| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009486
Identifier: 150009486
GI number: 150009486
Start: 3461356
End: 3463002
Strand: Direct
Name: 150009486
Synonym: BDI_2899
Alternate gene names: NA
Gene position: 3461356-3463002 (Clockwise)
Preceding gene: 150009485
Following gene: 150009487
Centisome position: 71.94
GC content: 49.91
Gene sequence:
>1647_bases ATGAGAAACATGAAAATAATAACCTGTTTACTAACAATCACTTCCTTGGTTTTTACCGCTTGTGGAGGAGGAAGTAATGA TATAGAGAAAGCGAAAAGCGTAGCGACCACGGAACATTTAAAGCGATACACCGAGGCCATCTCGCATGACTCCTGCCAAG GCCGTAAACCATTCTCGGAAGGGGCCGACCGTGCGGTGAACTATATCGCTCACCAAATGAAAGAGGTTGGGCTGAAACCC ATCAACGGCGATTCTTATTTCCAACAGGTTAATATCATATCCTCACGCACACGATGCCCGGACCCGATGGTCCTAAAGAC CCCGAAAGGGAAAATCCCCTTAGATTGGTTGGAAGGTTACACCGCTTTCTCCGCACGGATCGAGCCGGAGATCGATATAG ACAACGCGGAACTGGTATTCGCCGGCTATGGGATCGTAGCCCCCGAGTATGGGAAAAATGATTTCGAGGGAATCGAGAAC CCGCAGGATAAAGTAGCGGTCGTTATCGTAAATGACCCGGGACTCGGAAGCGACAACACGGATTATTTTAACGGTGATAT CATGACCTATTACGGTCGTTGGATGTATAAATTCGAGGAGGGCGCCCGACAGGGATTAAAAGGAGTTTTGATCATCCATG AAGACCGGGGAGCGGGCTATCCTTGGTCGGTCGTACGAGCTTCCGCCCAATCTAAGATGTATGTGGACAGCGATAGCGAT GCCTATCATTGCCCGCTAAACGGCTGGATCCAATTCAATGCCGCCAAGCAATTGCTGGCCGATAATGGCTACGACATTGA CCAACTAATCGAGCAATCTAAATCGCCAGACTTCAAGCCCATCTCCTTGAAATCTACGGTAACCGTCTCGATGAGGAACA CCTTCGACCGCCAGCAAAGCCCCAACGTAATCGGTTATATTCCCGGTAGCGGGAACACGGATGAGAGTGTTATTTATCTA GGCCATTGGGACCATCTAGGCTATGGAGCACCGATCAACGGCGACAGTATCATCAACGGCGCTACCGATAACGCCGTAGC CATCGCATGGATGCTCGAGATGGCACGTTGTTTCAATGTCTTGAAAGAGAAACCCCGCCGGAATATCGTCTTCCTCTCCC CTACTTGCGAGGAGACCGGATTCCTCGGTACGAAATACTATGTGGAGCACCCGTTGTTCCCGATTGATAAGATAGCCGCC GTAATCAATCTGGATGTCTTCCCGCTATGGGGCGAGAACAACGATGTCACGATCACCGGATACGGCAACTCCGAGCTGGA TGATACCCTAGCCGAGCTAGCGAAGAAATACAACCGTTACATCATGCCCGACCCCGACGCTTATAACGGGATGTTCTATC GCTCCGACCATTTCCCTTTCGTACAAAAAGGCATCCCGGCCATGTTCGCCAAAGGTTGGAACGACAACCGCAAACAGGGT AAGGAGTGGGCCAAAGAGCATATCGCACATTATTGGGCGGAAACTTACCACAAACCGACCGACCAGACCCATCCCGACAC GGATGATTACAGTGGTCTGTTACAAGAAGTACAATTATTCTTCGACCTCGGTTATAAACTGGCACAAGATACCGGATACC CGAAATGGAAGCCGAAGTCCGAATTCGCAAACGTCTTAAAAAGATAA
Upstream 100 bases:
>100_bases TATACGGCCGACGAACGGGAAGTAGTCAAAGTGGGGGTCGCTTTCGACGCAGCCACTCGCAACTTAGGTGAATGGCTGAT TGAAAAAACATTGTAATTCT
Downstream 100 bases:
>100_bases ATTGTCTGAAATAGATGATGCCAATATCAGTAAATATAAATACTTTCGCGATCGTTATTCAGGCAGGAATGCCGTAAAAC AATCAATCAACAATATGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Aminopeptidase; Peptidase; M28 Family Peptidase; Peptidase Family M; Glutamate Carboxypeptidase II; M28 Family Aminopeptidase; M23B Family Peptidase; Aminopeptidase Family; M20/M25/M40 Family Peptidase; WD40-Like Beta Propeller; PDZ Domain-Containing Protein
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MRNMKIITCLLTITSLVFTACGGGSNDIEKAKSVATTEHLKRYTEAISHDSCQGRKPFSEGADRAVNYIAHQMKEVGLKP INGDSYFQQVNIISSRTRCPDPMVLKTPKGKIPLDWLEGYTAFSARIEPEIDIDNAELVFAGYGIVAPEYGKNDFEGIEN PQDKVAVVIVNDPGLGSDNTDYFNGDIMTYYGRWMYKFEEGARQGLKGVLIIHEDRGAGYPWSVVRASAQSKMYVDSDSD AYHCPLNGWIQFNAAKQLLADNGYDIDQLIEQSKSPDFKPISLKSTVTVSMRNTFDRQQSPNVIGYIPGSGNTDESVIYL GHWDHLGYGAPINGDSIINGATDNAVAIAWMLEMARCFNVLKEKPRRNIVFLSPTCEETGFLGTKYYVEHPLFPIDKIAA VINLDVFPLWGENNDVTITGYGNSELDDTLAELAKKYNRYIMPDPDAYNGMFYRSDHFPFVQKGIPAMFAKGWNDNRKQG KEWAKEHIAHYWAETYHKPTDQTHPDTDDYSGLLQEVQLFFDLGYKLAQDTGYPKWKPKSEFANVLKR
Sequences:
>Translated_548_residues MRNMKIITCLLTITSLVFTACGGGSNDIEKAKSVATTEHLKRYTEAISHDSCQGRKPFSEGADRAVNYIAHQMKEVGLKP INGDSYFQQVNIISSRTRCPDPMVLKTPKGKIPLDWLEGYTAFSARIEPEIDIDNAELVFAGYGIVAPEYGKNDFEGIEN PQDKVAVVIVNDPGLGSDNTDYFNGDIMTYYGRWMYKFEEGARQGLKGVLIIHEDRGAGYPWSVVRASAQSKMYVDSDSD AYHCPLNGWIQFNAAKQLLADNGYDIDQLIEQSKSPDFKPISLKSTVTVSMRNTFDRQQSPNVIGYIPGSGNTDESVIYL GHWDHLGYGAPINGDSIINGATDNAVAIAWMLEMARCFNVLKEKPRRNIVFLSPTCEETGFLGTKYYVEHPLFPIDKIAA VINLDVFPLWGENNDVTITGYGNSELDDTLAELAKKYNRYIMPDPDAYNGMFYRSDHFPFVQKGIPAMFAKGWNDNRKQG KEWAKEHIAHYWAETYHKPTDQTHPDTDDYSGLLQEVQLFFDLGYKLAQDTGYPKWKPKSEFANVLKR >Mature_548_residues MRNMKIITCLLTITSLVFTACGGGSNDIEKAKSVATTEHLKRYTEAISHDSCQGRKPFSEGADRAVNYIAHQMKEVGLKP INGDSYFQQVNIISSRTRCPDPMVLKTPKGKIPLDWLEGYTAFSARIEPEIDIDNAELVFAGYGIVAPEYGKNDFEGIEN PQDKVAVVIVNDPGLGSDNTDYFNGDIMTYYGRWMYKFEEGARQGLKGVLIIHEDRGAGYPWSVVRASAQSKMYVDSDSD AYHCPLNGWIQFNAAKQLLADNGYDIDQLIEQSKSPDFKPISLKSTVTVSMRNTFDRQQSPNVIGYIPGSGNTDESVIYL GHWDHLGYGAPINGDSIINGATDNAVAIAWMLEMARCFNVLKEKPRRNIVFLSPTCEETGFLGTKYYVEHPLFPIDKIAA VINLDVFPLWGENNDVTITGYGNSELDDTLAELAKKYNRYIMPDPDAYNGMFYRSDHFPFVQKGIPAMFAKGWNDNRKQG KEWAKEHIAHYWAETYHKPTDQTHPDTDDYSGLLQEVQLFFDLGYKLAQDTGYPKWKPKSEFANVLKR
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61685; Mature: 61685
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNMKIITCLLTITSLVFTACGGGSNDIEKAKSVATTEHLKRYTEAISHDSCQGRKPFSE CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH GADRAVNYIAHQMKEVGLKPINGDSYFQQVNIISSRTRCPDPMVLKTPKGKIPLDWLEGY HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHCCC TAFSARIEPEIDIDNAELVFAGYGIVAPEYGKNDFEGIENPQDKVAVVIVNDPGLGSDNT EEEEEECCCCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC DYFNGDIMTYYGRWMYKFEEGARQGLKGVLIIHEDRGAGYPWSVVRASAQSKMYVDSDSD CEECCCEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCCCCEEEEECCCC AYHCPLNGWIQFNAAKQLLADNGYDIDQLIEQSKSPDFKPISLKSTVTVSMRNTFDRQQS EEECCCCCEEEECHHHHHHCCCCCCHHHHHHHCCCCCCCEEEECCEEEEEEHHHHHHCCC PNVIGYIPGSGNTDESVIYLGHWDHLGYGAPINGDSIINGATDNAVAIAWMLEMARCFNV CCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHH LKEKPRRNIVFLSPTCEETGFLGTKYYVEHPLFPIDKIAAVINLDVFPLWGENNDVTITG HHCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCEEEEEECCCCCEEEEE YGNSELDDTLAELAKKYNRYIMPDPDAYNGMFYRSDHFPFVQKGIPAMFAKGWNDNRKQG CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHCCHHHHHCCCCCCHHHH KEWAKEHIAHYWAETYHKPTDQTHPDTDDYSGLLQEVQLFFDLGYKLAQDTGYPKWKPKS HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCHH EFANVLKR HHHHHHCC >Mature Secondary Structure MRNMKIITCLLTITSLVFTACGGGSNDIEKAKSVATTEHLKRYTEAISHDSCQGRKPFSE CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH GADRAVNYIAHQMKEVGLKPINGDSYFQQVNIISSRTRCPDPMVLKTPKGKIPLDWLEGY HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHCCC TAFSARIEPEIDIDNAELVFAGYGIVAPEYGKNDFEGIENPQDKVAVVIVNDPGLGSDNT EEEEEECCCCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC DYFNGDIMTYYGRWMYKFEEGARQGLKGVLIIHEDRGAGYPWSVVRASAQSKMYVDSDSD CEECCCEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCCCCEEEEECCCC AYHCPLNGWIQFNAAKQLLADNGYDIDQLIEQSKSPDFKPISLKSTVTVSMRNTFDRQQS EEECCCCCEEEECHHHHHHCCCCCCHHHHHHHCCCCCCCEEEECCEEEEEEHHHHHHCCC PNVIGYIPGSGNTDESVIYLGHWDHLGYGAPINGDSIINGATDNAVAIAWMLEMARCFNV CCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHH LKEKPRRNIVFLSPTCEETGFLGTKYYVEHPLFPIDKIAAVINLDVFPLWGENNDVTITG HHCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCEEEEEECCCCCEEEEE YGNSELDDTLAELAKKYNRYIMPDPDAYNGMFYRSDHFPFVQKGIPAMFAKGWNDNRKQG CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHCCHHHHHCCCCCCHHHH KEWAKEHIAHYWAETYHKPTDQTHPDTDDYSGLLQEVQLFFDLGYKLAQDTGYPKWKPKS HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCHH EFANVLKR HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA