| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009498
Identifier: 150009498
GI number: 150009498
Start: 3477372
End: 3478982
Strand: Direct
Name: 150009498
Synonym: BDI_2911
Alternate gene names: NA
Gene position: 3477372-3478982 (Clockwise)
Preceding gene: 150009497
Following gene: 150009499
Centisome position: 72.27
GC content: 53.45
Gene sequence:
>1611_bases ATGAAAAAACTTTTTACCTATGTAATCATGCTTTACGCCAGCCTATCCGTTTCCGTGGCGCAACAGATCCAGTATCCGGA GCCGGTGTTAAACCCGGAGAGTTGTACGAGTATCATGGTCGGGAAAAAAGCCTCGGCGGATGGTTCCGTGATGACCAGCC ACACCTGCGATAGCAATTACCGCACTTGGATGGATATCGTACCTTCCGCCTCGTACGATCACGATACGACAACCACGGTC TATACCGGACGTATGCATACCGAATACGCCGAGGGAACCCGGGGGATGATCGCAAAAGGAACGCTGCCCGAAGCGCGGTC TACGTATCAATTCCTCAACACCGCCTATCCCTGCCTCAACGAGAAGCAGTTGGGTATCGGCGAGACAACGATCACCGGCC GGAAAGCCCTTGTCAACAAGAAAGGTATGTTCATGATCGAGGAACTTCAGCGAATCGCCTTGCAACGTTGCACGACCGCC CGTGACGCGATCCGCTTAATGGGCGAGTTGATCGAGAAATACGGATATGGCGACTGGGGCGAGTGCCTTACGATAGCGGA TCCGAAAGAGGTATGGCATTTCGAGGTCTTCGGCGAGGGTCCGGATAAGATCGGTGGCGTATGGGCGGCGATCCGCATCC CCGACGATCATGTGGGCGTATCGGCCAATATCCCCCGTATCTCCAAGGTAGATCCGAGCGACAAGGAGAATTGCATGGCT TCCGCCAACGTATTCGAGGTAGCCAAGCGCATGGGCTTCTGGGACGGGAAGAAACCGTTCCGCTTCTGGGAGGCCTATGG CGGCGGGAACTATTCGGGAGAATTGAAATCCTTCAGCATCCGCGAGTTTTTCATTTTGAATAAGCTGGCGCCATCCTTGC ATCTTTCTTATGATGCCGAGGAACTTCCGATCAGCGTAAAACCGGAAAAACCGGTTGACGTGACCGACGTGATGGCCCTT CTCTCCGAGACGTATGAGGGGACGGAATATGATATGACGAAGAACCTGAAAGTCGCCGTCAAGAAAAAAGATAGTAACGA GACAGATACCATTATCAGCCCGGTAGCGAATCCGTGGATGACTACGGATATGGTAAACATGTTAAACGGACTCAGACCGG ATGCCGTGAAACGCTACCGCCTTGTAGCCGTGCCGCAATGCTCCTACTCTACCGTGATCCAATTGCGTGACTGGCTGCCC GACGCGGTAGGCGGCGTGGTTTGGATGGCCTATGATAATCCCGGACAAAGCCCCCGCATCCCCATCTTCTGTGGGACGAA AGATCTCCCGGCTTGCTTCAAGGTTTGCGGACAGCACCGTTACCGGGAAGATGCCGCCGTATGGGCTTTCCGTCGTGCCA ACAAACTCGCCACCGTACGTTGGGGAGCGACTAAAGATCGTATGAAAGCATCTATCGCCCATTTTACGGAGAAAGGGCAG ACAGAACTTCCTTTCGTAGAGAGCCGTTACAAAGAGATTCTTACCCAACAAGGTGAGGAGGCCGCAAAAGAATACCTAAC CGGATATACCGCCGATTTCGCCGGAGCCACGATGCTACGCTGGAGAGAAATGGGAGACTCATTCTGGACCCAATTCGAAA GAGGCTTCTAA
Upstream 100 bases:
>100_bases TATAGTCGTATCGTATTCAAGAATTAACAAATAAATCGTATATTTACGGTCATAAAAATCTTCTCGGACAATTGATACAA ACATTTAAAATACAAGAAAG
Downstream 100 bases:
>100_bases TCACCACATCCGATAGTAAAGACGAGGCACGCCCCGTCTCTACAATAATAATATAAACTTAAATTCATATACAATGAGAA CATTCATTCTATCATGCGCC
Product: putative secreted peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 536; Mature: 536
Protein sequence:
>536_residues MKKLFTYVIMLYASLSVSVAQQIQYPEPVLNPESCTSIMVGKKASADGSVMTSHTCDSNYRTWMDIVPSASYDHDTTTTV YTGRMHTEYAEGTRGMIAKGTLPEARSTYQFLNTAYPCLNEKQLGIGETTITGRKALVNKKGMFMIEELQRIALQRCTTA RDAIRLMGELIEKYGYGDWGECLTIADPKEVWHFEVFGEGPDKIGGVWAAIRIPDDHVGVSANIPRISKVDPSDKENCMA SANVFEVAKRMGFWDGKKPFRFWEAYGGGNYSGELKSFSIREFFILNKLAPSLHLSYDAEELPISVKPEKPVDVTDVMAL LSETYEGTEYDMTKNLKVAVKKKDSNETDTIISPVANPWMTTDMVNMLNGLRPDAVKRYRLVAVPQCSYSTVIQLRDWLP DAVGGVVWMAYDNPGQSPRIPIFCGTKDLPACFKVCGQHRYREDAAVWAFRRANKLATVRWGATKDRMKASIAHFTEKGQ TELPFVESRYKEILTQQGEEAAKEYLTGYTADFAGATMLRWREMGDSFWTQFERGF
Sequences:
>Translated_536_residues MKKLFTYVIMLYASLSVSVAQQIQYPEPVLNPESCTSIMVGKKASADGSVMTSHTCDSNYRTWMDIVPSASYDHDTTTTV YTGRMHTEYAEGTRGMIAKGTLPEARSTYQFLNTAYPCLNEKQLGIGETTITGRKALVNKKGMFMIEELQRIALQRCTTA RDAIRLMGELIEKYGYGDWGECLTIADPKEVWHFEVFGEGPDKIGGVWAAIRIPDDHVGVSANIPRISKVDPSDKENCMA SANVFEVAKRMGFWDGKKPFRFWEAYGGGNYSGELKSFSIREFFILNKLAPSLHLSYDAEELPISVKPEKPVDVTDVMAL LSETYEGTEYDMTKNLKVAVKKKDSNETDTIISPVANPWMTTDMVNMLNGLRPDAVKRYRLVAVPQCSYSTVIQLRDWLP DAVGGVVWMAYDNPGQSPRIPIFCGTKDLPACFKVCGQHRYREDAAVWAFRRANKLATVRWGATKDRMKASIAHFTEKGQ TELPFVESRYKEILTQQGEEAAKEYLTGYTADFAGATMLRWREMGDSFWTQFERGF >Mature_536_residues MKKLFTYVIMLYASLSVSVAQQIQYPEPVLNPESCTSIMVGKKASADGSVMTSHTCDSNYRTWMDIVPSASYDHDTTTTV YTGRMHTEYAEGTRGMIAKGTLPEARSTYQFLNTAYPCLNEKQLGIGETTITGRKALVNKKGMFMIEELQRIALQRCTTA RDAIRLMGELIEKYGYGDWGECLTIADPKEVWHFEVFGEGPDKIGGVWAAIRIPDDHVGVSANIPRISKVDPSDKENCMA SANVFEVAKRMGFWDGKKPFRFWEAYGGGNYSGELKSFSIREFFILNKLAPSLHLSYDAEELPISVKPEKPVDVTDVMAL LSETYEGTEYDMTKNLKVAVKKKDSNETDTIISPVANPWMTTDMVNMLNGLRPDAVKRYRLVAVPQCSYSTVIQLRDWLP DAVGGVVWMAYDNPGQSPRIPIFCGTKDLPACFKVCGQHRYREDAAVWAFRRANKLATVRWGATKDRMKASIAHFTEKGQ TELPFVESRYKEILTQQGEEAAKEYLTGYTADFAGATMLRWREMGDSFWTQFERGF
Specific function: Unknown
COG id: COG4690
COG function: function code E; Dipeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C69 family [H]
Homologues:
Organism=Homo sapiens, GI38504671, Length=250, Percent_Identity=25.2, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005322 [H]
Pfam domain/function: PF03577 Peptidase_C69 [H]
EC number: NA
Molecular weight: Translated: 60366; Mature: 60366
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLFTYVIMLYASLSVSVAQQIQYPEPVLNPESCTSIMVGKKASADGSVMTSHTCDSNY CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEECCCCCCCCCEEEECCCCCCC RTWMDIVPSASYDHDTTTTVYTGRMHTEYAEGTRGMIAKGTLPEARSTYQFLNTAYPCLN CCHHHHCCCCCCCCCCCEEEEECCEECHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCCC EKQLGIGETTITGRKALVNKKGMFMIEELQRIALQRCTTARDAIRLMGELIEKYGYGDWG CCCCCCCCCEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ECLTIADPKEVWHFEVFGEGPDKIGGVWAAIRIPDDHVGVSANIPRISKVDPSDKENCMA CEEEECCHHHEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH SANVFEVAKRMGFWDGKKPFRFWEAYGGGNYSGELKSFSIREFFILNKLAPSLHLSYDAE HHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCEEHHHHHHHHHCCCCEEEECCHH ELPISVKPEKPVDVTDVMALLSETYEGTEYDMTKNLKVAVKKKDSNETDTIISPVANPWM HCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCH TTDMVNMLNGLRPDAVKRYRLVAVPQCSYSTVIQLRDWLPDAVGGVVWMAYDNPGQSPRI HHHHHHHHHCCCCCHHHHEEEEEECCCCHHHHHHHHHHCCHHHCCEEEEEECCCCCCCCE PIFCGTKDLPACFKVCGQHRYREDAAVWAFRRANKLATVRWGATKDRMKASIAHFTEKGQ EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCC TELPFVESRYKEILTQQGEEAAKEYLTGYTADFAGATMLRWREMGDSFWTQFERGF CCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKLFTYVIMLYASLSVSVAQQIQYPEPVLNPESCTSIMVGKKASADGSVMTSHTCDSNY CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEECCCCCCCCCEEEECCCCCCC RTWMDIVPSASYDHDTTTTVYTGRMHTEYAEGTRGMIAKGTLPEARSTYQFLNTAYPCLN CCHHHHCCCCCCCCCCCEEEEECCEECHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCCC EKQLGIGETTITGRKALVNKKGMFMIEELQRIALQRCTTARDAIRLMGELIEKYGYGDWG CCCCCCCCCEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH ECLTIADPKEVWHFEVFGEGPDKIGGVWAAIRIPDDHVGVSANIPRISKVDPSDKENCMA CEEEECCHHHEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH SANVFEVAKRMGFWDGKKPFRFWEAYGGGNYSGELKSFSIREFFILNKLAPSLHLSYDAE HHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCEEHHHHHHHHHCCCCEEEECCHH ELPISVKPEKPVDVTDVMALLSETYEGTEYDMTKNLKVAVKKKDSNETDTIISPVANPWM HCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCH TTDMVNMLNGLRPDAVKRYRLVAVPQCSYSTVIQLRDWLPDAVGGVVWMAYDNPGQSPRI HHHHHHHHHCCCCCHHHHEEEEEECCCCHHHHHHHHHHCCHHHCCEEEEEECCCCCCCCE PIFCGTKDLPACFKVCGQHRYREDAAVWAFRRANKLATVRWGATKDRMKASIAHFTEKGQ EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCC TELPFVESRYKEILTQQGEEAAKEYLTGYTADFAGATMLRWREMGDSFWTQFERGF CCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA