| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is nodX [H]
Identifier: 150009599
GI number: 150009599
Start: 3604525
End: 3605598
Strand: Direct
Name: nodX [H]
Synonym: BDI_3012
Alternate gene names: 150009599
Gene position: 3604525-3605598 (Clockwise)
Preceding gene: 150009598
Following gene: 150009602
Centisome position: 74.92
GC content: 35.47
Gene sequence:
>1074_bases ATGAATCAATCAGAGAAAGTTTTACTCAACTCCAGATTAATAAATCAAGTAAAAGAAGCGAATAATTTTGATTTTATTCG CTTCTTTCTTGCGTATTCTGTCATGTTCAACCATTTCAGCACACTGACAGAGACAGATCCTTTTTGGTTTGTTAGCGGAG GATTTCGAGTGAAAGGTTTCTTTATTATTAGTGGATTTCTTGTTATGTTTAGCTTCTTACGTACGCCTAATACCCGGATT TTTTTCCGTAAACGTATTCAACGTATTATGCCCGCCTACAGCTTGACTATTTTATTATGTGCCTTAATCGGATTATTCCT TACTTCCTTATCCTGCAGGGAATACCTCACCTCTTCTAGCTTATACACCTATCTTATCTGTAATTTACTTACATTTAACT TTTTATCGCCGGATTTACCCGGCGTATTCGATACCAATCCTTTACAAGCGATGAATGGGTCTTTATGGACTATCAAGGTT GAATTCATGCTATATATCACCATACCCATTATCTATTGGTTACTGAAAAGATATAACAAATTAGTATGCCTACTTCTTAT TTATATCTTATCTTTCATCTACTCGACAACGTGTAATTATTTAGATGATATGACACACAACCCTATTTATGAATTCATGA AAAGACAATTCCCCGGACAAATGATGTACTTTTGTTCTGGTATTATCATACTTGCCTATTTCCCTATTTTTCGAAAATAT ATGAGATATTTGTTCCCTGTCAGCCTATTTCTTTTATTGGGTAGAGAGTATCTGTTGCTGAGTATTTTCGAGCCTATCGC TCTAGCCTCTATCATTATCACGGTAGCTTACGGATTCAAGTGGTTACATGTATTCAACCGGATGGGAAATTTCTCGTATG GTATCTTCTTGATTCATTTCCCGATCATCCAGATATTCATTCATTACGGACTTGATCAATATAGCTTTATATTGACATTG GCTCTTACCACTATCCTTAGCACCGGATTAGGTATGTTATCCTGGAAATACATAGAGAAACCTTGTTTATATCATCCTAA AAAGAAAAACCAGATGAACGCAATGCTCGGATGA
Upstream 100 bases:
>100_bases AACGGATCACGTGTAGCGACAGGCGTATATCTTGTACTAGCTTCCACGGAGGAAGCCTCAGAGAGCGTCGTAACAAAAAT CATTGTAGTCAAATAGAACA
Downstream 100 bases:
>100_bases TCGGATCTGTTATCTTCTCCGCTCCTTTCGCAGCGATTAATGCCAAGAACCAAATTCCACCATCCGTAAAAGAGGGAAAC AACTACGACTGCAGAATTTA
Product: acyltransferase
Products: NA
Alternate protein names: Nodulation protein X; Probable sugar acetylase [H]
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MNQSEKVLLNSRLINQVKEANNFDFIRFFLAYSVMFNHFSTLTETDPFWFVSGGFRVKGFFIISGFLVMFSFLRTPNTRI FFRKRIQRIMPAYSLTILLCALIGLFLTSLSCREYLTSSSLYTYLICNLLTFNFLSPDLPGVFDTNPLQAMNGSLWTIKV EFMLYITIPIIYWLLKRYNKLVCLLLIYILSFIYSTTCNYLDDMTHNPIYEFMKRQFPGQMMYFCSGIIILAYFPIFRKY MRYLFPVSLFLLLGREYLLLSIFEPIALASIIITVAYGFKWLHVFNRMGNFSYGIFLIHFPIIQIFIHYGLDQYSFILTL ALTTILSTGLGMLSWKYIEKPCLYHPKKKNQMNAMLG
Sequences:
>Translated_357_residues MNQSEKVLLNSRLINQVKEANNFDFIRFFLAYSVMFNHFSTLTETDPFWFVSGGFRVKGFFIISGFLVMFSFLRTPNTRI FFRKRIQRIMPAYSLTILLCALIGLFLTSLSCREYLTSSSLYTYLICNLLTFNFLSPDLPGVFDTNPLQAMNGSLWTIKV EFMLYITIPIIYWLLKRYNKLVCLLLIYILSFIYSTTCNYLDDMTHNPIYEFMKRQFPGQMMYFCSGIIILAYFPIFRKY MRYLFPVSLFLLLGREYLLLSIFEPIALASIIITVAYGFKWLHVFNRMGNFSYGIFLIHFPIIQIFIHYGLDQYSFILTL ALTTILSTGLGMLSWKYIEKPCLYHPKKKNQMNAMLG >Mature_357_residues MNQSEKVLLNSRLINQVKEANNFDFIRFFLAYSVMFNHFSTLTETDPFWFVSGGFRVKGFFIISGFLVMFSFLRTPNTRI FFRKRIQRIMPAYSLTILLCALIGLFLTSLSCREYLTSSSLYTYLICNLLTFNFLSPDLPGVFDTNPLQAMNGSLWTIKV EFMLYITIPIIYWLLKRYNKLVCLLLIYILSFIYSTTCNYLDDMTHNPIYEFMKRQFPGQMMYFCSGIIILAYFPIFRKY MRYLFPVSLFLLLGREYLLLSIFEPIALASIIITVAYGFKWLHVFNRMGNFSYGIFLIHFPIIQIFIHYGLDQYSFILTL ALTTILSTGLGMLSWKYIEKPCLYHPKKKNQMNAMLG
Specific function: Not known. NodX allows Rhizobium leguminosarum biovar viciae strain TOM to nodulate Afghanistan peas [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 41984; Mature: 41984
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQSEKVLLNSRLINQVKEANNFDFIRFFLAYSVMFNHFSTLTETDPFWFVSGGFRVKGF CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEHH FIISGFLVMFSFLRTPNTRIFFRKRIQRIMPAYSLTILLCALIGLFLTSLSCREYLTSSS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH LYTYLICNLLTFNFLSPDLPGVFDTNPLQAMNGSLWTIKVEFMLYITIPIIYWLLKRYNK HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHH LVCLLLIYILSFIYSTTCNYLDDMTHNPIYEFMKRQFPGQMMYFCSGIIILAYFPIFRKY HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH MRYLFPVSLFLLLGREYLLLSIFEPIALASIIITVAYGFKWLHVFNRMGNFSYGIFLIHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH PIIQIFIHYGLDQYSFILTLALTTILSTGLGMLSWKYIEKPCLYHPKKKNQMNAMLG HHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MNQSEKVLLNSRLINQVKEANNFDFIRFFLAYSVMFNHFSTLTETDPFWFVSGGFRVKGF CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEHH FIISGFLVMFSFLRTPNTRIFFRKRIQRIMPAYSLTILLCALIGLFLTSLSCREYLTSSS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH LYTYLICNLLTFNFLSPDLPGVFDTNPLQAMNGSLWTIKVEFMLYITIPIIYWLLKRYNK HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHH LVCLLLIYILSFIYSTTCNYLDDMTHNPIYEFMKRQFPGQMMYFCSGIIILAYFPIFRKY HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH MRYLFPVSLFLLLGREYLLLSIFEPIALASIIITVAYGFKWLHVFNRMGNFSYGIFLIHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH PIIQIFIHYGLDQYSFILTLALTTILSTGLGMLSWKYIEKPCLYHPKKKNQMNAMLG HHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3419422 [H]