| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009173
Identifier: 150009173
GI number: 150009173
Start: 3047818
End: 3049020
Strand: Reverse
Name: 150009173
Synonym: BDI_2575
Alternate gene names: NA
Gene position: 3049020-3047818 (Counterclockwise)
Preceding gene: 150009174
Following gene: 150009172
Centisome position: 63.37
GC content: 45.05
Gene sequence:
>1203_bases ATGGTAAGAGTTTCAAGATTCAGTCTGTTACTAGCGGTTTTCAGCTTTTTGACGGCATTTACGGCTTTATATGCCCAAGG AGGCGCAGACGATGTTAAACATAAATTCGCCCCGATTAATACGGCGATACCGTCTTTGTCTATTGCGCCCGATGCTCGCG GAGGTGCTATGGGTGATAACGGTGTGGCTACTACGCCGGATGTGAATTCCCAATACTGGAACCCGGCTAAGTATGCTTTT AGCTATAGTAAGGCCGGAGTCGCTTTATCCTATACGCCTTGGTTACGTAAATTGGTGAATGATGTGGCTTTAGCATATCT GGCCGGTTATTATAAATTAGGCGATAGCGATATGCAGGCGATCGGAGCTTCCTTGCGTTATTTCTCTTTAGGAGAAGTAC AGGAAAGCCGGGATGGAGGAATGGGTAATCAGCTCATATTGAATCCTTATGAGATGGCTTTTGATGTAAGTTATAGCCGT AAATTATCGGATGTGTTCTCTATGGCGGTCGCCTTGCGCTATATTCGTTCGGACATGGGTGCCTCGTCGGATGCGGATAT GGTTCCGGATAACGCTTTTGCCGCTGATATCGCCGGTTATCTGGAGAAATACGTGATCTTAGGGAATAGCGAGTGCCTGT GGAGCTTTGGTTTTAATGTCTCCAATATCGGTACGAAGGTCTCTTACGACGGTGGAAATACCAACCAATTCTTGCCTACG ATGTTAAAGGTTGGAACTGGTTTACTGTATCCGATCGATGATTATAACCAAATCGGTATCTATGTGGATTTGAGTAAATA TTTAGTTCCTACCGAACCTATTCAAGAAGGTACGACTCCCGAGGATGAGGCTGCTTATAAGGAAAAACATGATGAATATA ACAATATGTCCCCGATCACGGGTATCTTCAAATCATTCGGTGACTCGCCGAATGGCTTCAAGGGCGAGCTAGAGGAGATT ATGGCCTCTATCGGTCTGGAGTATAATTACAATCAGCAGTTCTTTGTTCGTGGCGGTTATTACTATGAGAATAAATATCA GGGAAACCGTCAGTACTTCTCAGTCGGTGCTGGTTTCCGCATGAGTGTTTTCCAGTTGGATGCCGCTTATCTGATCAGTA CGGTACAGAGTAACCCGTTGGACCAGACATTGCGCTTCTCCTTGTCGTTCGATATGGATGGAATCAAGAACCTTTTCAGA TAA
Upstream 100 bases:
>100_bases GCACAATAAAGTATCGGGTAATTAGTTTATAATAAGCATGGGGGTATGTTTATTACCCTCTAGGAATGATAAATGTAAAT GTATTTTTAGAATAGAATAT
Downstream 100 bases:
>100_bases ATGGATATGAAGATACGTGTAGGTTTTGGCTATGATGTCCACGCCTTGGTGCCGGACCGGGAATTATGGCTAGGCGGGAT TAAGATCGAGCATACGTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MVRVSRFSLLLAVFSFLTAFTALYAQGGADDVKHKFAPINTAIPSLSIAPDARGGAMGDNGVATTPDVNSQYWNPAKYAF SYSKAGVALSYTPWLRKLVNDVALAYLAGYYKLGDSDMQAIGASLRYFSLGEVQESRDGGMGNQLILNPYEMAFDVSYSR KLSDVFSMAVALRYIRSDMGASSDADMVPDNAFAADIAGYLEKYVILGNSECLWSFGFNVSNIGTKVSYDGGNTNQFLPT MLKVGTGLLYPIDDYNQIGIYVDLSKYLVPTEPIQEGTTPEDEAAYKEKHDEYNNMSPITGIFKSFGDSPNGFKGELEEI MASIGLEYNYNQQFFVRGGYYYENKYQGNRQYFSVGAGFRMSVFQLDAAYLISTVQSNPLDQTLRFSLSFDMDGIKNLFR
Sequences:
>Translated_400_residues MVRVSRFSLLLAVFSFLTAFTALYAQGGADDVKHKFAPINTAIPSLSIAPDARGGAMGDNGVATTPDVNSQYWNPAKYAF SYSKAGVALSYTPWLRKLVNDVALAYLAGYYKLGDSDMQAIGASLRYFSLGEVQESRDGGMGNQLILNPYEMAFDVSYSR KLSDVFSMAVALRYIRSDMGASSDADMVPDNAFAADIAGYLEKYVILGNSECLWSFGFNVSNIGTKVSYDGGNTNQFLPT MLKVGTGLLYPIDDYNQIGIYVDLSKYLVPTEPIQEGTTPEDEAAYKEKHDEYNNMSPITGIFKSFGDSPNGFKGELEEI MASIGLEYNYNQQFFVRGGYYYENKYQGNRQYFSVGAGFRMSVFQLDAAYLISTVQSNPLDQTLRFSLSFDMDGIKNLFR >Mature_400_residues MVRVSRFSLLLAVFSFLTAFTALYAQGGADDVKHKFAPINTAIPSLSIAPDARGGAMGDNGVATTPDVNSQYWNPAKYAF SYSKAGVALSYTPWLRKLVNDVALAYLAGYYKLGDSDMQAIGASLRYFSLGEVQESRDGGMGNQLILNPYEMAFDVSYSR KLSDVFSMAVALRYIRSDMGASSDADMVPDNAFAADIAGYLEKYVILGNSECLWSFGFNVSNIGTKVSYDGGNTNQFLPT MLKVGTGLLYPIDDYNQIGIYVDLSKYLVPTEPIQEGTTPEDEAAYKEKHDEYNNMSPITGIFKSFGDSPNGFKGELEEI MASIGLEYNYNQQFFVRGGYYYENKYQGNRQYFSVGAGFRMSVFQLDAAYLISTVQSNPLDQTLRFSLSFDMDGIKNLFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44260; Mature: 44260
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRVSRFSLLLAVFSFLTAFTALYAQGGADDVKHKFAPINTAIPSLSIAPDARGGAMGDN CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHCCCCCEECCCCCCCCCCCC GVATTPDVNSQYWNPAKYAFSYSKAGVALSYTPWLRKLVNDVALAYLAGYYKLGDSDMQA CCCCCCCCCCCCCCCHHHEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHH IGASLRYFSLGEVQESRDGGMGNQLILNPYEMAFDVSYSRKLSDVFSMAVALRYIRSDMG HHHHHHEEECCCHHHHCCCCCCCEEEECHHHHEEECHHHHHHHHHHHHHHHHHHHHHHCC ASSDADMVPDNAFAADIAGYLEKYVILGNSECLWSFGFNVSNIGTKVSYDGGNTNQFLPT CCCCCCCCCCCHHHHHHHHHHHHEEEECCCCEEEEECCCHHHCCCEEEECCCCCCHHHHH MLKVGTGLLYPIDDYNQIGIYVDLSKYLVPTEPIQEGTTPEDEAAYKEKHDEYNNMSPIT HHHHCCCCEEECCCCCEEEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHH GIFKSFGDSPNGFKGELEEIMASIGLEYNYNQQFFVRGGYYYENKYQGNRQYFSVGAGFR HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCCCCCEEEEECCCCE MSVFQLDAAYLISTVQSNPLDQTLRFSLSFDMDGIKNLFR EHHHHHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHHHCC >Mature Secondary Structure MVRVSRFSLLLAVFSFLTAFTALYAQGGADDVKHKFAPINTAIPSLSIAPDARGGAMGDN CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHCCCCCEECCCCCCCCCCCC GVATTPDVNSQYWNPAKYAFSYSKAGVALSYTPWLRKLVNDVALAYLAGYYKLGDSDMQA CCCCCCCCCCCCCCCHHHEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHH IGASLRYFSLGEVQESRDGGMGNQLILNPYEMAFDVSYSRKLSDVFSMAVALRYIRSDMG HHHHHHEEECCCHHHHCCCCCCCEEEECHHHHEEECHHHHHHHHHHHHHHHHHHHHHHCC ASSDADMVPDNAFAADIAGYLEKYVILGNSECLWSFGFNVSNIGTKVSYDGGNTNQFLPT CCCCCCCCCCCHHHHHHHHHHHHEEEECCCCEEEEECCCHHHCCCEEEECCCCCCHHHHH MLKVGTGLLYPIDDYNQIGIYVDLSKYLVPTEPIQEGTTPEDEAAYKEKHDEYNNMSPIT HHHHCCCCEEECCCCCEEEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHH GIFKSFGDSPNGFKGELEEIMASIGLEYNYNQQFFVRGGYYYENKYQGNRQYFSVGAGFR HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCCCCCEEEEECCCCE MSVFQLDAAYLISTVQSNPLDQTLRFSLSFDMDGIKNLFR EHHHHHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA