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The map label for this gene is asnC [H]

Identifier: 150009302

GI number: 150009302

Start: 3212035

End: 3212502

Strand: Reverse

Name: asnC [H]

Synonym: BDI_2704

Alternate gene names: 150009302

Gene position: 3212502-3212035 (Counterclockwise)

Preceding gene: 150009303

Following gene: 150009301

Centisome position: 66.77

GC content: 41.88

Gene sequence:

>468_bases
ATGGAGAAGATAGACAAACTGGACCGGCAGATATTGAACATTATTTCAAAGAATGCTAGGATTCCTTTTAAAGATGTTGC
CGAGGAGTGCGGTGTATCTCGTGCAGCTATTCATCAACGGGTTCAACGCATGATTGATATGAATGTGATCGTTGGCTCAG
GGTATCACATCAATCCTAAAATATTGGGGTATAATACATGTACCTATATCGGCGTGAAATTGGAGCGTGGATCTATGTAC
AAGGATGTTGTCCCGGAATTCGAGAAAATACCCGAAGTGGTAGAATGCCATTTCACTACGGGTCCGTATACGATGCTGAT
CAAGCTGTATGCCCGTGATAACGAGCACTTGATGGAACTTTTGAACTCTAAGATTCAGGAGATACCGGGTGTTACGGCTA
CAGAGACCTTGATTTCTTTACGCCAAAGTGTTAAACGTGAGATCCCTATTTGTAATATCAATGAATAA

Upstream 100 bases:

>100_bases
TTTATTGATTACTTTTTTCTTTCAGAATGATATATGATTCAAATTTATTATATACTTTTGATACATTAAATCTGAATGCA
TATAATAAAGCGAATTTAAA

Downstream 100 bases:

>100_bases
GACGAAGAATTATACATGAGCCCGGCCTATTCCAGTGCCGGGCTTTTTTGTTTATTCGGCGGTATCATCTATCTTTGTAA
TTCGTAATTGTGTGAGGTTC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MEKIDKLDRQILNIISKNARIPFKDVAEECGVSRAAIHQRVQRMIDMNVIVGSGYHINPKILGYNTCTYIGVKLERGSMY
KDVVPEFEKIPEVVECHFTTGPYTMLIKLYARDNEHLMELLNSKIQEIPGVTATETLISLRQSVKREIPICNINE

Sequences:

>Translated_155_residues
MEKIDKLDRQILNIISKNARIPFKDVAEECGVSRAAIHQRVQRMIDMNVIVGSGYHINPKILGYNTCTYIGVKLERGSMY
KDVVPEFEKIPEVVECHFTTGPYTMLIKLYARDNEHLMELLNSKIQEIPGVTATETLISLRQSVKREIPICNINE
>Mature_155_residues
MEKIDKLDRQILNIISKNARIPFKDVAEECGVSRAAIHQRVQRMIDMNVIVGSGYHINPKILGYNTCTYIGVKLERGSMY
KDVVPEFEKIPEVVECHFTTGPYTMLIKLYARDNEHLMELLNSKIQEIPGVTATETLISLRQSVKREIPICNINE

Specific function: Activator of asnA transcription [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790182, Length=145, Percent_Identity=37.9310344827586, Blast_Score=106, Evalue=5e-25,
Organism=Escherichia coli, GI1787116, Length=143, Percent_Identity=28.6713286713287, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17734; Mature: 17734

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIDKLDRQILNIISKNARIPFKDVAEECGVSRAAIHQRVQRMIDMNVIVGSGYHINPK
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCCEEECCE
ILGYNTCTYIGVKLERGSMYKDVVPEFEKIPEVVECHFTTGPYTMLIKLYARDNEHLMEL
EECCCCEEEEEEEECCCCCHHHHHHHHHHCHHHHEEECCCCCHHHHHHHHHCCCHHHHHH
LNSKIQEIPGVTATETLISLRQSVKREIPICNINE
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEKIDKLDRQILNIISKNARIPFKDVAEECGVSRAAIHQRVQRMIDMNVIVGSGYHINPK
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCCEEECCE
ILGYNTCTYIGVKLERGSMYKDVVPEFEKIPEVVECHFTTGPYTMLIKLYARDNEHLMEL
EECCCCEEEEEEEECCCCCHHHHHHHHHHCHHHHEEECCCCCHHHHHHHHHCCCHHHHHH
LNSKIQEIPGVTATETLISLRQSVKREIPICNINE
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]