| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is yjhC [C]
Identifier: 150009462
GI number: 150009462
Start: 3425801
End: 3427357
Strand: Direct
Name: yjhC [C]
Synonym: BDI_2875
Alternate gene names: 150009462
Gene position: 3425801-3427357 (Clockwise)
Preceding gene: 150009461
Following gene: 150009463
Centisome position: 71.2
GC content: 50.67
Gene sequence:
>1557_bases ATGAACAAATTTATGAAAGAGGTAAATAAACAATCCTGTCCGACTGGAATCTCGAGAAGGGAATTCCTTGGGATGGCAGC CACAGGTGCTGCCGCCCTTACGATCCTGCCCAGTTTTACCGTAGCGGGATTAGGACACGTAGCTCCCAGCGATAAGCTTT ATATCGCGAAAATAGGCTGTGGCGGTATGGGAGCCGCCGATTTGGGTAGCTTGATGAATACGCCGCACAAAAACGCAGCG ATCACCTGTCTGTGCGACGTAGACGACCGTCAGTCTGCCGACGCTCGTAAGAAATACCCGAAGGCGAAGTATTTCAACGA CTTCCGTGAGATGTACGACAAGGAAGGCAAGAACTTCGATGCCGTATGTATCTCCACCCCGGATCATAACCATGCGATCC AAGCTTTCGGCGCTATGCGGATGGGTAAGCACGTATATCTGCAAAAACCGATCGCGCACGATATTTACGAGGCACGTATC CTTACCGAGGCCGCCAAGAAATACAAGGTCGTGACCCAAATGGGCGACCAAGGTAACTCTTGCGACGGTATGCGTACCCT TCGTGAATGGTTCGAGGCAGATCTGTTAGGTGACATCCAGAAGGTATATTGCTGGACCAACCGTCCTGTATGGCCGCAAG GTATTCCTTGGCCGAGCCAGAAGCCTGAGGTTCCCAAGGGATTAAATTGGGACTTATGGGTAGGTACCGCCGAGTATGTG GATTATATCGATAATCTTGTTCCGTTCAACTGGCGTGGTTGGTGGCGTTTCGGTACAGGCGCTCTTGGAGATATGGGTTG CCACATCATCGGCCCTCCATTCAAATTGCTTCAATTAGGTTATCCGACTGAGGTTTCTTGCAGCACGACCAATGTCTACT CCGGTATCTTCGAGGAGGCTTATTATCCTGAGAGTTGCCCGGTAGCCAGCTCGATCCGTTATAAATTCAAGAAGAAAGAC GGAAGCGACCTGAATCTCTATTGGATGGACGGTGGTATCATGCCGGAGCGTTTCGAGGAGATCGATCCGGATGCAGACAT GACCTGCACGATGGGAGACTTGGATATGATGGACGTAGAAGGCGCAACCGTATTCGTAGGTACGAAAGGTATGGCTTCTT GCGGCTGGGGCGGTTCCGACCCGAGATTCTGGCCAAAGGGACAGAAGGCGAACAAGAAACCGCTGTTCGACAAGGACGTG AACATTCCTCATAAATACAAACGTATCGAAGGCGGCACGAACGGTCATTACTGGGCGTGGATCGACTCTTGTATCGCAGG ATACGACAAGGCGGACGTAGAATCACCATTCGAAGGTTACGCCGGTCCGTTGACGGAGACCGTATTGATGGGTAACCTGA TCTTACGCAGCTATAATATCCGGGAACAAGTGAAACATAACGACTCGATCTACGGAGAACGCGAGGGCTTTATCTATCCG GGAAGAAACAAAACTTTCCAGTGGGACGGAGCGAACATGCGTATCACCAACTTCGAGCAAGCGAACCAATTCATCAAGCG GAAATACCGCGATGGATGGGAAGATCTCAAGTTATAA
Upstream 100 bases:
>100_bases TAATAATTTGGTTCAGAACCCGGGATATCCGGCATTCTAATCATATCAGTCTGTTTTTAATATCAATTCTTTAGACCCCA ATTCAATTATTAATCATAAT
Downstream 100 bases:
>100_bases AAGCGAACAACAATGGGATGAGACGGGGCACACCCCGTCTCTACAACTAGATAATTTACTTAAATAACTATACAAAGATG AAAAAGATTTATAGCAGTAT
Product: putative dehydrogenase
Products: NA
Alternate protein names: Oxidoreductase Domain-Containing Protein; NADH-Dependent Dehydrogenase; Oxidoreductase; Dehydrogenase; NADH-Dependent Dyhydrogenase; Dehydrogenase-Like Protein; NADH-Dependent Dehydrogenase-Like Protein; NADH-Dependent Dihydrogenase; NADH-Dependent Deydrogenase; Dehydrogenase And Relate Protein; Hydrogenase; Dehydrogenases Related Protein
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MNKFMKEVNKQSCPTGISRREFLGMAATGAAALTILPSFTVAGLGHVAPSDKLYIAKIGCGGMGAADLGSLMNTPHKNAA ITCLCDVDDRQSADARKKYPKAKYFNDFREMYDKEGKNFDAVCISTPDHNHAIQAFGAMRMGKHVYLQKPIAHDIYEARI LTEAAKKYKVVTQMGDQGNSCDGMRTLREWFEADLLGDIQKVYCWTNRPVWPQGIPWPSQKPEVPKGLNWDLWVGTAEYV DYIDNLVPFNWRGWWRFGTGALGDMGCHIIGPPFKLLQLGYPTEVSCSTTNVYSGIFEEAYYPESCPVASSIRYKFKKKD GSDLNLYWMDGGIMPERFEEIDPDADMTCTMGDLDMMDVEGATVFVGTKGMASCGWGGSDPRFWPKGQKANKKPLFDKDV NIPHKYKRIEGGTNGHYWAWIDSCIAGYDKADVESPFEGYAGPLTETVLMGNLILRSYNIREQVKHNDSIYGEREGFIYP GRNKTFQWDGANMRITNFEQANQFIKRKYRDGWEDLKL
Sequences:
>Translated_518_residues MNKFMKEVNKQSCPTGISRREFLGMAATGAAALTILPSFTVAGLGHVAPSDKLYIAKIGCGGMGAADLGSLMNTPHKNAA ITCLCDVDDRQSADARKKYPKAKYFNDFREMYDKEGKNFDAVCISTPDHNHAIQAFGAMRMGKHVYLQKPIAHDIYEARI LTEAAKKYKVVTQMGDQGNSCDGMRTLREWFEADLLGDIQKVYCWTNRPVWPQGIPWPSQKPEVPKGLNWDLWVGTAEYV DYIDNLVPFNWRGWWRFGTGALGDMGCHIIGPPFKLLQLGYPTEVSCSTTNVYSGIFEEAYYPESCPVASSIRYKFKKKD GSDLNLYWMDGGIMPERFEEIDPDADMTCTMGDLDMMDVEGATVFVGTKGMASCGWGGSDPRFWPKGQKANKKPLFDKDV NIPHKYKRIEGGTNGHYWAWIDSCIAGYDKADVESPFEGYAGPLTETVLMGNLILRSYNIREQVKHNDSIYGEREGFIYP GRNKTFQWDGANMRITNFEQANQFIKRKYRDGWEDLKL >Mature_518_residues MNKFMKEVNKQSCPTGISRREFLGMAATGAAALTILPSFTVAGLGHVAPSDKLYIAKIGCGGMGAADLGSLMNTPHKNAA ITCLCDVDDRQSADARKKYPKAKYFNDFREMYDKEGKNFDAVCISTPDHNHAIQAFGAMRMGKHVYLQKPIAHDIYEARI LTEAAKKYKVVTQMGDQGNSCDGMRTLREWFEADLLGDIQKVYCWTNRPVWPQGIPWPSQKPEVPKGLNWDLWVGTAEYV DYIDNLVPFNWRGWWRFGTGALGDMGCHIIGPPFKLLQLGYPTEVSCSTTNVYSGIFEEAYYPESCPVASSIRYKFKKKD GSDLNLYWMDGGIMPERFEEIDPDADMTCTMGDLDMMDVEGATVFVGTKGMASCGWGGSDPRFWPKGQKANKKPLFDKDV NIPHKYKRIEGGTNGHYWAWIDSCIAGYDKADVESPFEGYAGPLTETVLMGNLILRSYNIREQVKHNDSIYGEREGFIYP GRNKTFQWDGANMRITNFEQANQFIKRKYRDGWEDLKL
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 58428; Mature: 58428
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKFMKEVNKQSCPTGISRREFLGMAATGAAALTILPSFTVAGLGHVAPSDKLYIAKIGC CCHHHHHHHHHCCCCCCCHHHHHCCHHCCCEEEEEECCHHHHCCCCCCCCCCEEEEEECC GGMGAADLGSLMNTPHKNAAITCLCDVDDRQSADARKKYPKAKYFNDFREMYDKEGKNFD CCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCC AVCISTPDHNHAIQAFGAMRMGKHVYLQKPIAHDIYEARILTEAAKKYKVVTQMGDQGNS EEEEECCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC CDGMRTLREWFEADLLGDIQKVYCWTNRPVWPQGIPWPSQKPEVPKGLNWDLWVGTAEYV CHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHH DYIDNLVPFNWRGWWRFGTGALGDMGCHIIGPPFKLLQLGYPTEVSCSTTNVYSGIFEEA HHHHHCCCCCCCCEEEECCCCCCCCCCEEECCCHHHHCCCCCCCCCCCCHHHHHHHHHHC YYPESCPVASSIRYKFKKKDGSDLNLYWMDGGIMPERFEEIDPDADMTCTMGDLDMMDVE CCCCCCCCHHHHHEEEECCCCCCEEEEEECCCCCHHHHHHCCCCCCCEEEECCCEEEECC GATVFVGTKGMASCGWGGSDPRFWPKGQKANKKPLFDKDVNIPHKYKRIEGGTNGHYWAW CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHH IDSCIAGYDKADVESPFEGYAGPLTETVLMGNLILRSYNIREQVKHNDSIYGEREGFIYP HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEC GRNKTFQWDGANMRITNFEQANQFIKRKYRDGWEDLKL CCCCEEEECCCCEEECCHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MNKFMKEVNKQSCPTGISRREFLGMAATGAAALTILPSFTVAGLGHVAPSDKLYIAKIGC CCHHHHHHHHHCCCCCCCHHHHHCCHHCCCEEEEEECCHHHHCCCCCCCCCCEEEEEECC GGMGAADLGSLMNTPHKNAAITCLCDVDDRQSADARKKYPKAKYFNDFREMYDKEGKNFD CCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCC AVCISTPDHNHAIQAFGAMRMGKHVYLQKPIAHDIYEARILTEAAKKYKVVTQMGDQGNS EEEEECCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC CDGMRTLREWFEADLLGDIQKVYCWTNRPVWPQGIPWPSQKPEVPKGLNWDLWVGTAEYV CHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHH DYIDNLVPFNWRGWWRFGTGALGDMGCHIIGPPFKLLQLGYPTEVSCSTTNVYSGIFEEA HHHHHCCCCCCCCEEEECCCCCCCCCCEEECCCHHHHCCCCCCCCCCCCHHHHHHHHHHC YYPESCPVASSIRYKFKKKDGSDLNLYWMDGGIMPERFEEIDPDADMTCTMGDLDMMDVE CCCCCCCCHHHHHEEEECCCCCCEEEEEECCCCCHHHHHHCCCCCCCEEEECCCEEEECC GATVFVGTKGMASCGWGGSDPRFWPKGQKANKKPLFDKDVNIPHKYKRIEGGTNGHYWAW CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHH IDSCIAGYDKADVESPFEGYAGPLTETVLMGNLILRSYNIREQVKHNDSIYGEREGFIYP HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEC GRNKTFQWDGANMRITNFEQANQFIKRKYRDGWEDLKL CCCCEEEECCCCEEECCHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA