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The map label for this gene is yebA [C]

Identifier: 150009296

GI number: 150009296

Start: 3204721

End: 3205971

Strand: Reverse

Name: yebA [C]

Synonym: BDI_2698

Alternate gene names: 150009296

Gene position: 3205971-3204721 (Counterclockwise)

Preceding gene: 150009297

Following gene: 150009295

Centisome position: 66.63

GC content: 43.88

Gene sequence:

>1251_bases
ATGAGTATAAGGACATTTCTATTCATTTGTTGTGCCGCTGTGATGGTATCGACTGCTAATGCGGAGAACCCGGTGAAACC
GGAAACTCCGGAGACTCCCAATCATCCAACCCACAAACTTATGGACAAGCGTGTATCTGAGTTAATGGCTGACCGTGTTG
GCTTTAAGAAAGATATGGCTTTGAAGGAGCTTGCGGAGATTAATGAAAAAGCGGAGTTGGAGGCGAGAGAGAACTTGATG
TTCCCTGCCGATGAATTATATGGCGAATGGACAAATGAATGGGTGAATCCTTTCCGGGGTAAAAAGGTAGATATGCCGGA
TTCTTGCGTAATCGATTGTTCTACTTTTGTCTTGCCTATGGACTCTATGACAAGGGTCACTTCAAAGTATGGTCCTCGCC
GTAGACGGATGCATAAGGGGATAGACTTGAAAGTGCAAATTGGAGATACGATCCGTGCGGCGTTTGACGGCAAGGTGCGT
ATCAAGAATTTCGAGCGTAGGGGATATGGCTATTATCTTGTGATTCGCCATCCGAATGGTTTAGAGACTGTATATGGTCA
TTTATCTAAATTCTTAGTAGGTGTGAACGATATCGTACGGGCTGGAGATCCGATCGCTTTAGGGGGAAATACAGGACGCT
CTACGGGATCTCATTTGCATTTTGAGACTCGTTTTCTTGGACAGGCTATTAACCCGGCTGATATTATTGACTTCGAGAAC
TCAATACCTCATCAGGATCAATATGTGTTTCGTAACGTCAAGATTAACGGACGTAAGAGCAATATCTATACATCTTCCAA
TAGTCAGATGGTGTACCATCGTGTAAAATCCGGTGATACCTTAGGTAAAATCGCACGTATATATGGTACGACAGTGAATG
AGCTTTGTCGTTTAAATGGATTGAAATCTACTTCTATGTTACGTATCGGCCAGTCCATTCGTTGTAGTGCCGGTGTGGAA
ACCGCGGCTAAAGCGACTCCAAAAGCTCAAACTCAAAAGAAATCGACTGCTTCCGCATCTTCTAAGAAAATCACGGTACA
GGCAAGTTCTTCCGCTACCGCTTCTTTAGGAGAAGACACGAATACAATGAATGATGTGGAGGCTACTTCGGTTTATCATC
GTATTAAATCCGGTGATACGCTTGGCGCTATCGCTAAAAGATACGGTACTTCTGTTAGTAAACTCTGCGAATTGAACGGT
ATCACAAAGACTACCGTGTTGCGTTTAGGACGCTCATTACGCTGTTCATAA

Upstream 100 bases:

>100_bases
GGCTTATTCAAATTTCCGAACTTTGACAAGTTGACAATCAGGCAGAGATGTCGGGTATTGCCGTTTTATCCTGAATTATA
AGAATGAAAGTTATCAAAAA

Downstream 100 bases:

>100_bases
CGATATATAAGATGTAAGGAAACGAAAAGGAGCCGCTTATAAAGTGGCTCCTTTTTGTTGTAACCTCTTTTCATTTATCT
TATTAGCTTTTGTTGTCTTG

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MSIRTFLFICCAAVMVSTANAENPVKPETPETPNHPTHKLMDKRVSELMADRVGFKKDMALKELAEINEKAELEARENLM
FPADELYGEWTNEWVNPFRGKKVDMPDSCVIDCSTFVLPMDSMTRVTSKYGPRRRRMHKGIDLKVQIGDTIRAAFDGKVR
IKNFERRGYGYYLVIRHPNGLETVYGHLSKFLVGVNDIVRAGDPIALGGNTGRSTGSHLHFETRFLGQAINPADIIDFEN
SIPHQDQYVFRNVKINGRKSNIYTSSNSQMVYHRVKSGDTLGKIARIYGTTVNELCRLNGLKSTSMLRIGQSIRCSAGVE
TAAKATPKAQTQKKSTASASSKKITVQASSSATASLGEDTNTMNDVEATSVYHRIKSGDTLGAIAKRYGTSVSKLCELNG
ITKTTVLRLGRSLRCS

Sequences:

>Translated_416_residues
MSIRTFLFICCAAVMVSTANAENPVKPETPETPNHPTHKLMDKRVSELMADRVGFKKDMALKELAEINEKAELEARENLM
FPADELYGEWTNEWVNPFRGKKVDMPDSCVIDCSTFVLPMDSMTRVTSKYGPRRRRMHKGIDLKVQIGDTIRAAFDGKVR
IKNFERRGYGYYLVIRHPNGLETVYGHLSKFLVGVNDIVRAGDPIALGGNTGRSTGSHLHFETRFLGQAINPADIIDFEN
SIPHQDQYVFRNVKINGRKSNIYTSSNSQMVYHRVKSGDTLGKIARIYGTTVNELCRLNGLKSTSMLRIGQSIRCSAGVE
TAAKATPKAQTQKKSTASASSKKITVQASSSATASLGEDTNTMNDVEATSVYHRIKSGDTLGAIAKRYGTSVSKLCELNG
ITKTTVLRLGRSLRCS
>Mature_415_residues
SIRTFLFICCAAVMVSTANAENPVKPETPETPNHPTHKLMDKRVSELMADRVGFKKDMALKELAEINEKAELEARENLMF
PADELYGEWTNEWVNPFRGKKVDMPDSCVIDCSTFVLPMDSMTRVTSKYGPRRRRMHKGIDLKVQIGDTIRAAFDGKVRI
KNFERRGYGYYLVIRHPNGLETVYGHLSKFLVGVNDIVRAGDPIALGGNTGRSTGSHLHFETRFLGQAINPADIIDFENS
IPHQDQYVFRNVKINGRKSNIYTSSNSQMVYHRVKSGDTLGKIARIYGTTVNELCRLNGLKSTSMLRIGQSIRCSAGVET
AAKATPKAQTQKKSTASASSKKITVQASSSATASLGEDTNTMNDVEATSVYHRIKSGDTLGAIAKRYGTSVSKLCELNGI
TKTTVLRLGRSLRCS

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=123, Percent_Identity=40.650406504065, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI87082297, Length=94, Percent_Identity=39.3617021276596, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1789099, Length=95, Percent_Identity=38.9473684210526, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 46042; Mature: 45911

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRTFLFICCAAVMVSTANAENPVKPETPETPNHPTHKLMDKRVSELMADRVGFKKDMA
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
LKELAEINEKAELEARENLMFPADELYGEWTNEWVNPFRGKKVDMPDSCVIDCSTFVLPM
HHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHEEECC
DSMTRVTSKYGPRRRRMHKGIDLKVQIGDTIRAAFDGKVRIKNFERRGYGYYLVIRHPNG
HHHHHHHHHCCHHHHHHHCCCCEEEEECCCEEECCCCEEEEEEEECCCCEEEEEEECCCC
LETVYGHLSKFLVGVNDIVRAGDPIALGGNTGRSTGSHLHFETRFLGQAINPADIIDFEN
HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEHHHHCCCCCCHHEECCCC
SIPHQDQYVFRNVKINGRKSNIYTSSNSQMVYHRVKSGDTLGKIARIYGTTVNELCRLNG
CCCCCCCEEEEEEEECCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHCC
LKSTSMLRIGQSIRCSAGVETAAKATPKAQTQKKSTASASSKKITVQASSSATASLGEDT
CCCHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC
NTMNDVEATSVYHRIKSGDTLGAIAKRYGTSVSKLCELNGITKTTVLRLGRSLRCS
CCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCHHCCCC
>Mature Secondary Structure 
SIRTFLFICCAAVMVSTANAENPVKPETPETPNHPTHKLMDKRVSELMADRVGFKKDMA
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
LKELAEINEKAELEARENLMFPADELYGEWTNEWVNPFRGKKVDMPDSCVIDCSTFVLPM
HHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECHHEEECC
DSMTRVTSKYGPRRRRMHKGIDLKVQIGDTIRAAFDGKVRIKNFERRGYGYYLVIRHPNG
HHHHHHHHHCCHHHHHHHCCCCEEEEECCCEEECCCCEEEEEEEECCCCEEEEEEECCCC
LETVYGHLSKFLVGVNDIVRAGDPIALGGNTGRSTGSHLHFETRFLGQAINPADIIDFEN
HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEHHHHCCCCCCHHEECCCC
SIPHQDQYVFRNVKINGRKSNIYTSSNSQMVYHRVKSGDTLGKIARIYGTTVNELCRLNG
CCCCCCCEEEEEEEECCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHCC
LKSTSMLRIGQSIRCSAGVETAAKATPKAQTQKKSTASASSKKITVQASSSATASLGEDT
CCCHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC
NTMNDVEATSVYHRIKSGDTLGAIAKRYGTSVSKLCELNGITKTTVLRLGRSLRCS
CCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]