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The map label for this gene is yohK [H]

Identifier: 150009185

GI number: 150009185

Start: 3064846

End: 3065550

Strand: Direct

Name: yohK [H]

Synonym: BDI_2587

Alternate gene names: 150009185

Gene position: 3064846-3065550 (Clockwise)

Preceding gene: 150009184

Following gene: 150009186

Centisome position: 63.7

GC content: 48.51

Gene sequence:

>705_bases
ATGGATAATCTGGCGCATTCCGAGATTTTCGCTCTTACCTTGGTAATTGGTACCTACCTGACTTCCTTGGCTCTTTACAA
GAAAGTCCATATCAGTCTTTTGCATCCTTTGCTTACGACCATCTTCGTGATTATCGTGGTACTGGAAGTCCTAGGCATTC
AATATGAGTCGTTCCAGCAAAGCAGTCATTTGATCCATTTTATGCTGGGGCCTTCCGTAGTGGCCCTTGGCTATGTGTTA
TATGAGCAAATCCAATATCTAAAGGGAAATGTCGTTTCGATCTTGACTTCCGTATTTGTCGGGGCCATTGTCGGAATCGT
AAGCGTAATCATCATCGGTAAATTGATGGGAGCCGACCAAGCGTTGATCGCCACGCTCCAACCGAAATCCGTCACCACCC
CGATCGCTATGGGGATAGCGGAGAAAGCGGGCGGCATACCTTCACTTACCGCCGTCATCGTCGTAGCGGTAGGAATCTTT
GGCAGTATAGTGGGCCCTATCGTGATGAGGGTACTGGGAATAGATAGCCATATCGCTAAAGGACTGGCGTTAGGGGCTTC
CTCCCATGGAGTAGGAACAGCAGCGGCCATTCAAATCGGGGCCATCGAAGGAGCATTAAGCGGACTGGCGATTGGCTTGA
TGGGTATCATGACAGCGGTCTTGGTTCCGGTTATTCGGTTGATTTGCAACTATTTTTCCATATAA

Upstream 100 bases:

>100_bases
GTATTGGGCAGTCCTGCTGATCGCTTCCGTAGTAAGTACAATTTTAGTCATCGCCAGCGTAGCGTTGGTGCAACAAAAAC
TGGAAAAGGGGAAATAGACC

Downstream 100 bases:

>100_bases
ATACGCAAAACTTTTTGCTACTTTAGCAGGAATGTACTACTTTTGCCCCCGAAAATCGTTAAGGATTACTCTATAACATT
ATAAATAAAGAAAATAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MDNLAHSEIFALTLVIGTYLTSLALYKKVHISLLHPLLTTIFVIIVVLEVLGIQYESFQQSSHLIHFMLGPSVVALGYVL
YEQIQYLKGNVVSILTSVFVGAIVGIVSVIIIGKLMGADQALIATLQPKSVTTPIAMGIAEKAGGIPSLTAVIVVAVGIF
GSIVGPIVMRVLGIDSHIAKGLALGASSHGVGTAAAIQIGAIEGALSGLAIGLMGIMTAVLVPVIRLICNYFSI

Sequences:

>Translated_234_residues
MDNLAHSEIFALTLVIGTYLTSLALYKKVHISLLHPLLTTIFVIIVVLEVLGIQYESFQQSSHLIHFMLGPSVVALGYVL
YEQIQYLKGNVVSILTSVFVGAIVGIVSVIIIGKLMGADQALIATLQPKSVTTPIAMGIAEKAGGIPSLTAVIVVAVGIF
GSIVGPIVMRVLGIDSHIAKGLALGASSHGVGTAAAIQIGAIEGALSGLAIGLMGIMTAVLVPVIRLICNYFSI
>Mature_234_residues
MDNLAHSEIFALTLVIGTYLTSLALYKKVHISLLHPLLTTIFVIIVVLEVLGIQYESFQQSSHLIHFMLGPSVVALGYVL
YEQIQYLKGNVVSILTSVFVGAIVGIVSVIIIGKLMGADQALIATLQPKSVTTPIAMGIAEKAGGIPSLTAVIVVAVGIF
GSIVGPIVMRVLGIDSHIAKGLALGASSHGVGTAAAIQIGAIEGALSGLAIGLMGIMTAVLVPVIRLICNYFSI

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=225, Percent_Identity=39.1111111111111, Blast_Score=156, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24296; Mature: 24296

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLAHSEIFALTLVIGTYLTSLALYKKVHISLLHPLLTTIFVIIVVLEVLGIQYESFQQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SSHLIHFMLGPSVVALGYVLYEQIQYLKGNVVSILTSVFVGAIVGIVSVIIIGKLMGADQ
HHHEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ALIATLQPKSVTTPIAMGIAEKAGGIPSLTAVIVVAVGIFGSIVGPIVMRVLGIDSHIAK
HHHEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
GLALGASSHGVGTAAAIQIGAIEGALSGLAIGLMGIMTAVLVPVIRLICNYFSI
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNLAHSEIFALTLVIGTYLTSLALYKKVHISLLHPLLTTIFVIIVVLEVLGIQYESFQQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SSHLIHFMLGPSVVALGYVLYEQIQYLKGNVVSILTSVFVGAIVGIVSVIIIGKLMGADQ
HHHEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ALIATLQPKSVTTPIAMGIAEKAGGIPSLTAVIVVAVGIFGSIVGPIVMRVLGIDSHIAK
HHHEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
GLALGASSHGVGTAAAIQIGAIEGALSGLAIGLMGIMTAVLVPVIRLICNYFSI
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]