Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150009622

Identifier: 150009622

GI number: 150009622

Start: 3634800

End: 3636467

Strand: Direct

Name: 150009622

Synonym: BDI_3036

Alternate gene names: NA

Gene position: 3634800-3636467 (Clockwise)

Preceding gene: 150009619

Following gene: 150009624

Centisome position: 75.55

GC content: 47.96

Gene sequence:

>1668_bases
ATGAAAAAGAAATTTATATATAGCTTTATGATAGCCGCTGCCGCCGCGGCATTTTCTTCCTGTTCTAATTTTTTGGAAGA
GCGTCCTACAGACGCGTTTGATGAGGAGACCGCGTTCCAAAGCCCTACGTTGGTCTATGTAAACACGGTTGCGAGCTTGT
ACAATAATATGTTCAAGATCATGGGTAACGACCGTCATGTATATGACTTGAATACCTTCTCCAGCGATGAGGCTATGCTT
CCTTGCCGTATCGGTGACTGGGAAGATGGCGGTTTATGGCAGAATATTTTCTTACACCGTTGGGGTACGATGAATGATTT
GACCAAGAACTCTTGGGATTTCTTGTATGAGCAGATCGGAAAATGTAACCAGAGTGTTGATAAGTTGCAAGCCTTTGCCG
AGGAACAACCGGACGTGGAATATTTCAAGGTTTATCTGGAAGAGGTCCGTGCGGTCCGTGCGTTTTTCTATTATGAGTTG
TTGGATTTGTTCGCTCGTGTTCCGTTGGTAACTTCCTCTACGACACCGATGTCTGAGGTAAAGCAATCTGAGCGTAGCGT
TGTATTTAACTTTGTCCGTTCGGAGTTGGAGGAGGCGTTGCCTTATCTTTCAGATAACCGCAGTAACCAAAAAGGTGAGT
ATTACGGACGTATTACCAAGCCGGTGGCTTATATGATCTTGGCTAAGTTGGCGTTGAATGCGGAGGTTTATGCGGACGAC
AATTGGACGGACGGCAATCGTCCGGCTGGAAAGAACATCAAGTTTACCGTTGACGGTAAAGAGATGAACGCTTGGGAAGC
TACGATCGCTTATGTGGATAAGCTGGAGGCTTTGGGCTATAAATTGCAGGGAAACTTCTCGGAGAATTTCGCCGTAGCGA
ACGAGACCTCGGTTGAGAATATTTTCACGGTTCCTATGGACCCGGTCGCTTATCCGGACGCTAAGGACTACAATTTGGTA
CGTACCCGCCATTATGATCATGCAACCGCTTACGGCCAATCCGGATGGAATGGCTCTTGCGCTACGGTGAAGGCGATGAA
CGTGTTTAAGTTCGGTACGGCGGATGAGGATCCTCGTTGTAAGCTTACTTATTTTACGGGCGAGGTAACCGGTCCGGACG
GAAAGACGATCTATACGGAATGGGACGGACAGAAAGTGCCTTTGAAATATGAGCCGAACGCCCCGAAGGTATATATGGAT
GCCTCCGATGGTTTGTTGGTGAAGACCGCCGGAGCTCGTATGGCTAAATATGAGTTCGACCAGAATGCTCAGGATGGTGG
AAACTTGCATGGAAATGACTGCGTGATCTTCCGTTTCGCCGACGCGTTGCTGATGAAGGCGGAAGCCAAGATTCGTCTGG
GACAGAATGGAGACGATGAGGTGAACCAAGTTCGTAACCGTGTAGGCGCCAAACCGCTACAAAACGTAACGCTGGATACG
CTATTAGACGAGCGTATGCTTGAATTAGCTTGGGAAGGCGTACGCCGGCAGGATTTGATCCGTTTCGGCAAGTTTACCGA
GGCTACGGTAGACCGCTATGTAGGCGTGAAACATTTCGCCAGCTCGCTGGATTATCAAGAGGATAAGACGGGATATACAA
CGGTATTCTCCATCTATGCCGATATCCTTAGCCTGAATCCTAACTTGACACAGAATCCGGGATATTAA

Upstream 100 bases:

>100_bases
GATTATAATGACCTAGGTATGGATAACAAACGTTTCTATCCGTTATCCCGTACGTATTCATTAGGTTTGAGTGTTAACTT
CTAAATCCATTTAAAGAGTC

Downstream 100 bases:

>100_bases
TACGATTCATTTTAATCTTTAAGGCTTTATCAGGGGGCTGTCCGTTATTGGGCAGCCCTTTCTTCTTTTTGCTTGATTTT
CCCTAGTATCTTCGGGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; Ragb/Susd Domain Protein; RagB/SusD Domain-Containing Protein; SusD/RagB Family Protein; SusD Family Protein; Lipoprotein; SusD Outer Membrane Protein; RagB/SusD Family Protein

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MKKKFIYSFMIAAAAAAFSSCSNFLEERPTDAFDEETAFQSPTLVYVNTVASLYNNMFKIMGNDRHVYDLNTFSSDEAML
PCRIGDWEDGGLWQNIFLHRWGTMNDLTKNSWDFLYEQIGKCNQSVDKLQAFAEEQPDVEYFKVYLEEVRAVRAFFYYEL
LDLFARVPLVTSSTTPMSEVKQSERSVVFNFVRSELEEALPYLSDNRSNQKGEYYGRITKPVAYMILAKLALNAEVYADD
NWTDGNRPAGKNIKFTVDGKEMNAWEATIAYVDKLEALGYKLQGNFSENFAVANETSVENIFTVPMDPVAYPDAKDYNLV
RTRHYDHATAYGQSGWNGSCATVKAMNVFKFGTADEDPRCKLTYFTGEVTGPDGKTIYTEWDGQKVPLKYEPNAPKVYMD
ASDGLLVKTAGARMAKYEFDQNAQDGGNLHGNDCVIFRFADALLMKAEAKIRLGQNGDDEVNQVRNRVGAKPLQNVTLDT
LLDERMLELAWEGVRRQDLIRFGKFTEATVDRYVGVKHFASSLDYQEDKTGYTTVFSIYADILSLNPNLTQNPGY

Sequences:

>Translated_555_residues
MKKKFIYSFMIAAAAAAFSSCSNFLEERPTDAFDEETAFQSPTLVYVNTVASLYNNMFKIMGNDRHVYDLNTFSSDEAML
PCRIGDWEDGGLWQNIFLHRWGTMNDLTKNSWDFLYEQIGKCNQSVDKLQAFAEEQPDVEYFKVYLEEVRAVRAFFYYEL
LDLFARVPLVTSSTTPMSEVKQSERSVVFNFVRSELEEALPYLSDNRSNQKGEYYGRITKPVAYMILAKLALNAEVYADD
NWTDGNRPAGKNIKFTVDGKEMNAWEATIAYVDKLEALGYKLQGNFSENFAVANETSVENIFTVPMDPVAYPDAKDYNLV
RTRHYDHATAYGQSGWNGSCATVKAMNVFKFGTADEDPRCKLTYFTGEVTGPDGKTIYTEWDGQKVPLKYEPNAPKVYMD
ASDGLLVKTAGARMAKYEFDQNAQDGGNLHGNDCVIFRFADALLMKAEAKIRLGQNGDDEVNQVRNRVGAKPLQNVTLDT
LLDERMLELAWEGVRRQDLIRFGKFTEATVDRYVGVKHFASSLDYQEDKTGYTTVFSIYADILSLNPNLTQNPGY
>Mature_555_residues
MKKKFIYSFMIAAAAAAFSSCSNFLEERPTDAFDEETAFQSPTLVYVNTVASLYNNMFKIMGNDRHVYDLNTFSSDEAML
PCRIGDWEDGGLWQNIFLHRWGTMNDLTKNSWDFLYEQIGKCNQSVDKLQAFAEEQPDVEYFKVYLEEVRAVRAFFYYEL
LDLFARVPLVTSSTTPMSEVKQSERSVVFNFVRSELEEALPYLSDNRSNQKGEYYGRITKPVAYMILAKLALNAEVYADD
NWTDGNRPAGKNIKFTVDGKEMNAWEATIAYVDKLEALGYKLQGNFSENFAVANETSVENIFTVPMDPVAYPDAKDYNLV
RTRHYDHATAYGQSGWNGSCATVKAMNVFKFGTADEDPRCKLTYFTGEVTGPDGKTIYTEWDGQKVPLKYEPNAPKVYMD
ASDGLLVKTAGARMAKYEFDQNAQDGGNLHGNDCVIFRFADALLMKAEAKIRLGQNGDDEVNQVRNRVGAKPLQNVTLDT
LLDERMLELAWEGVRRQDLIRFGKFTEATVDRYVGVKHFASSLDYQEDKTGYTTVFSIYADILSLNPNLTQNPGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62956; Mature: 62956

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKFIYSFMIAAAAAAFSSCSNFLEERPTDAFDEETAFQSPTLVYVNTVASLYNNMFKI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHH
MGNDRHVYDLNTFSSDEAMLPCRIGDWEDGGLWQNIFLHRWGTMNDLTKNSWDFLYEQIG
CCCCCEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
KCNQSVDKLQAFAEEQPDVEYFKVYLEEVRAVRAFFYYELLDLFARVPLVTSSTTPMSEV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHH
KQSERSVVFNFVRSELEEALPYLSDNRSNQKGEYYGRITKPVAYMILAKLALNAEVYADD
HHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCEEEECC
NWTDGNRPAGKNIKFTVDGKEMNAWEATIAYVDKLEALGYKLQGNFSENFAVANETSVEN
CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCEEECCCCCCCE
IFTVPMDPVAYPDAKDYNLVRTRHYDHATAYGQSGWNGSCATVKAMNVFKFGTADEDPRC
EEECCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCE
KLTYFTGEVTGPDGKTIYTEWDGQKVPLKYEPNAPKVYMDASDGLLVKTAGARMAKYEFD
EEEEEEEEEECCCCCEEEEECCCCCCCEEECCCCCEEEEECCCCEEEEECCCCCEEEECC
QNAQDGGNLHGNDCVIFRFADALLMKAEAKIRLGQNGDDEVNQVRNRVGAKPLQNVTLDT
CCCCCCCCCCCCCEEEEEEHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCHHCCHHHH
LLDERMLELAWEGVRRQDLIRFGKFTEATVDRYVGVKHFASSLDYQEDKTGYTTVFSIYA
HHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
DILSLNPNLTQNPGY
HHHHCCCCCCCCCCC
>Mature Secondary Structure
MKKKFIYSFMIAAAAAAFSSCSNFLEERPTDAFDEETAFQSPTLVYVNTVASLYNNMFKI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHH
MGNDRHVYDLNTFSSDEAMLPCRIGDWEDGGLWQNIFLHRWGTMNDLTKNSWDFLYEQIG
CCCCCEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
KCNQSVDKLQAFAEEQPDVEYFKVYLEEVRAVRAFFYYELLDLFARVPLVTSSTTPMSEV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHH
KQSERSVVFNFVRSELEEALPYLSDNRSNQKGEYYGRITKPVAYMILAKLALNAEVYADD
HHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCEEEECC
NWTDGNRPAGKNIKFTVDGKEMNAWEATIAYVDKLEALGYKLQGNFSENFAVANETSVEN
CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCEEECCCCCCCE
IFTVPMDPVAYPDAKDYNLVRTRHYDHATAYGQSGWNGSCATVKAMNVFKFGTADEDPRC
EEECCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCE
KLTYFTGEVTGPDGKTIYTEWDGQKVPLKYEPNAPKVYMDASDGLLVKTAGARMAKYEFD
EEEEEEEEEECCCCCEEEEECCCCCCCEEECCCCCEEEEECCCCEEEEECCCCCEEEECC
QNAQDGGNLHGNDCVIFRFADALLMKAEAKIRLGQNGDDEVNQVRNRVGAKPLQNVTLDT
CCCCCCCCCCCCCEEEEEEHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCHHCCHHHH
LLDERMLELAWEGVRRQDLIRFGKFTEATVDRYVGVKHFASSLDYQEDKTGYTTVFSIYA
HHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
DILSLNPNLTQNPGY
HHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA