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The map label for this gene is ycjS [H]

Identifier: 150009381

GI number: 150009381

Start: 3326849

End: 3327874

Strand: Reverse

Name: ycjS [H]

Synonym: BDI_2789

Alternate gene names: 150009381

Gene position: 3327874-3326849 (Counterclockwise)

Preceding gene: 150009382

Following gene: 150009380

Centisome position: 69.17

GC content: 48.54

Gene sequence:

>1026_bases
ATGAATAAGAAGATACGTTTCGCCGTGATCGGCTGTGGTCATATAGGTAAGCGTCATGCCGAGATGATTACCCGGGATGA
AGGGGCGGAGTTGGTCGCTTTATGTGATATCCGTCCGAAAGAGGAGCTGGGGATCGAGGCTTATGTGGTCCCTTTCGCCC
GGGATATAGATGAACTATTCCGTTTGGGATTGGATATAGATGTGGTGAATATTTGTACACCCAACGGCTTACATGCCGAG
ATGGCGATCCAAGCGATAGAGAGCGGACATCATGTGGTCATAGAAAAGCCGATGGCCTTGACCTTGGCGGATGCCGAGAA
AGTGGTTTATACCTCGTTGAGATTCCGTAAGCAGGTATTTTGCGTGATGCAAAACCGATATTCCCCGCCTTCGGTCTGGA
TCAAGGAGATGGTTGAGTCCGGAAAATTAGGCCAGATTTATATGGTGCAGCTGAATTGCTACTGGAACCGTGATGAACGC
TACTATAAACCCGGAGGATGGCATGGCGACGCTGCCTTGGATGGTGGTACCTTATTCACCCAATTTTCCCATTTCATCGA
CATTATGTACTGGTTATTCGGGGATATCTGTAATATCCAGACCCATTTCGCCGACTTCAACCACGAGAAACTGACCGCCT
TTGAGGATTCCGGTTTCGTGAATTTTAATTTCGTGAACGGTGGAATGGGCAGTTTGAGCTACTCTACGGCGGTATGGGAC
AAGAATCTGGAAAGCAGCATGCTGATCGTGGCCGAGAATGGCAGCGTGAAAATCGGCGGTCAATATATGAATGAGGTAGA
ATATTGCCATATCAAGGATTATGAGATGCCGGAATTGGCCCCTACCAACCCCGGCAATGATTATGGCCCTTACAAAGGCT
CCGCTCAAAACCACAACTTCGTGATCCGTAACGTAGTCAATGTCCTTTCCGGCGCCCCCGGCGAGATCATAACGACCAAC
GTCTTGGAAGGTATGAAGGTGGTGGATATTATACGGAGGATTTATGCGGGGAAAAGTGTGAAATAG

Upstream 100 bases:

>100_bases
TCGCTTCTCGCTTGAGCCGATCCGTATTATCCTTGCCGATTCATACGGAGATGACAGAAGAGGAGCAGGCTTATATTATA
GAATCTATAAAGAGTGTTTT

Downstream 100 bases:

>100_bases
CAGTGAGTAGATATGTGAAATCATTACAATAAGGTGATGATTTTGTGTGTCGCTATAATTATTTGATAATCAGAGCTCCA
AAAAGACGTGCATGTTTCTC

Product: putative dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MNKKIRFAVIGCGHIGKRHAEMITRDEGAELVALCDIRPKEELGIEAYVVPFARDIDELFRLGLDIDVVNICTPNGLHAE
MAIQAIESGHHVVIEKPMALTLADAEKVVYTSLRFRKQVFCVMQNRYSPPSVWIKEMVESGKLGQIYMVQLNCYWNRDER
YYKPGGWHGDAALDGGTLFTQFSHFIDIMYWLFGDICNIQTHFADFNHEKLTAFEDSGFVNFNFVNGGMGSLSYSTAVWD
KNLESSMLIVAENGSVKIGGQYMNEVEYCHIKDYEMPELAPTNPGNDYGPYKGSAQNHNFVIRNVVNVLSGAPGEIITTN
VLEGMKVVDIIRRIYAGKSVK

Sequences:

>Translated_341_residues
MNKKIRFAVIGCGHIGKRHAEMITRDEGAELVALCDIRPKEELGIEAYVVPFARDIDELFRLGLDIDVVNICTPNGLHAE
MAIQAIESGHHVVIEKPMALTLADAEKVVYTSLRFRKQVFCVMQNRYSPPSVWIKEMVESGKLGQIYMVQLNCYWNRDER
YYKPGGWHGDAALDGGTLFTQFSHFIDIMYWLFGDICNIQTHFADFNHEKLTAFEDSGFVNFNFVNGGMGSLSYSTAVWD
KNLESSMLIVAENGSVKIGGQYMNEVEYCHIKDYEMPELAPTNPGNDYGPYKGSAQNHNFVIRNVVNVLSGAPGEIITTN
VLEGMKVVDIIRRIYAGKSVK
>Mature_341_residues
MNKKIRFAVIGCGHIGKRHAEMITRDEGAELVALCDIRPKEELGIEAYVVPFARDIDELFRLGLDIDVVNICTPNGLHAE
MAIQAIESGHHVVIEKPMALTLADAEKVVYTSLRFRKQVFCVMQNRYSPPSVWIKEMVESGKLGQIYMVQLNCYWNRDER
YYKPGGWHGDAALDGGTLFTQFSHFIDIMYWLFGDICNIQTHFADFNHEKLTAFEDSGFVNFNFVNGGMGSLSYSTAVWD
KNLESSMLIVAENGSVKIGGQYMNEVEYCHIKDYEMPELAPTNPGNDYGPYKGSAQNHNFVIRNVVNVLSGAPGEIITTN
VLEGMKVVDIIRRIYAGKSVK

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=255, Percent_Identity=28.2352941176471, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789848, Length=183, Percent_Identity=27.3224043715847, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI87082405, Length=263, Percent_Identity=24.3346007604563, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI87081947, Length=213, Percent_Identity=24.4131455399061, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38368; Mature: 38368

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKIRFAVIGCGHIGKRHAEMITRDEGAELVALCDIRPKEELGIEAYVVPFARDIDELF
CCCEEEEEEEECCCCCHHHHHHHHCCCCCCEEEEECCCCHHHCCCEEEEECHHHCHHHHH
RLGLDIDVVNICTPNGLHAEMAIQAIESGHHVVIEKPMALTLADAEKVVYTSLRFRKQVF
HCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHH
CVMQNRYSPPSVWIKEMVESGKLGQIYMVQLNCYWNRDERYYKPGGWHGDAALDGGTLFT
HHHHCCCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCEECCCCCCCCCCCCCCHHHH
QFSHFIDIMYWLFGDICNIQTHFADFNHEKLTAFEDSGFVNFNFVNGGMGSLSYSTAVWD
HHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEECCCCEEEEEEECCCCCCCEEEHHHCC
KNLESSMLIVAENGSVKIGGQYMNEVEYCHIKDYEMPELAPTNPGNDYGPYKGSAQNHNF
CCCCCCEEEEEECCCEEECHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VIRNVVNVLSGAPGEIITTNVLEGMKVVDIIRRIYAGKSVK
HHHHHHHHHCCCCCCEEEHHHHCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNKKIRFAVIGCGHIGKRHAEMITRDEGAELVALCDIRPKEELGIEAYVVPFARDIDELF
CCCEEEEEEEECCCCCHHHHHHHHCCCCCCEEEEECCCCHHHCCCEEEEECHHHCHHHHH
RLGLDIDVVNICTPNGLHAEMAIQAIESGHHVVIEKPMALTLADAEKVVYTSLRFRKQVF
HCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHH
CVMQNRYSPPSVWIKEMVESGKLGQIYMVQLNCYWNRDERYYKPGGWHGDAALDGGTLFT
HHHHCCCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCEECCCCCCCCCCCCCCHHHH
QFSHFIDIMYWLFGDICNIQTHFADFNHEKLTAFEDSGFVNFNFVNGGMGSLSYSTAVWD
HHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEECCCCEEEEEEECCCCCCCEEEHHHCC
KNLESSMLIVAENGSVKIGGQYMNEVEYCHIKDYEMPELAPTNPGNDYGPYKGSAQNHNF
CCCCCCEEEEEECCCEEECHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VIRNVVNVLSGAPGEIITTNVLEGMKVVDIIRRIYAGKSVK
HHHHHHHHHCCCCCCEEEHHHHCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]