| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009532
Identifier: 150009532
GI number: 150009532
Start: 3523976
End: 3525547
Strand: Direct
Name: 150009532
Synonym: BDI_2945
Alternate gene names: NA
Gene position: 3523976-3525547 (Clockwise)
Preceding gene: 150009531
Following gene: 150009533
Centisome position: 73.24
GC content: 45.23
Gene sequence:
>1572_bases ATGAAAAAGATAATTATAGCCATGATGGCAGCAGTCTCATTACTGAATTTCAGCGGATGCGACTCCTTGGACATGGAACC CGTAAGTAGTATTTCCGACGCAAACTATTGGAAATCCCCGGACCTGTTTAAGGCATTCAACATAGGTTTACACGGATTGC TCCGTTCACAATCCAGTTATAACATATTCGTATTGGGCGAACCTCGCTCGGACATCTACGGAGATCAGCCGTTCGGAGGC GAGGCTACCCAAGGCGTAGAGCGTTTCTCATACAATACGATCAACGCAGAGTTTACAGGAATCAGCAACTTCGCTAATTT TTATACGACACTGAACCAAATCAACTTGATGATCCGTAGAACGAACGAGACCGATTTATTAGGCGAGGCCGAAAAGAACT ATTACTTAGGGCAGGCTTACGGTTTACGCGCCTATATCTATTTCCATTTGTTACGCTCTTGGGGAGACGTTATCATTACT ACGGAGCCAACCTTAGGTAGCGAATTGGACATCTCTCACCTTGATAAGGCCGCTTCTCCAGCGAGTGAGGTGATGGATCT GATCAAGAAGGATATCGATGCCTCGGAAAAAGCTTTTGGCGGAGATTATTCTTATAAACAAGGAAAGTGTTATTGGTCTA AACCCGCTACCTTGATGCTGAAAGGTGAGGTTTATCTATGGAGCGGACGCCAGATGGGTGGCGGCACGGGCGATTATACC GTAGCCAAGACAGCCTTGCAAGATCTTCAACAAAACGGCAACTTAAAGCTGCAAGAGAAATTCACGGACGTTTTCTCTTT CAACAATAAGGAGAACAGCGAGATGATCTTCGCACTCCATAGTGGTAAGGAGGATGATTTCATGATGTGGAGAGACTATA ACTGGCGTAACAATATGGTACCTCAACGTGAGTACATGGCAGGCTACTGTGACGAGACAGGAACTCCATTCCTTGAAATA CCGGGATACAACCTACAAGGCTTAATGCGCTACCAAGTAAAGAAAGATCATTACCTAAAATCATTCCGCGAAGGTGATAC CCGCTTGAAAGGTACCTTGAAGGCCGTTTATAAAAAGCACGAAGACGGCACCTTGGAGTATATCGCACCAATCCAATACA AGTTCCAAGGAACCACCTTGGAAGGTAGTAACGAGAGAAGTTGGTACGATGATTATCCTATCTATCGCTATGCGGATGCC TTGCTATTATTAGCCGAGGCTAAGGCCTTGCTCGGAGAAGATCCTTCTACAGAGATCAACGCCGTTCGCGAGCGTGCTTA CGGTTCCGAATATTTTAACGCACATAAGAACGAGGTGGCTTATCCGAATGACAAAGGAAGTTTCTATAACGATAACCCGT TTGAGGCGGGCGACGAGAATGTGATGGAAGCTATCCTTAAAGAGAGACTTCGCGAGTTCTTCTTTGAGGGTAAACGTTGG TACGACTTGAGACGCTTCGGTAAGGATTATGTATTAAAATATACCACAGCACAAGAATCACGTTTATTATGGCCGATCAA TGAAGGGGCATTGACAAACAATCCCGCATTGAAACAGACTCCCGGATACTAA
Upstream 100 bases:
>100_bases GGTCAAGGTCTTGATAACGGTAGATACCCAACTCCTAAAACGGTTCTTCTTGGTTTATCCGTAACATTTTAGTCAAACCC ATTAAAAAAGACAGACATTT
Downstream 100 bases:
>100_bases TCGTACATAGGTTTAAGGCGATTGGATATAACTAGGTTTTTGGCACGAATTCCAAAGGGGCTTTGTTCATATGAATGAAT ATCGCTACCTTTGGAATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein; Ragb/Susd Domain Protein; Lipoprotein
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MKKIIIAMMAAVSLLNFSGCDSLDMEPVSSISDANYWKSPDLFKAFNIGLHGLLRSQSSYNIFVLGEPRSDIYGDQPFGG EATQGVERFSYNTINAEFTGISNFANFYTTLNQINLMIRRTNETDLLGEAEKNYYLGQAYGLRAYIYFHLLRSWGDVIIT TEPTLGSELDISHLDKAASPASEVMDLIKKDIDASEKAFGGDYSYKQGKCYWSKPATLMLKGEVYLWSGRQMGGGTGDYT VAKTALQDLQQNGNLKLQEKFTDVFSFNNKENSEMIFALHSGKEDDFMMWRDYNWRNNMVPQREYMAGYCDETGTPFLEI PGYNLQGLMRYQVKKDHYLKSFREGDTRLKGTLKAVYKKHEDGTLEYIAPIQYKFQGTTLEGSNERSWYDDYPIYRYADA LLLLAEAKALLGEDPSTEINAVRERAYGSEYFNAHKNEVAYPNDKGSFYNDNPFEAGDENVMEAILKERLREFFFEGKRW YDLRRFGKDYVLKYTTAQESRLLWPINEGALTNNPALKQTPGY
Sequences:
>Translated_523_residues MKKIIIAMMAAVSLLNFSGCDSLDMEPVSSISDANYWKSPDLFKAFNIGLHGLLRSQSSYNIFVLGEPRSDIYGDQPFGG EATQGVERFSYNTINAEFTGISNFANFYTTLNQINLMIRRTNETDLLGEAEKNYYLGQAYGLRAYIYFHLLRSWGDVIIT TEPTLGSELDISHLDKAASPASEVMDLIKKDIDASEKAFGGDYSYKQGKCYWSKPATLMLKGEVYLWSGRQMGGGTGDYT VAKTALQDLQQNGNLKLQEKFTDVFSFNNKENSEMIFALHSGKEDDFMMWRDYNWRNNMVPQREYMAGYCDETGTPFLEI PGYNLQGLMRYQVKKDHYLKSFREGDTRLKGTLKAVYKKHEDGTLEYIAPIQYKFQGTTLEGSNERSWYDDYPIYRYADA LLLLAEAKALLGEDPSTEINAVRERAYGSEYFNAHKNEVAYPNDKGSFYNDNPFEAGDENVMEAILKERLREFFFEGKRW YDLRRFGKDYVLKYTTAQESRLLWPINEGALTNNPALKQTPGY >Mature_523_residues MKKIIIAMMAAVSLLNFSGCDSLDMEPVSSISDANYWKSPDLFKAFNIGLHGLLRSQSSYNIFVLGEPRSDIYGDQPFGG EATQGVERFSYNTINAEFTGISNFANFYTTLNQINLMIRRTNETDLLGEAEKNYYLGQAYGLRAYIYFHLLRSWGDVIIT TEPTLGSELDISHLDKAASPASEVMDLIKKDIDASEKAFGGDYSYKQGKCYWSKPATLMLKGEVYLWSGRQMGGGTGDYT VAKTALQDLQQNGNLKLQEKFTDVFSFNNKENSEMIFALHSGKEDDFMMWRDYNWRNNMVPQREYMAGYCDETGTPFLEI PGYNLQGLMRYQVKKDHYLKSFREGDTRLKGTLKAVYKKHEDGTLEYIAPIQYKFQGTTLEGSNERSWYDDYPIYRYADA LLLLAEAKALLGEDPSTEINAVRERAYGSEYFNAHKNEVAYPNDKGSFYNDNPFEAGDENVMEAILKERLREFFFEGKRW YDLRRFGKDYVLKYTTAQESRLLWPINEGALTNNPALKQTPGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59894; Mature: 59894
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIIIAMMAAVSLLNFSGCDSLDMEPVSSISDANYWKSPDLFKAFNIGLHGLLRSQSSY CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC NIFVLGEPRSDIYGDQPFGGEATQGVERFSYNTINAEFTGISNFANFYTTLNQINLMIRR EEEEEECCCHHCCCCCCCCCHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHEEEEEEE TNETDLLGEAEKNYYLGQAYGLRAYIYFHLLRSWGDVIITTEPTLGSELDISHLDKAASP CCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCC ASEVMDLIKKDIDASEKAFGGDYSYKQGKCYWSKPATLMLKGEVYLWSGRQMGGGTGDYT HHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEECCCCEEEEECEEEEEECCCCCCCCCCHH VAKTALQDLQQNGNLKLQEKFTDVFSFNNKENSEMIFALHSGKEDDFMMWRDYNWRNNMV HHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCC PQREYMAGYCDETGTPFLEIPGYNLQGLMRYQVKKDHYLKSFREGDTRLKGTLKAVYKKH CCHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC EDGTLEYIAPIQYKFQGTTLEGSNERSWYDDYPIYRYADALLLLAEAKALLGEDPSTEIN CCCCEEEEECEEEEEECCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH AVRERAYGSEYFNAHKNEVAYPNDKGSFYNDNPFEAGDENVMEAILKERLREFFFEGKRW HHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHH YDLRRFGKDYVLKYTTAQESRLLWPINEGALTNNPALKQTPGY HHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKIIIAMMAAVSLLNFSGCDSLDMEPVSSISDANYWKSPDLFKAFNIGLHGLLRSQSSY CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC NIFVLGEPRSDIYGDQPFGGEATQGVERFSYNTINAEFTGISNFANFYTTLNQINLMIRR EEEEEECCCHHCCCCCCCCCHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHEEEEEEE TNETDLLGEAEKNYYLGQAYGLRAYIYFHLLRSWGDVIITTEPTLGSELDISHLDKAASP CCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCC ASEVMDLIKKDIDASEKAFGGDYSYKQGKCYWSKPATLMLKGEVYLWSGRQMGGGTGDYT HHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEECCCCEEEEECEEEEEECCCCCCCCCCHH VAKTALQDLQQNGNLKLQEKFTDVFSFNNKENSEMIFALHSGKEDDFMMWRDYNWRNNMV HHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCC PQREYMAGYCDETGTPFLEIPGYNLQGLMRYQVKKDHYLKSFREGDTRLKGTLKAVYKKH CCHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC EDGTLEYIAPIQYKFQGTTLEGSNERSWYDDYPIYRYADALLLLAEAKALLGEDPSTEIN CCCCEEEEECEEEEEECCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH AVRERAYGSEYFNAHKNEVAYPNDKGSFYNDNPFEAGDENVMEAILKERLREFFFEGKRW HHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHH YDLRRFGKDYVLKYTTAQESRLLWPINEGALTNNPALKQTPGY HHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA