3896182
Strand: Direct
Name: 150009800
Synonym: BDI_3216
Alternate gene names: NA
Gene position: 3894320-3896182 (Clockwise)
Preceding gene: 150009799
Following gene: 150009801
Centisome position: 80.94
GC content: 46.22
Gene sequence:
>1863_bases ATGAATGAGAAATGTAATTTAGTTACAGTTCTGTTACTTTGTTGCCTTATTTTTCCCGGGAATGCTCAAGAGTTTAATTG GCAAGACTTGGTGAACCGTAAGCAATATGCGGCTGTGATCGCTCATGCTGATAGCCTTACATTAGCCGATTCTTCGAATT ATGAGATTATGAACGCTATCGGGCAGGCTTATGAGGGTATGCTTCGGTATCAGAAGGCTTATGACTATTACCGTCTTTGC TTTTCTATGGATACGACGAACTTGGATATCTTAAACATCTTGGCTCGGACGGCGACGAACTTAGGCCGTGCGGAGGATGC CGAGCGATATTTTCATCAGGTCTTATCCGCCGATAGCTCGAACTTCTACGCTAATTATCAGTTGGCACGTCTGTATTTCC AATTGGGGGAGTATGAGAAAGCAGTTGATGCCTATGAGAAATTGCAAGCTCAGAATGAGGATAATACTGTCTTATACCGT GCGATTGGCGATTGCTATACTCGAATGGAACAATATCCTTCCGCTACGACCGCTTATTTTCAGGCGTATAACTTGAATCG TGAGAATGCGGGGTTGGCGGTTGCGTTAGTGAATTCATTGTATCGGATGGGGGCTAGTAGCCCGGATTATATATCGGAAG GAATAGCGATTTGCGATACCGCCTTGTTTTATAATCCCGGGAATCGTCAATTATTGCGTAGTAAAGGATTGGGGCTATAT ATCGTGAAACAATTTGTTCAGGCGGATTCTGTCTATTCCAGTTTGTTGGCTGATGGTGATTCCACCTACCTTACCTTGAA ATATGGGGGAGCCTCGAAGTATTATGCCGGTCTGTATATGCCCTCGGTAGATATCTTGGATATGGCATATGAGCAGGATA CGACCTCGGTCGAGGTATGCCTCTTATTGGGTTCCGCCTTGGGTAAGACGTATGACCGGAAGCGGGCTTACGACTTATTT GACCGGGCGGAAAAGGGATTGGAACCCAATCGTTTCTTGGTAAATCAATTATTGGCCTTCCGTGCGGAGACTTACCAAAA AGACGGGAGATACAAGGAAGCGTCCCGTCTCTACTATGAGGCATGGAAGAAGAATCCGGAACGACTGGATTTCCTAGCGG CGATCTCGCATATGTATAGTGAGATTGACGTGTCTAAATTCCAGAGCGAAGAGGATCGTCAGCGAGGGCTTTTTATCTTG GTACTTTATATGAATGAGAGCTTAAAGAAAAAAGCGGACGAGAGGACGATGGTGTTTAGCCGGGCGCTTCTGCAATCCTT CTATGAGGATATGTTCTTCCGTAATGTGGCGGAGGAGACTATGATGGACCCGGATGGGAAAAAGAGCAAGATCTCTATCG TGGATTTGCGTAACCTGATCAATCAATTGCCGGAGGAATCGGAGATGGTCATGGAGATTCGTGCCATGAGCGCCAGAAGC TCGGGTAAGATAGAGGAGGCGGCCCGTCTGCTTTATCGGGCGTGGAAGGTGAAGGGTACTCGTGTAGAATTGCTTCGTGA GATCGCGAACCTATATAGCCATCCGGATATCTCCGGATTCAAGAATGCGGAGGAGCTACAGAGAGGTGTATTCGCTCAAG TGACTTACGCAAAGGAACTGTTGAAAAACGAGTCGGATCTGAGTAACTTGACTTTTACCCGGCCTTTCTTGGAGTCATTA AATTCGGATATGTCCAAACGGGGTATCACGGAGCAAACCATGCTGGCTCCAGATAACCGGAAAAGCCAGCTTTCTATAGA TGAACTCCAATCTCTGATCCAACAACTGCCGGAGACATCCGATGAGGTAAAAGAGATGATACGGATGATGAACAAAGAGA AAGCGCTAAAGAGCAAGAAATGA
Upstream 100 bases:
>100_bases TCCGCGTCTTATATACGGTGCCTATTACTTTCCGGTTACAGTGAAATAAGAATAGAGGCTATGTTGGTCGCTTAATCAGT AATCTTAAAAACATACAGAT
Downstream 100 bases:
>100_bases CATCGAACGAAAGACTTTAAACATTATGAAAATGAGAAAATTAACTACGAACGCAGTGGCTATGCTGCTCGCTTTAGTCG GATGTATGGGATGTGGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Protein
Number of amino acids: Translated: 620; Mature: 620
Protein sequence:
>620_residues MNEKCNLVTVLLLCCLIFPGNAQEFNWQDLVNRKQYAAVIAHADSLTLADSSNYEIMNAIGQAYEGMLRYQKAYDYYRLC FSMDTTNLDILNILARTATNLGRAEDAERYFHQVLSADSSNFYANYQLARLYFQLGEYEKAVDAYEKLQAQNEDNTVLYR AIGDCYTRMEQYPSATTAYFQAYNLNRENAGLAVALVNSLYRMGASSPDYISEGIAICDTALFYNPGNRQLLRSKGLGLY IVKQFVQADSVYSSLLADGDSTYLTLKYGGASKYYAGLYMPSVDILDMAYEQDTTSVEVCLLLGSALGKTYDRKRAYDLF DRAEKGLEPNRFLVNQLLAFRAETYQKDGRYKEASRLYYEAWKKNPERLDFLAAISHMYSEIDVSKFQSEEDRQRGLFIL VLYMNESLKKKADERTMVFSRALLQSFYEDMFFRNVAEETMMDPDGKKSKISIVDLRNLINQLPEESEMVMEIRAMSARS SGKIEEAARLLYRAWKVKGTRVELLREIANLYSHPDISGFKNAEELQRGVFAQVTYAKELLKNESDLSNLTFTRPFLESL NSDMSKRGITEQTMLAPDNRKSQLSIDELQSLIQQLPETSDEVKEMIRMMNKEKALKSKK
Sequences:
>Translated_620_residues MNEKCNLVTVLLLCCLIFPGNAQEFNWQDLVNRKQYAAVIAHADSLTLADSSNYEIMNAIGQAYEGMLRYQKAYDYYRLC FSMDTTNLDILNILARTATNLGRAEDAERYFHQVLSADSSNFYANYQLARLYFQLGEYEKAVDAYEKLQAQNEDNTVLYR AIGDCYTRMEQYPSATTAYFQAYNLNRENAGLAVALVNSLYRMGASSPDYISEGIAICDTALFYNPGNRQLLRSKGLGLY IVKQFVQADSVYSSLLADGDSTYLTLKYGGASKYYAGLYMPSVDILDMAYEQDTTSVEVCLLLGSALGKTYDRKRAYDLF DRAEKGLEPNRFLVNQLLAFRAETYQKDGRYKEASRLYYEAWKKNPERLDFLAAISHMYSEIDVSKFQSEEDRQRGLFIL VLYMNESLKKKADERTMVFSRALLQSFYEDMFFRNVAEETMMDPDGKKSKISIVDLRNLINQLPEESEMVMEIRAMSARS SGKIEEAARLLYRAWKVKGTRVELLREIANLYSHPDISGFKNAEELQRGVFAQVTYAKELLKNESDLSNLTFTRPFLESL NSDMSKRGITEQTMLAPDNRKSQLSIDELQSLIQQLPETSDEVKEMIRMMNKEKALKSKK >Mature_620_residues MNEKCNLVTVLLLCCLIFPGNAQEFNWQDLVNRKQYAAVIAHADSLTLADSSNYEIMNAIGQAYEGMLRYQKAYDYYRLC FSMDTTNLDILNILARTATNLGRAEDAERYFHQVLSADSSNFYANYQLARLYFQLGEYEKAVDAYEKLQAQNEDNTVLYR AIGDCYTRMEQYPSATTAYFQAYNLNRENAGLAVALVNSLYRMGASSPDYISEGIAICDTALFYNPGNRQLLRSKGLGLY IVKQFVQADSVYSSLLADGDSTYLTLKYGGASKYYAGLYMPSVDILDMAYEQDTTSVEVCLLLGSALGKTYDRKRAYDLF DRAEKGLEPNRFLVNQLLAFRAETYQKDGRYKEASRLYYEAWKKNPERLDFLAAISHMYSEIDVSKFQSEEDRQRGLFIL VLYMNESLKKKADERTMVFSRALLQSFYEDMFFRNVAEETMMDPDGKKSKISIVDLRNLINQLPEESEMVMEIRAMSARS SGKIEEAARLLYRAWKVKGTRVELLREIANLYSHPDISGFKNAEELQRGVFAQVTYAKELLKNESDLSNLTFTRPFLESL NSDMSKRGITEQTMLAPDNRKSQLSIDELQSLIQQLPETSDEVKEMIRMMNKEKALKSKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71107; Mature: 71107
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEKCNLVTVLLLCCLIFPGNAQEFNWQDLVNRKQYAAVIAHADSLTLADSSNYEIMNAI CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEECCCEEECCCCCHHHHHHH GQAYEGMLRYQKAYDYYRLCFSMDTTNLDILNILARTATNLGRAEDAERYFHQVLSADSS HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC NFYANYQLARLYFQLGEYEKAVDAYEKLQAQNEDNTVLYRAIGDCYTRMEQYPSATTAYF CCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHH QAYNLNRENAGLAVALVNSLYRMGASSPDYISEGIAICDTALFYNPGNRQLLRSKGLGLY HHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHEECCCCHHHHHHCCCHHH IVKQFVQADSVYSSLLADGDSTYLTLKYGGASKYYAGLYMPSVDILDMAYEQDTTSVEVC HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEHEEECCCHHHHHHHHCCCCCHHHHH LLLGSALGKTYDRKRAYDLFDRAEKGLEPNRFLVNQLLAFRAETYQKDGRYKEASRLYYE HHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AWKKNPERLDFLAAISHMYSEIDVSKFQSEEDRQRGLFILVLYMNESLKKKADERTMVFS HHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEEEECCCHHHHHHHHHHHHHH RALLQSFYEDMFFRNVAEETMMDPDGKKSKISIVDLRNLINQLPEESEMVMEIRAMSARS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHCCC SGKIEEAARLLYRAWKVKGTRVELLREIANLYSHPDISGFKNAEELQRGVFAQVTYAKEL CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH LKNESDLSNLTFTRPFLESLNSDMSKRGITEQTMLAPDNRKSQLSIDELQSLIQQLPETS HCCCCCCCCCEEHHHHHHHHCCHHHHCCCCHHHEECCCCCCCCCCHHHHHHHHHHCCCCH DEVKEMIRMMNKEKALKSKK HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNEKCNLVTVLLLCCLIFPGNAQEFNWQDLVNRKQYAAVIAHADSLTLADSSNYEIMNAI CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEECCCEEECCCCCHHHHHHH GQAYEGMLRYQKAYDYYRLCFSMDTTNLDILNILARTATNLGRAEDAERYFHQVLSADSS HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC NFYANYQLARLYFQLGEYEKAVDAYEKLQAQNEDNTVLYRAIGDCYTRMEQYPSATTAYF CCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHH QAYNLNRENAGLAVALVNSLYRMGASSPDYISEGIAICDTALFYNPGNRQLLRSKGLGLY HHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHEECCCCHHHHHHCCCHHH IVKQFVQADSVYSSLLADGDSTYLTLKYGGASKYYAGLYMPSVDILDMAYEQDTTSVEVC HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEHEEECCCHHHHHHHHCCCCCHHHHH LLLGSALGKTYDRKRAYDLFDRAEKGLEPNRFLVNQLLAFRAETYQKDGRYKEASRLYYE HHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AWKKNPERLDFLAAISHMYSEIDVSKFQSEEDRQRGLFILVLYMNESLKKKADERTMVFS HHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEEEECCCHHHHHHHHHHHHHH RALLQSFYEDMFFRNVAEETMMDPDGKKSKISIVDLRNLINQLPEESEMVMEIRAMSARS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHCCC SGKIEEAARLLYRAWKVKGTRVELLREIANLYSHPDISGFKNAEELQRGVFAQVTYAKEL CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH LKNESDLSNLTFTRPFLESLNSDMSKRGITEQTMLAPDNRKSQLSIDELQSLIQQLPETS HCCCCCCCCCEEHHHHHHHHCCHHHHCCCCHHHEECCCCCCCCCCHHHHHHHHHHCCCCH DEVKEMIRMMNKEKALKSKK HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA