| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009461
Identifier: 150009461
GI number: 150009461
Start: 3424172
End: 3425740
Strand: Direct
Name: 150009461
Synonym: BDI_2874
Alternate gene names: NA
Gene position: 3424172-3425740 (Clockwise)
Preceding gene: 150009460
Following gene: 150009462
Centisome position: 71.17
GC content: 47.1
Gene sequence:
>1569_bases ATGAAAAGATTATTCAAAAATATAATATGTGCCGTACTCGCTCCGGTAGCACTTGTCTCTTGCATGGATTTGGACGAGAA CGTATACGACAAGCTTCCTACCGACGAATTCGGGACAACAGAAAAGCAGATTAATGCGATCATGGCTCCGGCATACCAAT CCCTAAAGAACATGCTGGCTTATGACGGTCCTTGGGGAGCGGCCGATATGACAGCCGATATCTTGATAGCACCTACACGT GTAGGTGGCGACTGGTGGGACGGCGGACAATACATGGAACAATGTATGCACAGTTGGAAACCGAACTCTTACTCCGTAGA GAATTGCTGGACATATTGTACGGAAGGTTTAACCACAGTTAATTCCGTATATAATATTATAGAGAAAAGCGAGGCGATGA GCGATGAACTTAAGCTTCAATACTTGTCTGAGCTAAGAGGATTACGCGCTTTCTGGTATTATGTAATCGTAGATATTTTC GGTAACGCTCCATTAGTGACAGATTTTGAGGATACCTCCTTGCCCTCCATCACGAGCCGTGCGGATCTGTATAAATACGT GGTGAAGGAATTAACCGAGATCATCCCGAACCTGCGCTCCGATGTATCAGACGCCAGCTACGGTAAGTTCACGCAAGGGG CTGCCCGTATGGTATTGGCAAAGATGTACCTCAACGCCGAGGAATGGATCGGCGAGCCGAACTGGAAAGGTGTAGTGGAG CAGTGCGACGAGATCATGAAACTCGAATATATCATCGAGCCGAATTGGAAAACCAATTTCGAGGTTCATAACGAGGTATC ACGAGAGATTATTTTCCCGATCTGCTACAAGGCATCTGATGCTTGGGGTAACTCCATTCATCTTTGGACATTGCATTATC TGGATCCCGATGTATTAGGTTTCACCGGCGGTATGTGGAATGGTATCAACGCCCAGCCGGATTTTGTCCGCACATTTGAT ACGGAAGATCCTCGTTACGAAGGTTCGTTCTTGATTGGCCCGATGATCGACCCTAGCACGGGAGAGATTTTGAAAACGAC CCTAGGACATGACTTGATCCATACGATCGACTTAAATGTGGTACCGGGAACTGAGAAAACCGATGCGGATGGTAACTTAA CCCCGTGGGGCGAGGTTCACCAAGAAGACGGCGCACGTATCAATAAGTGGGTATATGAGAAAGGCATGCAAAATACCAAT ATGGAGAACGATATCGCTATCTTCCGTCTGGCCGATGTATACCTGATGAAAGCGGAAGCCTTGGTTCGTATGGGCGGGGA TCTCGGTGAAGCTACTCGTCTGGTAAACGCTATCCGGGAAAGGGCTTACGGCAATTCCGATCATAATTACACGAGCGTGA CATTGGACGATATCTATAACGAGCGTGGTTATGAGTTGGCATTCGAATTTGTCCGCCGCCAAGATATGATCCGCTTCGGG ACTTATCTGAAACCGAGATATATGAAGCCGAAACAGACTCCGGAATATCGTAAGATCTTCCCGATCCCGTTCAAGGCTTG GCAGAAGAATAATAATTTGGTTCAGAACCCGGGATATCCGGCATTCTAA
Upstream 100 bases:
>100_bases GGTTTAACCCCGGGTGTAGAACCTCGTGAATTTTATCCGAAGGCACGCACATTCTCTGTTGGATTAAACTTGAATTTCTA ATACACAAACAGTAACGATC
Downstream 100 bases:
>100_bases TCATATCAGTCTGTTTTTAATATCAATTCTTTAGACCCCAATTCAATTATTAATCATAATATGAACAAATTTATGAAAGA GGTAAATAAACAATCCTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 522; Mature: 522
Protein sequence:
>522_residues MKRLFKNIICAVLAPVALVSCMDLDENVYDKLPTDEFGTTEKQINAIMAPAYQSLKNMLAYDGPWGAADMTADILIAPTR VGGDWWDGGQYMEQCMHSWKPNSYSVENCWTYCTEGLTTVNSVYNIIEKSEAMSDELKLQYLSELRGLRAFWYYVIVDIF GNAPLVTDFEDTSLPSITSRADLYKYVVKELTEIIPNLRSDVSDASYGKFTQGAARMVLAKMYLNAEEWIGEPNWKGVVE QCDEIMKLEYIIEPNWKTNFEVHNEVSREIIFPICYKASDAWGNSIHLWTLHYLDPDVLGFTGGMWNGINAQPDFVRTFD TEDPRYEGSFLIGPMIDPSTGEILKTTLGHDLIHTIDLNVVPGTEKTDADGNLTPWGEVHQEDGARINKWVYEKGMQNTN MENDIAIFRLADVYLMKAEALVRMGGDLGEATRLVNAIRERAYGNSDHNYTSVTLDDIYNERGYELAFEFVRRQDMIRFG TYLKPRYMKPKQTPEYRKIFPIPFKAWQKNNNLVQNPGYPAF
Sequences:
>Translated_522_residues MKRLFKNIICAVLAPVALVSCMDLDENVYDKLPTDEFGTTEKQINAIMAPAYQSLKNMLAYDGPWGAADMTADILIAPTR VGGDWWDGGQYMEQCMHSWKPNSYSVENCWTYCTEGLTTVNSVYNIIEKSEAMSDELKLQYLSELRGLRAFWYYVIVDIF GNAPLVTDFEDTSLPSITSRADLYKYVVKELTEIIPNLRSDVSDASYGKFTQGAARMVLAKMYLNAEEWIGEPNWKGVVE QCDEIMKLEYIIEPNWKTNFEVHNEVSREIIFPICYKASDAWGNSIHLWTLHYLDPDVLGFTGGMWNGINAQPDFVRTFD TEDPRYEGSFLIGPMIDPSTGEILKTTLGHDLIHTIDLNVVPGTEKTDADGNLTPWGEVHQEDGARINKWVYEKGMQNTN MENDIAIFRLADVYLMKAEALVRMGGDLGEATRLVNAIRERAYGNSDHNYTSVTLDDIYNERGYELAFEFVRRQDMIRFG TYLKPRYMKPKQTPEYRKIFPIPFKAWQKNNNLVQNPGYPAF >Mature_522_residues MKRLFKNIICAVLAPVALVSCMDLDENVYDKLPTDEFGTTEKQINAIMAPAYQSLKNMLAYDGPWGAADMTADILIAPTR VGGDWWDGGQYMEQCMHSWKPNSYSVENCWTYCTEGLTTVNSVYNIIEKSEAMSDELKLQYLSELRGLRAFWYYVIVDIF GNAPLVTDFEDTSLPSITSRADLYKYVVKELTEIIPNLRSDVSDASYGKFTQGAARMVLAKMYLNAEEWIGEPNWKGVVE QCDEIMKLEYIIEPNWKTNFEVHNEVSREIIFPICYKASDAWGNSIHLWTLHYLDPDVLGFTGGMWNGINAQPDFVRTFD TEDPRYEGSFLIGPMIDPSTGEILKTTLGHDLIHTIDLNVVPGTEKTDADGNLTPWGEVHQEDGARINKWVYEKGMQNTN MENDIAIFRLADVYLMKAEALVRMGGDLGEATRLVNAIRERAYGNSDHNYTSVTLDDIYNERGYELAFEFVRRQDMIRFG TYLKPRYMKPKQTPEYRKIFPIPFKAWQKNNNLVQNPGYPAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59714; Mature: 59714
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLFKNIICAVLAPVALVSCMDLDENVYDKLPTDEFGTTEKQINAIMAPAYQSLKNMLA CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YDGPWGAADMTADILIAPTRVGGDWWDGGQYMEQCMHSWKPNSYSVENCWTYCTEGLTTV CCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH NSVYNIIEKSEAMSDELKLQYLSELRGLRAFWYYVIVDIFGNAPLVTDFEDTSLPSITSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHH ADLYKYVVKELTEIIPNLRSDVSDASYGKFTQGAARMVLAKMYLNAEEWIGEPNWKGVVE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHH QCDEIMKLEYIIEPNWKTNFEVHNEVSREIIFPICYKASDAWGNSIHLWTLHYLDPDVLG HHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCCHHC FTGGMWNGINAQPDFVRTFDTEDPRYEGSFLIGPMIDPSTGEILKTTLGHDLIHTIDLNV CCCCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHCCHHEEEEEEEE VPGTEKTDADGNLTPWGEVHQEDGARINKWVYEKGMQNTNMENDIAIFRLADVYLMKAEA ECCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHH LVRMGGDLGEATRLVNAIRERAYGNSDHNYTSVTLDDIYNERGYELAFEFVRRQDMIRFG HHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHH TYLKPRYMKPKQTPEYRKIFPIPFKAWQKNNNLVQNPGYPAF CCCCCCCCCCCCCCCCCEEECCCHHHHCCCCCEECCCCCCCC >Mature Secondary Structure MKRLFKNIICAVLAPVALVSCMDLDENVYDKLPTDEFGTTEKQINAIMAPAYQSLKNMLA CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YDGPWGAADMTADILIAPTRVGGDWWDGGQYMEQCMHSWKPNSYSVENCWTYCTEGLTTV CCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH NSVYNIIEKSEAMSDELKLQYLSELRGLRAFWYYVIVDIFGNAPLVTDFEDTSLPSITSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHH ADLYKYVVKELTEIIPNLRSDVSDASYGKFTQGAARMVLAKMYLNAEEWIGEPNWKGVVE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHH QCDEIMKLEYIIEPNWKTNFEVHNEVSREIIFPICYKASDAWGNSIHLWTLHYLDPDVLG HHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCCHHC FTGGMWNGINAQPDFVRTFDTEDPRYEGSFLIGPMIDPSTGEILKTTLGHDLIHTIDLNV CCCCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHCCHHEEEEEEEE VPGTEKTDADGNLTPWGEVHQEDGARINKWVYEKGMQNTNMENDIAIFRLADVYLMKAEA ECCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHH LVRMGGDLGEATRLVNAIRERAYGNSDHNYTSVTLDDIYNERGYELAFEFVRRQDMIRFG HHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHH TYLKPRYMKPKQTPEYRKIFPIPFKAWQKNNNLVQNPGYPAF CCCCCCCCCCCCCCCCCEEECCCHHHHCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA