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The map label for this gene is tuaB [H]

Identifier: 150009380

GI number: 150009380

Start: 3325065

End: 3326510

Strand: Reverse

Name: tuaB [H]

Synonym: BDI_2788

Alternate gene names: 150009380

Gene position: 3326510-3325065 (Counterclockwise)

Preceding gene: 150009381

Following gene: 150009379

Centisome position: 69.14

GC content: 38.31

Gene sequence:

>1446_bases
ATGGCGGAACAATCATTAAAAGATAAGACAGCGAAAGGGCTCTTCTGGGGAGGGGTAAGTAATGGTGTGCAACAGCTGTT
GGGGATGTTGTTTGGTATTTATCTGGCACGTACACTTAATGCCGAGGATTATGGATTGGTAGGTATGTTGGCGATATTTA
GTGGAATTGCTAGTACGATTATTAATAGCGGATTTTCGGTAGCCTTGACTAACAAATTGGATGCTACTCATAAGGATTAT
AATGCGGTGTTTTGGTTTTCTTTTGTTGTAAGCATCTGTTTGTATATTGTTCTTTTTTTTTCAGCTCCGCTGATTGCGTC
ATTTTATGATCGTCAAGAACTGGTTAATTTATCTCGGGTAATATTTGCGAGTTTTTTGTTTTCTGGAATGGCGATTGTTC
CTCATGTTATCTTATTTAAGCAATTACAAGTCAAGATGCAGGCGAAGATTGATGTTTTTGCGTTGTTCTTGTCGGGTATG
TGCGGGGTTCTTTTGGCATTCAATGGTTTCGCTTATTGGGCATTGGCAATTCAAAGTACGGTGTATGTGGCAAGTGCATC
TTTGTTGAAATGGATGGTTGTATCTTGGCGTCCTAGTCTTGATTTTTCGATCGAACCTCTGAAAGAGATGTTCCCGTTTA
GTGTAAAGTTGTTCCTTACGAATATTTTCCAACAGGTCAATAATAATGTGTTTTCTGTTTTGTTAGGTAAATTATATAAC
GCTAATGTGTTAGGCTATTATTCGCAAGGAAATAAGTGGATGACTATGGGAGGTTCAATGTTGAACAATATGATCAATTC
GGTGGCGCAACCTGTATTCGTGCAAGTGAATGATGATTTGGAACGTCAGCGGAATGTATTCCGCAAGATGGTTCGTTTCG
CTGCGTTCGTGTCGTTTCCAGCTATGCTGGGATTGGCTTTTGTAGCTGAGGAGTTTATCTGTGCCACGATTGGCAATAAA
TGGTTGGAAAGTGTACCTATATTACAAATATTGTGCGTTCAAGGGGCGATAGGACCGATTATATTGCTATATACCCAAGT
TCTTGTCTCGCACGGGAAATCGGATATGTTTTTATATGCGAATGTGTTCCATGGTATATTACAATTGGCTATATTATGGC
TTACTGCATCTTTTGGTATTCTTTGTATGGTTGTTGCATATGTGCTTACTTATGTATTTATGTTATTTGTGTGGCATCTT
TTGGTTTATCGATTGATTCGTGTCCGTTTGGTACAATTGGCGCAAGATGTGTTACCTTATTTGGTGGTTACTTTGTTCGT
CTTCTTTGTGGTATATGTCTTAACGATTAAGATTGAGAATCTATATATATTGTTACTATTGAAAATTAGTTTGTCAATTC
TTTTTTATGCGTTCGCTTTATGGCGGTTGCGTTCTGTCGTATTCTTGGAAGGCGTGAATTTACTCCTTAATAAATGTCGG
AAATGA

Upstream 100 bases:

>100_bases
AAGATCGTAAATATACATAAAGCAGAGAAAAGCTTCCCATTTTTCACTGTTAGCCAAAGGTAAATGTTTATCTTTGTTGC
ACTTTTACCATAAATGTCAA

Downstream 100 bases:

>100_bases
AAGAGGTAAAGATAGGAAAGGATAAAATAAGTGTCGCATTATGTACTTATAATGGAGAGAAATTCATTCGTGAGCAGTTG
CGGAGTATCGTTGGACAGAC

Product: putative lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MAEQSLKDKTAKGLFWGGVSNGVQQLLGMLFGIYLARTLNAEDYGLVGMLAIFSGIASTIINSGFSVALTNKLDATHKDY
NAVFWFSFVVSICLYIVLFFSAPLIASFYDRQELVNLSRVIFASFLFSGMAIVPHVILFKQLQVKMQAKIDVFALFLSGM
CGVLLAFNGFAYWALAIQSTVYVASASLLKWMVVSWRPSLDFSIEPLKEMFPFSVKLFLTNIFQQVNNNVFSVLLGKLYN
ANVLGYYSQGNKWMTMGGSMLNNMINSVAQPVFVQVNDDLERQRNVFRKMVRFAAFVSFPAMLGLAFVAEEFICATIGNK
WLESVPILQILCVQGAIGPIILLYTQVLVSHGKSDMFLYANVFHGILQLAILWLTASFGILCMVVAYVLTYVFMLFVWHL
LVYRLIRVRLVQLAQDVLPYLVVTLFVFFVVYVLTIKIENLYILLLLKISLSILFYAFALWRLRSVVFLEGVNLLLNKCR
K

Sequences:

>Translated_481_residues
MAEQSLKDKTAKGLFWGGVSNGVQQLLGMLFGIYLARTLNAEDYGLVGMLAIFSGIASTIINSGFSVALTNKLDATHKDY
NAVFWFSFVVSICLYIVLFFSAPLIASFYDRQELVNLSRVIFASFLFSGMAIVPHVILFKQLQVKMQAKIDVFALFLSGM
CGVLLAFNGFAYWALAIQSTVYVASASLLKWMVVSWRPSLDFSIEPLKEMFPFSVKLFLTNIFQQVNNNVFSVLLGKLYN
ANVLGYYSQGNKWMTMGGSMLNNMINSVAQPVFVQVNDDLERQRNVFRKMVRFAAFVSFPAMLGLAFVAEEFICATIGNK
WLESVPILQILCVQGAIGPIILLYTQVLVSHGKSDMFLYANVFHGILQLAILWLTASFGILCMVVAYVLTYVFMLFVWHL
LVYRLIRVRLVQLAQDVLPYLVVTLFVFFVVYVLTIKIENLYILLLLKISLSILFYAFALWRLRSVVFLEGVNLLLNKCR
K
>Mature_480_residues
AEQSLKDKTAKGLFWGGVSNGVQQLLGMLFGIYLARTLNAEDYGLVGMLAIFSGIASTIINSGFSVALTNKLDATHKDYN
AVFWFSFVVSICLYIVLFFSAPLIASFYDRQELVNLSRVIFASFLFSGMAIVPHVILFKQLQVKMQAKIDVFALFLSGMC
GVLLAFNGFAYWALAIQSTVYVASASLLKWMVVSWRPSLDFSIEPLKEMFPFSVKLFLTNIFQQVNNNVFSVLLGKLYNA
NVLGYYSQGNKWMTMGGSMLNNMINSVAQPVFVQVNDDLERQRNVFRKMVRFAAFVSFPAMLGLAFVAEEFICATIGNKW
LESVPILQILCVQGAIGPIILLYTQVLVSHGKSDMFLYANVFHGILQLAILWLTASFGILCMVVAYVLTYVFMLFVWHLL
VYRLIRVRLVQLAQDVLPYLVVTLFVFFVVYVLTIKIENLYILLLLKISLSILFYAFALWRLRSVVFLEGVNLLLNKCRK

Specific function: Might be involved in the translocation of teichuronic acid repeating units from the inner to the outer surface of the membrane [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788359, Length=371, Percent_Identity=23.7196765498652, Blast_Score=125, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 54313; Mature: 54181

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure 
AEQSLKDKTAKGLFWGGVSNGVQQLLGMLFGIYLARTLNAEDYGLVGMLAIFSGIASTI
CCCHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
INSGFSVALTNKLDATHKDYNAVFWFSFVVSICLYIVLFFSAPLIASFYDRQELVNLSRV
HCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFASFLFSGMAIVPHVILFKQLQVKMQAKIDVFALFLSGMCGVLLAFNGFAYWALAIQST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYVASASLLKWMVVSWRPSLDFSIEPLKEMFPFSVKLFLTNIFQQVNNNVFSVLLGKLYN
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHC
ANVLGYYSQGNKWMTMGGSMLNNMINSVAQPVFVQVNDDLERQRNVFRKMVRFAAFVSFP
CCEEEEEECCCEEEEECHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
AMLGLAFVAEEFICATIGNKWLESVPILQILCVQGAIGPIILLYTQVLVSHGKSDMFLYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHH
NVFHGILQLAILWLTASFGILCMVVAYVLTYVFMLFVWHLLVYRLIRVRLVQLAQDVLPY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVVTLFVFFVVYVLTIKIENLYILLLLKISLSILFYAFALWRLRSVVFLEGVNLLLNKCR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10048024; 9384377 [H]