| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009799
Identifier: 150009799
GI number: 150009799
Start: 3892440
End: 3894263
Strand: Direct
Name: 150009799
Synonym: BDI_3215
Alternate gene names: NA
Gene position: 3892440-3894263 (Clockwise)
Preceding gene: 150009798
Following gene: 150009800
Centisome position: 80.9
GC content: 47.64
Gene sequence:
>1824_bases ATGACACCGGAATTTGCCTACTTATTGAAGGTAAATGTAGCCTTTGTACTCTTTTACGCCTTCTACCGGTTGTTCTTCTA TAAGGACACGTTCTTCAAGCTACGTCGTGCGATATTGCTGGCGTTCTTTGGCTTGGCTCTGTTTTATCCTTTGCTGAACA TCCAAGATTGGGTAAGGCAACAAGAGCCTATAGCAGATGTGATTTATATGTATTCCGCTATGTTGCCTGAGGCGACGGCG AAAGCGGATGCCGCGGCGTCCGTGGATTGGTATGGATGGTTGCTGGGATCTTTGGGGTTTATTTATTGGGGGATCGTAGC GTTCTTATGCGGACGTTTTCTCGTGCAATTAAGCAGTATCTTATGGTTGGCTCATACCAGTGAGCGTGTTGTTATTCATG AAACTCCGGTTTATGCGTTGCGGAAGGCCGCCGGGCCATTCTCCTTTTTCCGTATGGTCTTCTTGCATCCGGAGAGTCAT TCGGATAAGGAAACGGATGAGATATTGACACATGAATGTACGCACGTATCCCAATGGCACTCGATTGACGTGATCTTGAG CGAGATGATGTGTATGGCTTGCTGGTTTAATCCTTTTGTATGGTTATTGAAGCGTGAGGTTAGGCATAATCTGGAGTATC TGGCGGATAACACGGTGATCCAGTCTGGTTACGATAGTAAGAGCTATCAATACCATTTATTGGGATTGGCTCATCATCAG TCCGTTACTACTTTGTATAATAGTTTCAATGTGCTGCATCTGAAGAACCGGATTATGATGATGAACAAGAAGCGGAGCCC GGGTATCGTACGTACGAAATATCTGATATTTATTCCATTGGTAGGGATCTTGATGCTGTTAAGTAATATCGAGGCGGTAG CCCGTTTGACTGTCCGTCTGGCGAATGAGGCTACGGTCTCGAACGCTATGGTGACGGCTACGGGCATTCTGGTTGATGAG ACCGGGCAGCCTTTGATCGGGGCATCAGTTGTGGTGAAGGGCGGTAAAGAGAGGACTATCACGGATAGGAAAGGGGCTTT CTCTTTGGAGGTCCCTGCGAATGCGATTTTGCGATGCAGCTATCAAGGAAGGGAGTCTCAAGAGGTCTTGGCTGCTGATA TGACAAATAATACCCATTTGTCCTTATCTTCCAAATCCCGTGAGATGAACGAGCAAGTATTTACCGTGGTAGAGAAGATG CCTAGTTTTCCGGGTGGGGATGCGGAGTTGTTGAAATACATAGCCACGAATATAAAGTATCCGAAAGAGAGTCAGGATAA CGGGGAGCAAGGGCGTGTAATCTGCTCGTTTATCGTTGGGCGTGATGGTTCCGTCAATAATCCGGAGGTGCTTCGGGGAG TGACTCCTTTATTGAATGAGGAGGCCGTAAGGGTAATAAACACTATGCCTCGTTGGAATCCGGGAATGCAACGTGGAAAG GCGGTCGCCGTGAAATATACGGTCCCGATTACGTTCCGTTTGAAAAGTCCGGTAGAAGAAGCGAAGGAAGAGACTTTGAC GGTAGTGGACGTGATGCCGCAATATCCCGGAGGGGATCGTGAATTATTGAAGTTTATCGCTCAAAGCATAAAGTATCCGA CAGATGCGCAGGAAGCGGGAGTGCAAGGTCGTGTGATCTGTTCGTTTGTAGTAGATAAGAAAGGAAATATCGTGGAACCT AAAATCATACGGGGGATAGATCCCTCTTTGGATGCGGAAGCTTTGCGAGTCATCGGAATGATGCCCCGGTGGACTCCCGG TCGTCAGGACGGAAAGGCGGTCCGCGTCTTATATACGGTGCCTATTACTTTCCGGTTACAGTGA
Upstream 100 bases:
>100_bases TTTCTTTCTTTGCGAAAGATCAGAAAATCTCTACGGATGATCTAAAGGATATCATCGATTTGATTGAGAAAGGAAAAGAA TAACCTAAATCCCACATACC
Downstream 100 bases:
>100_bases AATAAGAATAGAGGCTATGTTGGTCGCTTAATCAGTAATCTTAAAAACATACAGATATGAATGAGAAATGTAATTTAGTT ACAGTTCTGTTACTTTGTTG
Product: TonB
Products: NA
Alternate protein names: NB Protein; Peptidase; Conserved Transporter; Outer Membrane Protein nB; Nb Family Protein; NB-Dependent Receptor; BlaR1 Peptidase M; BlaR1 Peptidase; Outer Membrane Transport Energization Protein nb; Peptidase M; Transcriptional Regulator; NB Family C-Terminal Domain Protein; Cytochrome C Biogenesis; Outer Membrane Protein; NB Family Outer Membrane Receptor Protein; Antirepressor; NB-Related Protein; LOW QUALITY PROTEIN Outer Membrane Protein; Protein nB
Number of amino acids: Translated: 607; Mature: 606
Protein sequence:
>607_residues MTPEFAYLLKVNVAFVLFYAFYRLFFYKDTFFKLRRAILLAFFGLALFYPLLNIQDWVRQQEPIADVIYMYSAMLPEATA KADAAASVDWYGWLLGSLGFIYWGIVAFLCGRFLVQLSSILWLAHTSERVVIHETPVYALRKAAGPFSFFRMVFLHPESH SDKETDEILTHECTHVSQWHSIDVILSEMMCMACWFNPFVWLLKREVRHNLEYLADNTVIQSGYDSKSYQYHLLGLAHHQ SVTTLYNSFNVLHLKNRIMMMNKKRSPGIVRTKYLIFIPLVGILMLLSNIEAVARLTVRLANEATVSNAMVTATGILVDE TGQPLIGASVVVKGGKERTITDRKGAFSLEVPANAILRCSYQGRESQEVLAADMTNNTHLSLSSKSREMNEQVFTVVEKM PSFPGGDAELLKYIATNIKYPKESQDNGEQGRVICSFIVGRDGSVNNPEVLRGVTPLLNEEAVRVINTMPRWNPGMQRGK AVAVKYTVPITFRLKSPVEEAKEETLTVVDVMPQYPGGDRELLKFIAQSIKYPTDAQEAGVQGRVICSFVVDKKGNIVEP KIIRGIDPSLDAEALRVIGMMPRWTPGRQDGKAVRVLYTVPITFRLQ
Sequences:
>Translated_607_residues MTPEFAYLLKVNVAFVLFYAFYRLFFYKDTFFKLRRAILLAFFGLALFYPLLNIQDWVRQQEPIADVIYMYSAMLPEATA KADAAASVDWYGWLLGSLGFIYWGIVAFLCGRFLVQLSSILWLAHTSERVVIHETPVYALRKAAGPFSFFRMVFLHPESH SDKETDEILTHECTHVSQWHSIDVILSEMMCMACWFNPFVWLLKREVRHNLEYLADNTVIQSGYDSKSYQYHLLGLAHHQ SVTTLYNSFNVLHLKNRIMMMNKKRSPGIVRTKYLIFIPLVGILMLLSNIEAVARLTVRLANEATVSNAMVTATGILVDE TGQPLIGASVVVKGGKERTITDRKGAFSLEVPANAILRCSYQGRESQEVLAADMTNNTHLSLSSKSREMNEQVFTVVEKM PSFPGGDAELLKYIATNIKYPKESQDNGEQGRVICSFIVGRDGSVNNPEVLRGVTPLLNEEAVRVINTMPRWNPGMQRGK AVAVKYTVPITFRLKSPVEEAKEETLTVVDVMPQYPGGDRELLKFIAQSIKYPTDAQEAGVQGRVICSFVVDKKGNIVEP KIIRGIDPSLDAEALRVIGMMPRWTPGRQDGKAVRVLYTVPITFRLQ >Mature_606_residues TPEFAYLLKVNVAFVLFYAFYRLFFYKDTFFKLRRAILLAFFGLALFYPLLNIQDWVRQQEPIADVIYMYSAMLPEATAK ADAAASVDWYGWLLGSLGFIYWGIVAFLCGRFLVQLSSILWLAHTSERVVIHETPVYALRKAAGPFSFFRMVFLHPESHS DKETDEILTHECTHVSQWHSIDVILSEMMCMACWFNPFVWLLKREVRHNLEYLADNTVIQSGYDSKSYQYHLLGLAHHQS VTTLYNSFNVLHLKNRIMMMNKKRSPGIVRTKYLIFIPLVGILMLLSNIEAVARLTVRLANEATVSNAMVTATGILVDET GQPLIGASVVVKGGKERTITDRKGAFSLEVPANAILRCSYQGRESQEVLAADMTNNTHLSLSSKSREMNEQVFTVVEKMP SFPGGDAELLKYIATNIKYPKESQDNGEQGRVICSFIVGRDGSVNNPEVLRGVTPLLNEEAVRVINTMPRWNPGMQRGKA VAVKYTVPITFRLKSPVEEAKEETLTVVDVMPQYPGGDRELLKFIAQSIKYPTDAQEAGVQGRVICSFVVDKKGNIVEPK IIRGIDPSLDAEALRVIGMMPRWTPGRQDGKAVRVLYTVPITFRLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68566; Mature: 68434
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPEFAYLLKVNVAFVLFYAFYRLFFYKDTFFKLRRAILLAFFGLALFYPLLNIQDWVRQ CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHC QEPIADVIYMYSAMLPEATAKADAAASVDWYGWLLGSLGFIYWGIVAFLCGRFLVQLSSI CCCHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWLAHTSERVVIHETPVYALRKAAGPFSFFRMVFLHPESHSDKETDEILTHECTHVSQWH HHEEECCCEEEEECCCHHHHHHCCCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHH SIDVILSEMMCMACWFNPFVWLLKREVRHNLEYLADNTVIQSGYDSKSYQYHLLGLAHHQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEEEHHHH SVTTLYNSFNVLHLKNRIMMMNKKRSPGIVRTKYLIFIPLVGILMLLSNIEAVARLTVRL HHHHHHHCCCEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANEATVSNAMVTATGILVDETGQPLIGASVVVKGGKERTITDRKGAFSLEVPANAILRCS CCCHHHCCEEEEEEEEEEECCCCCCCCCEEEEECCCCCCEECCCCCEEEECCCCEEEEEC YQGRESQEVLAADMTNNTHLSLSSKSREMNEQVFTVVEKMPSFPGGDAELLKYIATNIKY CCCCCCHHHHEEECCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC PKESQDNGEQGRVICSFIVGRDGSVNNPEVLRGVTPLLNEEAVRVINTMPRWNPGMQRGK CCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC AVAVKYTVPITFRLKSPVEEAKEETLTVVDVMPQYPGGDRELLKFIAQSIKYPTDAQEAG EEEEEEEEEEEEEECCHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHCC VQGRVICSFVVDKKGNIVEPKIIRGIDPSLDAEALRVIGMMPRWTPGRQDGKAVRVLYTV CCCEEEEEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEE PITFRLQ EEEEEEC >Mature Secondary Structure TPEFAYLLKVNVAFVLFYAFYRLFFYKDTFFKLRRAILLAFFGLALFYPLLNIQDWVRQ CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHC QEPIADVIYMYSAMLPEATAKADAAASVDWYGWLLGSLGFIYWGIVAFLCGRFLVQLSSI CCCHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWLAHTSERVVIHETPVYALRKAAGPFSFFRMVFLHPESHSDKETDEILTHECTHVSQWH HHEEECCCEEEEECCCHHHHHHCCCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHH SIDVILSEMMCMACWFNPFVWLLKREVRHNLEYLADNTVIQSGYDSKSYQYHLLGLAHHQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEEEHHHH SVTTLYNSFNVLHLKNRIMMMNKKRSPGIVRTKYLIFIPLVGILMLLSNIEAVARLTVRL HHHHHHHCCCEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANEATVSNAMVTATGILVDETGQPLIGASVVVKGGKERTITDRKGAFSLEVPANAILRCS CCCHHHCCEEEEEEEEEEECCCCCCCCCEEEEECCCCCCEECCCCCEEEECCCCEEEEEC YQGRESQEVLAADMTNNTHLSLSSKSREMNEQVFTVVEKMPSFPGGDAELLKYIATNIKY CCCCCCHHHHEEECCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC PKESQDNGEQGRVICSFIVGRDGSVNNPEVLRGVTPLLNEEAVRVINTMPRWNPGMQRGK CCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC AVAVKYTVPITFRLKSPVEEAKEETLTVVDVMPQYPGGDRELLKFIAQSIKYPTDAQEAG EEEEEEEEEEEEEECCHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHCC VQGRVICSFVVDKKGNIVEPKIIRGIDPSLDAEALRVIGMMPRWTPGRQDGKAVRVLYTV CCCEEEEEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEE PITFRLQ EEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA