Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is yjhC [C]

Identifier: 150009462

GI number: 150009462

Start: 3425801

End: 3427357

Strand: Direct

Name: yjhC [C]

Synonym: BDI_2875

Alternate gene names: 150009462

Gene position: 3425801-3427357 (Clockwise)

Preceding gene: 150009461

Following gene: 150009463

Centisome position: 71.2

GC content: 50.67

Gene sequence:

>1557_bases
ATGAACAAATTTATGAAAGAGGTAAATAAACAATCCTGTCCGACTGGAATCTCGAGAAGGGAATTCCTTGGGATGGCAGC
CACAGGTGCTGCCGCCCTTACGATCCTGCCCAGTTTTACCGTAGCGGGATTAGGACACGTAGCTCCCAGCGATAAGCTTT
ATATCGCGAAAATAGGCTGTGGCGGTATGGGAGCCGCCGATTTGGGTAGCTTGATGAATACGCCGCACAAAAACGCAGCG
ATCACCTGTCTGTGCGACGTAGACGACCGTCAGTCTGCCGACGCTCGTAAGAAATACCCGAAGGCGAAGTATTTCAACGA
CTTCCGTGAGATGTACGACAAGGAAGGCAAGAACTTCGATGCCGTATGTATCTCCACCCCGGATCATAACCATGCGATCC
AAGCTTTCGGCGCTATGCGGATGGGTAAGCACGTATATCTGCAAAAACCGATCGCGCACGATATTTACGAGGCACGTATC
CTTACCGAGGCCGCCAAGAAATACAAGGTCGTGACCCAAATGGGCGACCAAGGTAACTCTTGCGACGGTATGCGTACCCT
TCGTGAATGGTTCGAGGCAGATCTGTTAGGTGACATCCAGAAGGTATATTGCTGGACCAACCGTCCTGTATGGCCGCAAG
GTATTCCTTGGCCGAGCCAGAAGCCTGAGGTTCCCAAGGGATTAAATTGGGACTTATGGGTAGGTACCGCCGAGTATGTG
GATTATATCGATAATCTTGTTCCGTTCAACTGGCGTGGTTGGTGGCGTTTCGGTACAGGCGCTCTTGGAGATATGGGTTG
CCACATCATCGGCCCTCCATTCAAATTGCTTCAATTAGGTTATCCGACTGAGGTTTCTTGCAGCACGACCAATGTCTACT
CCGGTATCTTCGAGGAGGCTTATTATCCTGAGAGTTGCCCGGTAGCCAGCTCGATCCGTTATAAATTCAAGAAGAAAGAC
GGAAGCGACCTGAATCTCTATTGGATGGACGGTGGTATCATGCCGGAGCGTTTCGAGGAGATCGATCCGGATGCAGACAT
GACCTGCACGATGGGAGACTTGGATATGATGGACGTAGAAGGCGCAACCGTATTCGTAGGTACGAAAGGTATGGCTTCTT
GCGGCTGGGGCGGTTCCGACCCGAGATTCTGGCCAAAGGGACAGAAGGCGAACAAGAAACCGCTGTTCGACAAGGACGTG
AACATTCCTCATAAATACAAACGTATCGAAGGCGGCACGAACGGTCATTACTGGGCGTGGATCGACTCTTGTATCGCAGG
ATACGACAAGGCGGACGTAGAATCACCATTCGAAGGTTACGCCGGTCCGTTGACGGAGACCGTATTGATGGGTAACCTGA
TCTTACGCAGCTATAATATCCGGGAACAAGTGAAACATAACGACTCGATCTACGGAGAACGCGAGGGCTTTATCTATCCG
GGAAGAAACAAAACTTTCCAGTGGGACGGAGCGAACATGCGTATCACCAACTTCGAGCAAGCGAACCAATTCATCAAGCG
GAAATACCGCGATGGATGGGAAGATCTCAAGTTATAA

Upstream 100 bases:

>100_bases
TAATAATTTGGTTCAGAACCCGGGATATCCGGCATTCTAATCATATCAGTCTGTTTTTAATATCAATTCTTTAGACCCCA
ATTCAATTATTAATCATAAT

Downstream 100 bases:

>100_bases
AAGCGAACAACAATGGGATGAGACGGGGCACACCCCGTCTCTACAACTAGATAATTTACTTAAATAACTATACAAAGATG
AAAAAGATTTATAGCAGTAT

Product: putative dehydrogenase

Products: NA

Alternate protein names: Oxidoreductase Domain-Containing Protein; NADH-Dependent Dehydrogenase; Oxidoreductase; Dehydrogenase; NADH-Dependent Dyhydrogenase; Dehydrogenase-Like Protein; NADH-Dependent Dehydrogenase-Like Protein; NADH-Dependent Dihydrogenase; NADH-Dependent Deydrogenase; Dehydrogenase And Relate Protein; Hydrogenase; Dehydrogenases Related Protein

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MNKFMKEVNKQSCPTGISRREFLGMAATGAAALTILPSFTVAGLGHVAPSDKLYIAKIGCGGMGAADLGSLMNTPHKNAA
ITCLCDVDDRQSADARKKYPKAKYFNDFREMYDKEGKNFDAVCISTPDHNHAIQAFGAMRMGKHVYLQKPIAHDIYEARI
LTEAAKKYKVVTQMGDQGNSCDGMRTLREWFEADLLGDIQKVYCWTNRPVWPQGIPWPSQKPEVPKGLNWDLWVGTAEYV
DYIDNLVPFNWRGWWRFGTGALGDMGCHIIGPPFKLLQLGYPTEVSCSTTNVYSGIFEEAYYPESCPVASSIRYKFKKKD
GSDLNLYWMDGGIMPERFEEIDPDADMTCTMGDLDMMDVEGATVFVGTKGMASCGWGGSDPRFWPKGQKANKKPLFDKDV
NIPHKYKRIEGGTNGHYWAWIDSCIAGYDKADVESPFEGYAGPLTETVLMGNLILRSYNIREQVKHNDSIYGEREGFIYP
GRNKTFQWDGANMRITNFEQANQFIKRKYRDGWEDLKL

Sequences:

>Translated_518_residues
MNKFMKEVNKQSCPTGISRREFLGMAATGAAALTILPSFTVAGLGHVAPSDKLYIAKIGCGGMGAADLGSLMNTPHKNAA
ITCLCDVDDRQSADARKKYPKAKYFNDFREMYDKEGKNFDAVCISTPDHNHAIQAFGAMRMGKHVYLQKPIAHDIYEARI
LTEAAKKYKVVTQMGDQGNSCDGMRTLREWFEADLLGDIQKVYCWTNRPVWPQGIPWPSQKPEVPKGLNWDLWVGTAEYV
DYIDNLVPFNWRGWWRFGTGALGDMGCHIIGPPFKLLQLGYPTEVSCSTTNVYSGIFEEAYYPESCPVASSIRYKFKKKD
GSDLNLYWMDGGIMPERFEEIDPDADMTCTMGDLDMMDVEGATVFVGTKGMASCGWGGSDPRFWPKGQKANKKPLFDKDV
NIPHKYKRIEGGTNGHYWAWIDSCIAGYDKADVESPFEGYAGPLTETVLMGNLILRSYNIREQVKHNDSIYGEREGFIYP
GRNKTFQWDGANMRITNFEQANQFIKRKYRDGWEDLKL
>Mature_518_residues
MNKFMKEVNKQSCPTGISRREFLGMAATGAAALTILPSFTVAGLGHVAPSDKLYIAKIGCGGMGAADLGSLMNTPHKNAA
ITCLCDVDDRQSADARKKYPKAKYFNDFREMYDKEGKNFDAVCISTPDHNHAIQAFGAMRMGKHVYLQKPIAHDIYEARI
LTEAAKKYKVVTQMGDQGNSCDGMRTLREWFEADLLGDIQKVYCWTNRPVWPQGIPWPSQKPEVPKGLNWDLWVGTAEYV
DYIDNLVPFNWRGWWRFGTGALGDMGCHIIGPPFKLLQLGYPTEVSCSTTNVYSGIFEEAYYPESCPVASSIRYKFKKKD
GSDLNLYWMDGGIMPERFEEIDPDADMTCTMGDLDMMDVEGATVFVGTKGMASCGWGGSDPRFWPKGQKANKKPLFDKDV
NIPHKYKRIEGGTNGHYWAWIDSCIAGYDKADVESPFEGYAGPLTETVLMGNLILRSYNIREQVKHNDSIYGEREGFIYP
GRNKTFQWDGANMRITNFEQANQFIKRKYRDGWEDLKL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 58428; Mature: 58428

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFMKEVNKQSCPTGISRREFLGMAATGAAALTILPSFTVAGLGHVAPSDKLYIAKIGC
CCHHHHHHHHHCCCCCCCHHHHHCCHHCCCEEEEEECCHHHHCCCCCCCCCCEEEEEECC
GGMGAADLGSLMNTPHKNAAITCLCDVDDRQSADARKKYPKAKYFNDFREMYDKEGKNFD
CCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCC
AVCISTPDHNHAIQAFGAMRMGKHVYLQKPIAHDIYEARILTEAAKKYKVVTQMGDQGNS
EEEEECCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
CDGMRTLREWFEADLLGDIQKVYCWTNRPVWPQGIPWPSQKPEVPKGLNWDLWVGTAEYV
CHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHH
DYIDNLVPFNWRGWWRFGTGALGDMGCHIIGPPFKLLQLGYPTEVSCSTTNVYSGIFEEA
HHHHHCCCCCCCCEEEECCCCCCCCCCEEECCCHHHHCCCCCCCCCCCCHHHHHHHHHHC
YYPESCPVASSIRYKFKKKDGSDLNLYWMDGGIMPERFEEIDPDADMTCTMGDLDMMDVE
CCCCCCCCHHHHHEEEECCCCCCEEEEEECCCCCHHHHHHCCCCCCCEEEECCCEEEECC
GATVFVGTKGMASCGWGGSDPRFWPKGQKANKKPLFDKDVNIPHKYKRIEGGTNGHYWAW
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHH
IDSCIAGYDKADVESPFEGYAGPLTETVLMGNLILRSYNIREQVKHNDSIYGEREGFIYP
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEC
GRNKTFQWDGANMRITNFEQANQFIKRKYRDGWEDLKL
CCCCEEEECCCCEEECCHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MNKFMKEVNKQSCPTGISRREFLGMAATGAAALTILPSFTVAGLGHVAPSDKLYIAKIGC
CCHHHHHHHHHCCCCCCCHHHHHCCHHCCCEEEEEECCHHHHCCCCCCCCCCEEEEEECC
GGMGAADLGSLMNTPHKNAAITCLCDVDDRQSADARKKYPKAKYFNDFREMYDKEGKNFD
CCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCC
AVCISTPDHNHAIQAFGAMRMGKHVYLQKPIAHDIYEARILTEAAKKYKVVTQMGDQGNS
EEEEECCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
CDGMRTLREWFEADLLGDIQKVYCWTNRPVWPQGIPWPSQKPEVPKGLNWDLWVGTAEYV
CHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHH
DYIDNLVPFNWRGWWRFGTGALGDMGCHIIGPPFKLLQLGYPTEVSCSTTNVYSGIFEEA
HHHHHCCCCCCCCEEEECCCCCCCCCCEEECCCHHHHCCCCCCCCCCCCHHHHHHHHHHC
YYPESCPVASSIRYKFKKKDGSDLNLYWMDGGIMPERFEEIDPDADMTCTMGDLDMMDVE
CCCCCCCCHHHHHEEEECCCCCCEEEEEECCCCCHHHHHHCCCCCCCEEEECCCEEEECC
GATVFVGTKGMASCGWGGSDPRFWPKGQKANKKPLFDKDVNIPHKYKRIEGGTNGHYWAW
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHH
IDSCIAGYDKADVESPFEGYAGPLTETVLMGNLILRSYNIREQVKHNDSIYGEREGFIYP
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEC
GRNKTFQWDGANMRITNFEQANQFIKRKYRDGWEDLKL
CCCCEEEECCCCEEECCHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA