| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150009694
Identifier: 150009694
GI number: 150009694
Start: 3734789
End: 3735793
Strand: Direct
Name: 150009694
Synonym: BDI_3109
Alternate gene names: NA
Gene position: 3734789-3735793 (Clockwise)
Preceding gene: 150009693
Following gene: 150009695
Centisome position: 77.62
GC content: 41.09
Gene sequence:
>1005_bases ATGAGAAAAACGTATACACATATCGAATTATTGGATCGCTTTATGAGTGGTAAGACTTCACCGGAAGAAGAGCGAACTCT TTTGGCGTGGTTTAGCGATTCCGATCATAAGGAAGAGATCATGGCTTTTTATATGTCTAGATGGGAAGAATCTTCCGGGA AAAAGCTTCCTCCTAAGCTACAAGGACAGATGTTCTGTGAGATTAAAAAGCGGATAAGACAAGAGAAGAAAACTTTGGAG ATAAAGAAGAAACCGCATACCTTATGGAAGTGGCTTTCTTATGCGGCGGTGGCATTCGTATGTATAAGCCTTGGAATTGG TTCACATTGGTATTATATGAGACAGGTTCCATTATCCGATCCATTGGATTATGTGGTGTCAGCAGATAATGGGCAACGTG CTAGCGTGGTTCTGCCTGATGGGACGAAAGTATGGTTAAATTCGCATACTAAACTTAATTATAAGAGTGATTATGGCGTG AAAGAAAGATCAGTTTCTTTATCTGGTGAGGCTTATTTTGAAGTTTCGAAAGATACATTGCGCCGTTTCTTGGTAAATGC GGGGGATATGGAAGTCGAGGCGCTAGGCACAGCTTTTAATGTGAAGGCGTATGAGGAAGATGACGAGGTGGTTACGACCT TGTTTGAAGGCAGTGTACGAACAGTGGTTGGAAAAGAGTTTGTGATTCTGTCTCCGGATGAGAGTGCGGTTTTTAATAAG TCTAGTCATATATTATCTGTTAATCACCCGACAAATGCTTCTTATGCCCGTCTTTGGCGTACGAATGAACTGGCCTTCTC TGGCGAGTCGTTGGAGGAGATCGCGGTATTGTTGAATCGAATGTATAATGTTGAAGTTCGTTTTTTGTCCAATAAGATTA AAGGCTACAGTTTCTCGGGGGTGATCCGGAATAATAGTCTGGATAATGTATTTGAAATAATAAGCCTTACGGCTCCGATT ACGTATGTGTCGGTAGGTGATACTATTTATTTAAATGAGAAATAG
Upstream 100 bases:
>100_bases AGGCGGAAAATAAGTATGATATTAATTTGTGTTAAATCATGGATCTCTCGATTTTTTTGTGTAAGGGTAAAGCTCTTCTT CGGGATATACTTATTACACG
Downstream 100 bases:
>100_bases AAAGTTGAGTGTTAACCTAATAAAGAAGAAGCCTATGAGATGAGCTAGATGATTGTAGTAAAAAAAGAAGAAAGGCAAGG CCCTTCTTCCTCTTAAGCAA
Product: putative anti-sigma factor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MRKTYTHIELLDRFMSGKTSPEEERTLLAWFSDSDHKEEIMAFYMSRWEESSGKKLPPKLQGQMFCEIKKRIRQEKKTLE IKKKPHTLWKWLSYAAVAFVCISLGIGSHWYYMRQVPLSDPLDYVVSADNGQRASVVLPDGTKVWLNSHTKLNYKSDYGV KERSVSLSGEAYFEVSKDTLRRFLVNAGDMEVEALGTAFNVKAYEEDDEVVTTLFEGSVRTVVGKEFVILSPDESAVFNK SSHILSVNHPTNASYARLWRTNELAFSGESLEEIAVLLNRMYNVEVRFLSNKIKGYSFSGVIRNNSLDNVFEIISLTAPI TYVSVGDTIYLNEK
Sequences:
>Translated_334_residues MRKTYTHIELLDRFMSGKTSPEEERTLLAWFSDSDHKEEIMAFYMSRWEESSGKKLPPKLQGQMFCEIKKRIRQEKKTLE IKKKPHTLWKWLSYAAVAFVCISLGIGSHWYYMRQVPLSDPLDYVVSADNGQRASVVLPDGTKVWLNSHTKLNYKSDYGV KERSVSLSGEAYFEVSKDTLRRFLVNAGDMEVEALGTAFNVKAYEEDDEVVTTLFEGSVRTVVGKEFVILSPDESAVFNK SSHILSVNHPTNASYARLWRTNELAFSGESLEEIAVLLNRMYNVEVRFLSNKIKGYSFSGVIRNNSLDNVFEIISLTAPI TYVSVGDTIYLNEK >Mature_334_residues MRKTYTHIELLDRFMSGKTSPEEERTLLAWFSDSDHKEEIMAFYMSRWEESSGKKLPPKLQGQMFCEIKKRIRQEKKTLE IKKKPHTLWKWLSYAAVAFVCISLGIGSHWYYMRQVPLSDPLDYVVSADNGQRASVVLPDGTKVWLNSHTKLNYKSDYGV KERSVSLSGEAYFEVSKDTLRRFLVNAGDMEVEALGTAFNVKAYEEDDEVVTTLFEGSVRTVVGKEFVILSPDESAVFNK SSHILSVNHPTNASYARLWRTNELAFSGESLEEIAVLLNRMYNVEVRFLSNKIKGYSFSGVIRNNSLDNVFEIISLTAPI TYVSVGDTIYLNEK
Specific function: Unknown
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38184; Mature: 38184
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTYTHIELLDRFMSGKTSPEEERTLLAWFSDSDHKEEIMAFYMSRWEESSGKKLPPKL CCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHH QGQMFCEIKKRIRQEKKTLEIKKKPHTLWKWLSYAAVAFVCISLGIGSHWYYMRQVPLSD CCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC PLDYVVSADNGQRASVVLPDGTKVWLNSHTKLNYKSDYGVKERSVSLSGEAYFEVSKDTL CCCEEEECCCCCEEEEEECCCCEEEEECCEEEEECCCCCCCCCEEEECCCEEEEECHHHH RRFLVNAGDMEVEALGTAFNVKAYEEDDEVVTTLFEGSVRTVVGKEFVILSPDESAVFNK HHHHHCCCCEEEEEECCEEEEEEECCCHHHHHHHHCCCEEEEECCEEEEECCCCCCEECC SSHILSVNHPTNASYARLWRTNELAFSGESLEEIAVLLNRMYNVEVRFLSNKIKGYSFSG CCCEEEECCCCCCCHHHEEECCCEEECCCCHHHHHHHHHHHHCEEEEEEECCCCCEEEEE VIRNNSLDNVFEIISLTAPITYVSVGDTIYLNEK EEECCCHHHHHHHHHHHCCEEEEEECCEEEEECC >Mature Secondary Structure MRKTYTHIELLDRFMSGKTSPEEERTLLAWFSDSDHKEEIMAFYMSRWEESSGKKLPPKL CCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHH QGQMFCEIKKRIRQEKKTLEIKKKPHTLWKWLSYAAVAFVCISLGIGSHWYYMRQVPLSD CCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC PLDYVVSADNGQRASVVLPDGTKVWLNSHTKLNYKSDYGVKERSVSLSGEAYFEVSKDTL CCCEEEECCCCCEEEEEECCCCEEEEECCEEEEECCCCCCCCCEEEECCCEEEEECHHHH RRFLVNAGDMEVEALGTAFNVKAYEEDDEVVTTLFEGSVRTVVGKEFVILSPDESAVFNK HHHHHCCCCEEEEEECCEEEEEEECCCHHHHHHHHCCCEEEEECCEEEEECCCCCCEECC SSHILSVNHPTNASYARLWRTNELAFSGESLEEIAVLLNRMYNVEVRFLSNKIKGYSFSG CCCEEEECCCCCCCHHHEEECCCEEECCCCHHHHHHHHHHHHCEEEEEEECCCCCEEEEE VIRNNSLDNVFEIISLTAPITYVSVGDTIYLNEK EEECCCHHHHHHHHHHHCCEEEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA