| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009402
Identifier: 150009402
GI number: 150009402
Start: 3352456
End: 3354516
Strand: Reverse
Name: 150009402
Synonym: BDI_2810
Alternate gene names: NA
Gene position: 3354516-3352456 (Counterclockwise)
Preceding gene: 150009409
Following gene: 150009401
Centisome position: 69.72
GC content: 46.58
Gene sequence:
>2061_bases ATGAATGAAATGTTGAGATACACGATCATTCGTGTCATTCTGTTTGTAATGGGAGGCTTTCTTGTTCTCGGATGTTCGGA TGAAGATGATGTGGGTAATAGTGGAGGAACGAGTAAATATGGTTTGATACGGATGGCGGAGGAGGATTATGATTCGTCGA ATACTTCTTACATCCTTCAGGATGAGGAACCGGACGAGGTTCTTTTCGATTCGTCAAAGCGAAAATTCAAGGTGAATGAG CCTTTGCAGGTGTCAGTTACCGGGCAGAAGGAGTTGATGCTTCGTTTCTATTCTCCTAGAGCTATCCATAATGTGATTGT CTGGGCTACGGTTGAGGGTTATGAGGATGAGGTACGGTTTGCGGAGTTTACTACGGTTTTACCTTTTCAGGAGTTTAAAA TGAAGTTGCCTTTTCTAGAACGGGCGAAGGTTTATTATACACGTTCCGGCGAGGAGGTTACCATAGATGCCCATCCGGAT ATCGTGGCCGAGAATATAAGTTTGCGGGTTGAATGTGGAGATCCGGTCTATCAAGGAATGATAAACGTGAAACCTAAGTG GGATATTTGGTTTGGTAAATATTCCGGTTCGAACTGGGGCAACTTTAGGCCACATCTGGCTCGTGAGGCGGTTGCCCTTT CCTTGAATATGGCCGCGATGTTTTCTTCCTCGCTTTTTGATGAGGAACTGGAGAAGTGGCGTGGCAAGCTGATAAATAAC GAGCAAATCGTGGATATAGATGTGTTGAAGAAACAGATCACGAATCATGGCGGGTTGTGTTATGGACGCGTGGTGAATGT TGTCGGTCTGGGTGGAGGAAATACCTTTGGGCTAGGTGAATATGTCTATCTGACCCATTATGCCGACGATGCCAATGGTT CTGACACGCCGTATCATGAGCTGGCACACTGCTTGGGGTATGGGCATAGTGGGAATATGACGTACTATCCGGCGGAAGGC GGTTTCCCTACAATTTGTATGAAGGTTTACTCACAGCTTTCCGTGAGCAAGAAATTACCGGTTTATTCCCGCCGTTTCTT GCATACCCGGAGGAATAAGAATCTGGTAGAGAATAAAAACGTGTATACTTCCTCGAAATACATTATCGATGATCCGGAAT TGGATGCCATAGATGGCGGGCTTGGGCTTGCTCCGATGGAGACGGATAGGGCTGGTGATGAGGGTTCTCCTCTCTCATTT ACACTTTCTGTCTTGGATATTCCCGGTGCCACTGTGGAAACTTTTCATCCGAAAGCGGTCCATCTTTATGGGAATACGCT ATATGTAGCAAATGACGCTCCGGGACATTATAGTTTGGAGGTCTTTGATGTATCTTCCGGTAATGTGCGTCATGTGAAAA GTATGGTTGAGTGGATGAACGGAGATAAGAAAGAGACCTTTGCGGGGGAGCCAAACGGCGTGACTCGCTCGTATGGGAAA ATATATGTCACGAATACGGGAAGCCGTACGGATGTGTTTGATGCGGAAACGTATGAGTTCATTACTTGTATCGGTACGGG TACTTGGGGTGAGGGTGGTTATCAGACCGTTCATGCGTTTGATGTGACGGCTAGTCAAGGGGCTGTCTTTATCCGGGATA AACGGAAACTGGTAGTTGTCTTGGAGCAAGATGTACAGCCCGGTTCCGCTGCTCGGGTACCTATATATAGCCGTAGCGTA AATTTACAAGAGGCAATGGGTACTTATGCAGTAGCGGCACGAAATGATGGCTTTTTATATGTGACGGCCCAGAATAAAAA TATAATCTATTTGTTCGATCCTGCGGACATTCGGGCAGGGGACACGGGCTTTGCGCCGTATCTGGTGACATTGGGATTTG AAAAGTCTCCCCAGTCGATAGCGTTTGTAGGGGATCGTTTGTTTGTTACGCTTCGTGTCGATGATAAACGGTCGGAGCTA TGGGAGATCAGCCCTAAGAACGGAAAATTATTGCAGGACTTTACAGATTCGATGGTCTATCCCGAGAAAATAGCCGGTGC TCGTCATACTTTATTGGTAGTGGATCGTGCGACCCAGACAGTAAAAGCCATTGGCCTATGA
Upstream 100 bases:
>100_bases CTACATCTGTCTACGGGGCAAAATTACATAAAAACGGTGACTTTTATGCGAGTTAAATAAAAATACTATTTTTGCGTCCA AAACTGGTAAGAGATTATTT
Downstream 100 bases:
>100_bases TTTTTTTATTGATTCTTAGGAATAAAGAAGATGGAGTTCCCGGAAAAAGTTTACATTTGCGAAAACTATTATAATAACGT ATGAAACGTGTTTTTTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 686; Mature: 686
Protein sequence:
>686_residues MNEMLRYTIIRVILFVMGGFLVLGCSDEDDVGNSGGTSKYGLIRMAEEDYDSSNTSYILQDEEPDEVLFDSSKRKFKVNE PLQVSVTGQKELMLRFYSPRAIHNVIVWATVEGYEDEVRFAEFTTVLPFQEFKMKLPFLERAKVYYTRSGEEVTIDAHPD IVAENISLRVECGDPVYQGMINVKPKWDIWFGKYSGSNWGNFRPHLAREAVALSLNMAAMFSSSLFDEELEKWRGKLINN EQIVDIDVLKKQITNHGGLCYGRVVNVVGLGGGNTFGLGEYVYLTHYADDANGSDTPYHELAHCLGYGHSGNMTYYPAEG GFPTICMKVYSQLSVSKKLPVYSRRFLHTRRNKNLVENKNVYTSSKYIIDDPELDAIDGGLGLAPMETDRAGDEGSPLSF TLSVLDIPGATVETFHPKAVHLYGNTLYVANDAPGHYSLEVFDVSSGNVRHVKSMVEWMNGDKKETFAGEPNGVTRSYGK IYVTNTGSRTDVFDAETYEFITCIGTGTWGEGGYQTVHAFDVTASQGAVFIRDKRKLVVVLEQDVQPGSAARVPIYSRSV NLQEAMGTYAVAARNDGFLYVTAQNKNIIYLFDPADIRAGDTGFAPYLVTLGFEKSPQSIAFVGDRLFVTLRVDDKRSEL WEISPKNGKLLQDFTDSMVYPEKIAGARHTLLVVDRATQTVKAIGL
Sequences:
>Translated_686_residues MNEMLRYTIIRVILFVMGGFLVLGCSDEDDVGNSGGTSKYGLIRMAEEDYDSSNTSYILQDEEPDEVLFDSSKRKFKVNE PLQVSVTGQKELMLRFYSPRAIHNVIVWATVEGYEDEVRFAEFTTVLPFQEFKMKLPFLERAKVYYTRSGEEVTIDAHPD IVAENISLRVECGDPVYQGMINVKPKWDIWFGKYSGSNWGNFRPHLAREAVALSLNMAAMFSSSLFDEELEKWRGKLINN EQIVDIDVLKKQITNHGGLCYGRVVNVVGLGGGNTFGLGEYVYLTHYADDANGSDTPYHELAHCLGYGHSGNMTYYPAEG GFPTICMKVYSQLSVSKKLPVYSRRFLHTRRNKNLVENKNVYTSSKYIIDDPELDAIDGGLGLAPMETDRAGDEGSPLSF TLSVLDIPGATVETFHPKAVHLYGNTLYVANDAPGHYSLEVFDVSSGNVRHVKSMVEWMNGDKKETFAGEPNGVTRSYGK IYVTNTGSRTDVFDAETYEFITCIGTGTWGEGGYQTVHAFDVTASQGAVFIRDKRKLVVVLEQDVQPGSAARVPIYSRSV NLQEAMGTYAVAARNDGFLYVTAQNKNIIYLFDPADIRAGDTGFAPYLVTLGFEKSPQSIAFVGDRLFVTLRVDDKRSEL WEISPKNGKLLQDFTDSMVYPEKIAGARHTLLVVDRATQTVKAIGL >Mature_686_residues MNEMLRYTIIRVILFVMGGFLVLGCSDEDDVGNSGGTSKYGLIRMAEEDYDSSNTSYILQDEEPDEVLFDSSKRKFKVNE PLQVSVTGQKELMLRFYSPRAIHNVIVWATVEGYEDEVRFAEFTTVLPFQEFKMKLPFLERAKVYYTRSGEEVTIDAHPD IVAENISLRVECGDPVYQGMINVKPKWDIWFGKYSGSNWGNFRPHLAREAVALSLNMAAMFSSSLFDEELEKWRGKLINN EQIVDIDVLKKQITNHGGLCYGRVVNVVGLGGGNTFGLGEYVYLTHYADDANGSDTPYHELAHCLGYGHSGNMTYYPAEG GFPTICMKVYSQLSVSKKLPVYSRRFLHTRRNKNLVENKNVYTSSKYIIDDPELDAIDGGLGLAPMETDRAGDEGSPLSF TLSVLDIPGATVETFHPKAVHLYGNTLYVANDAPGHYSLEVFDVSSGNVRHVKSMVEWMNGDKKETFAGEPNGVTRSYGK IYVTNTGSRTDVFDAETYEFITCIGTGTWGEGGYQTVHAFDVTASQGAVFIRDKRKLVVVLEQDVQPGSAARVPIYSRSV NLQEAMGTYAVAARNDGFLYVTAQNKNIIYLFDPADIRAGDTGFAPYLVTLGFEKSPQSIAFVGDRLFVTLRVDDKRSEL WEISPKNGKLLQDFTDSMVYPEKIAGARHTLLVVDRATQTVKAIGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76488; Mature: 76488
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEMLRYTIIRVILFVMGGFLVLGCSDEDDVGNSGGTSKYGLIRMAEEDYDSSNTSYILQ CCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEE DEEPDEVLFDSSKRKFKVNEPLQVSVTGQKELMLRFYSPRAIHNVIVWATVEGYEDEVRF CCCCCHHEECCCCCEEECCCCEEEEECCCCEEEEEECCCCCEEEEEEEEEECCCCCCEEE AEFTTVLPFQEFKMKLPFLERAKVYYTRSGEEVTIDAHPDIVAENISLRVECGDPVYQGM EEEEEECCHHHHHCCCCCHHCEEEEEEECCCEEEEECCCCEEECCEEEEEEECCHHHCCE INVKPKWDIWFGKYSGSNWGNFRPHLAREAVALSLNMAAMFSSSLFDEELEKWRGKLINN EECCCCEEEEEEEECCCCCCCCCCHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCC EQIVDIDVLKKQITNHGGLCYGRVVNVVGLGGGNTFGLGEYVYLTHYADDANGSDTPYHE CEEEEHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCHHH LAHCLGYGHSGNMTYYPAEGGFPTICMKVYSQLSVSKKLPVYSRRFLHTRRNKNLVENKN HHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC VYTSSKYIIDDPELDAIDGGLGLAPMETDRAGDEGSPLSFTLSVLDIPGATVETFHPKAV EEECCEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEECCCCCEE HLYGNTLYVANDAPGHYSLEVFDVSSGNVRHVKSMVEWMNGDKKETFAGEPNGVTRSYGK EEECCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCE IYVTNTGSRTDVFDAETYEFITCIGTGTWGEGGYQTVHAFDVTASQGAVFIRDKRKLVVV EEEECCCCCCEECCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCCCEEEEECCCEEEEE LEQDVQPGSAARVPIYSRSVNLQEAMGTYAVAARNDGFLYVTAQNKNIIYLFDPADIRAG EECCCCCCCCEECEEEECCCCHHHHCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCC DTGFAPYLVTLGFEKSPQSIAFVGDRLFVTLRVDDKRSELWEISPKNGKLLQDFTDSMVY CCCCCCEEEEECCCCCCCEEEEEECEEEEEEEECCCCCCEEEECCCCCCCHHHHHHCCCC PEKIAGARHTLLVVDRATQTVKAIGL HHHHCCCCEEEEEEECCCCEEHCCCC >Mature Secondary Structure MNEMLRYTIIRVILFVMGGFLVLGCSDEDDVGNSGGTSKYGLIRMAEEDYDSSNTSYILQ CCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEE DEEPDEVLFDSSKRKFKVNEPLQVSVTGQKELMLRFYSPRAIHNVIVWATVEGYEDEVRF CCCCCHHEECCCCCEEECCCCEEEEECCCCEEEEEECCCCCEEEEEEEEEECCCCCCEEE AEFTTVLPFQEFKMKLPFLERAKVYYTRSGEEVTIDAHPDIVAENISLRVECGDPVYQGM EEEEEECCHHHHHCCCCCHHCEEEEEEECCCEEEEECCCCEEECCEEEEEEECCHHHCCE INVKPKWDIWFGKYSGSNWGNFRPHLAREAVALSLNMAAMFSSSLFDEELEKWRGKLINN EECCCCEEEEEEEECCCCCCCCCCHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCC EQIVDIDVLKKQITNHGGLCYGRVVNVVGLGGGNTFGLGEYVYLTHYADDANGSDTPYHE CEEEEHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCHHH LAHCLGYGHSGNMTYYPAEGGFPTICMKVYSQLSVSKKLPVYSRRFLHTRRNKNLVENKN HHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC VYTSSKYIIDDPELDAIDGGLGLAPMETDRAGDEGSPLSFTLSVLDIPGATVETFHPKAV EEECCEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEECCCCCEE HLYGNTLYVANDAPGHYSLEVFDVSSGNVRHVKSMVEWMNGDKKETFAGEPNGVTRSYGK EEECCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCE IYVTNTGSRTDVFDAETYEFITCIGTGTWGEGGYQTVHAFDVTASQGAVFIRDKRKLVVV EEEECCCCCCEECCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCCCEEEEECCCEEEEE LEQDVQPGSAARVPIYSRSVNLQEAMGTYAVAARNDGFLYVTAQNKNIIYLFDPADIRAG EECCCCCCCCEECEEEECCCCHHHHCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCC DTGFAPYLVTLGFEKSPQSIAFVGDRLFVTLRVDDKRSELWEISPKNGKLLQDFTDSMVY CCCCCCEEEEECCCCCCCEEEEEECEEEEEEEECCCCCCEEEECCCCCCCHHHHHHCCCC PEKIAGARHTLLVVDRATQTVKAIGL HHHHCCCCEEEEEEECCCCEEHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA