Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150009491

Identifier: 150009491

GI number: 150009491

Start: 3466442

End: 3467380

Strand: Reverse

Name: 150009491

Synonym: BDI_2904

Alternate gene names: NA

Gene position: 3467380-3466442 (Counterclockwise)

Preceding gene: 150009492

Following gene: 150009490

Centisome position: 72.07

GC content: 36.63

Gene sequence:

>939_bases
TTGTATTATGAAAAAACTTTTTTAATTATTAGTGTTTTATTGGGTATATTGTTTTATCCTGTAAATGCTCAACAGCGAAT
AGTGGAGGGATCTAATATCAATATATCAGAGGTTCCTTGGCAGGTTGCGATTCAAACGAAAGGTGTTTTTAACGGAGGAG
GGTCTATATTGGCTCCAAACTTGATTTTAACAGCTGCTCATGTGGTGGAAAAATATACTGCAAAAGAGGTTAAAGTGGGA
GTTGGTAGTTCTAAATATTCAAATATTGGTGCGAATTGGTATTCTGTTTCAAATATTGTTTATCACCCTTCTTTGGATAT
TGCTTTATTAATATTGTCTAGGCCTTTGTCTTATTCTACAAATGTAAAAGCTATAGATATTCTTTCAGCTAATAAGGCTT
CTTATTATAATGTAGGAAATATACTTCGAGTTACAGGTTGGGGGATTACTTTTCTTGTGATTGATGATCCTTTTAAAGAA
TGGAAAATGTCAGATGATTTAAAAAAGGTAGATCTTCCTATTGTTTCAAATTCTACTATAGGAGCTGCTAATAGTTTTGT
TATTACATATGATGGTAAGCATAGTCCTTCTAAAGGTGATAGTGGTGGAGCATTGACAATTTGGGATTCTTCTTTACAGA
GACATGTTGTAATTGGAACTGTACATGGAAATCCTAGTACTCAGAGAGCTTATTGTGCGTATGTTCGATCTTCCTCCTTC
CTCGACTTCCTCCTTCCTTACTATCCCATATCCATCACCGGTGGTTCAGACCAAGTCTGTTCTTCTTCAACATTCTCTGT
AAGTTATCCAAACTCCACAGTTACTTGGTCATGCACGGGGCCTTTGCGAATAACCTCGCAAAGCAATACTTCTTGTACGG
TCTCTTCTACCGGTAACGGACCTGCCGTATTGAAAGCCACAATCAAGAGCGGAAAGTAA

Upstream 100 bases:

>100_bases
GGGATAGAAAGAGATATCCATTGTGTAAATCGGATTCCTCAGTAATTGATATTTCTGTACTTTCTGTTCGAGAATTGAAT
GAATAAACTTTTTAATATGA

Downstream 100 bases:

>100_bases
TTAGTGGAGGCTATACCTCTTGTATGATCACCTATCGGAACACTGTGAATGGAAACGATACATGGTGTACGAGCCATTCC
GGAAATATCTTCACCATCGA

Product: putative serine protease

Products: NA

Alternate protein names: Trypsin-Like Serine Protease; Peptidase S1a Subfamily; Hypodermin-A

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MYYEKTFLIISVLLGILFYPVNAQQRIVEGSNINISEVPWQVAIQTKGVFNGGGSILAPNLILTAAHVVEKYTAKEVKVG
VGSSKYSNIGANWYSVSNIVYHPSLDIALLILSRPLSYSTNVKAIDILSANKASYYNVGNILRVTGWGITFLVIDDPFKE
WKMSDDLKKVDLPIVSNSTIGAANSFVITYDGKHSPSKGDSGGALTIWDSSLQRHVVIGTVHGNPSTQRAYCAYVRSSSF
LDFLLPYYPISITGGSDQVCSSSTFSVSYPNSTVTWSCTGPLRITSQSNTSCTVSSTGNGPAVLKATIKSGK

Sequences:

>Translated_312_residues
MYYEKTFLIISVLLGILFYPVNAQQRIVEGSNINISEVPWQVAIQTKGVFNGGGSILAPNLILTAAHVVEKYTAKEVKVG
VGSSKYSNIGANWYSVSNIVYHPSLDIALLILSRPLSYSTNVKAIDILSANKASYYNVGNILRVTGWGITFLVIDDPFKE
WKMSDDLKKVDLPIVSNSTIGAANSFVITYDGKHSPSKGDSGGALTIWDSSLQRHVVIGTVHGNPSTQRAYCAYVRSSSF
LDFLLPYYPISITGGSDQVCSSSTFSVSYPNSTVTWSCTGPLRITSQSNTSCTVSSTGNGPAVLKATIKSGK
>Mature_312_residues
MYYEKTFLIISVLLGILFYPVNAQQRIVEGSNINISEVPWQVAIQTKGVFNGGGSILAPNLILTAAHVVEKYTAKEVKVG
VGSSKYSNIGANWYSVSNIVYHPSLDIALLILSRPLSYSTNVKAIDILSANKASYYNVGNILRVTGWGITFLVIDDPFKE
WKMSDDLKKVDLPIVSNSTIGAANSFVITYDGKHSPSKGDSGGALTIWDSSLQRHVVIGTVHGNPSTQRAYCAYVRSSSF
LDFLLPYYPISITGGSDQVCSSSTFSVSYPNSTVTWSCTGPLRITSQSNTSCTVSSTGNGPAVLKATIKSGK

Specific function: Unknown

COG id: COG5640

COG function: function code O; Secreted trypsin-like serine protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4506153, Length=213, Percent_Identity=30.9859154929577, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI66347875, Length=254, Percent_Identity=24.8031496062992, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI13173471, Length=241, Percent_Identity=28.2157676348548, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI78191798, Length=244, Percent_Identity=27.4590163934426, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI291167777, Length=241, Percent_Identity=29.8755186721992, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI291167775, Length=241, Percent_Identity=29.8755186721992, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI145701030, Length=241, Percent_Identity=29.8755186721992, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI15451940, Length=241, Percent_Identity=29.8755186721992, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI18859959, Length=246, Percent_Identity=28.0487804878049, Blast_Score=85, Evalue=7e-17,
Organism=Drosophila melanogaster, GI20129689, Length=199, Percent_Identity=31.1557788944724, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24581459, Length=197, Percent_Identity=31.4720812182741, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24652712, Length=194, Percent_Identity=30.4123711340206, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24652714, Length=194, Percent_Identity=30.4123711340206, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24652710, Length=194, Percent_Identity=30.4123711340206, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24652708, Length=194, Percent_Identity=30.4123711340206, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24581087, Length=218, Percent_Identity=31.651376146789, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI17986089, Length=164, Percent_Identity=31.7073170731707, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI78707268, Length=198, Percent_Identity=30.3030303030303, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI78707270, Length=198, Percent_Identity=30.3030303030303, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI17933738, Length=198, Percent_Identity=29.7979797979798, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI19920566, Length=148, Percent_Identity=32.4324324324324, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281362515, Length=139, Percent_Identity=33.8129496402878, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24647630, Length=204, Percent_Identity=31.8627450980392, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24584310, Length=113, Percent_Identity=36.283185840708, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI221330452, Length=204, Percent_Identity=29.9019607843137, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221474989, Length=222, Percent_Identity=27.9279279279279, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24653378, Length=224, Percent_Identity=29.0178571428571, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21358525, Length=211, Percent_Identity=27.4881516587678, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24581077, Length=200, Percent_Identity=26.5, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24658930, Length=137, Percent_Identity=31.3868613138686, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24653960, Length=203, Percent_Identity=26.6009852216749, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI17136562, Length=194, Percent_Identity=31.4432989690722, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI19922026, Length=238, Percent_Identity=27.7310924369748, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33619; Mature: 33619

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS00135 TRYPSIN_SER ; PS50240 TRYPSIN_DOM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYEKTFLIISVLLGILFYPVNAQQRIVEGSNINISEVPWQVAIQTKGVFNGGGSILAPN
CCCCHHHHHHHHHHHHHEECCCCHHEEECCCCCEEECCCEEEEEEECEEECCCCCEECCH
LILTAAHVVEKYTAKEVKVGVGSSKYSNIGANWYSVSNIVYHPSLDIALLILSRPLSYST
HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECEEEECCCCCEEEEEEECCCCCCC
NVKAIDILSANKASYYNVGNILRVTGWGITFLVIDDPFKEWKMSDDLKKVDLPIVSNSTI
CCEEEEEEECCCCCEEECCCEEEEECCCEEEEEECCCHHHCCCCCCCHHCCCEEECCCCC
GAANSFVITYDGKHSPSKGDSGGALTIWDSSLQRHVVIGTVHGNPSTQRAYCAYVRSSSF
CCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCEEEEEECCCCC
LDFLLPYYPISITGGSDQVCSSSTFSVSYPNSTVTWSCTGPLRITSQSNTSCTVSSTGNG
HHHHHCCEEEEEECCCCCCCCCCEEEEECCCCEEEEEECCCEEEEECCCCEEEEEECCCC
PAVLKATIKSGK
CEEEEEEECCCC
>Mature Secondary Structure
MYYEKTFLIISVLLGILFYPVNAQQRIVEGSNINISEVPWQVAIQTKGVFNGGGSILAPN
CCCCHHHHHHHHHHHHHEECCCCHHEEECCCCCEEECCCEEEEEEECEEECCCCCEECCH
LILTAAHVVEKYTAKEVKVGVGSSKYSNIGANWYSVSNIVYHPSLDIALLILSRPLSYST
HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECEEEECCCCCEEEEEEECCCCCCC
NVKAIDILSANKASYYNVGNILRVTGWGITFLVIDDPFKEWKMSDDLKKVDLPIVSNSTI
CCEEEEEEECCCCCEEECCCEEEEECCCEEEEEECCCHHHCCCCCCCHHCCCEEECCCCC
GAANSFVITYDGKHSPSKGDSGGALTIWDSSLQRHVVIGTVHGNPSTQRAYCAYVRSSSF
CCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCEEEEEECCCCC
LDFLLPYYPISITGGSDQVCSSSTFSVSYPNSTVTWSCTGPLRITSQSNTSCTVSSTGNG
HHHHHCCEEEEEECCCCCCCCCCEEEEECCCCEEEEEECCCEEEEECCCCEEEEEECCCC
PAVLKATIKSGK
CEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA