| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is cls [H]
Identifier: 150009099
GI number: 150009099
Start: 2948857
End: 2950293
Strand: Direct
Name: cls [H]
Synonym: BDI_2500
Alternate gene names: 150009099
Gene position: 2948857-2950293 (Clockwise)
Preceding gene: 150009095
Following gene: 150009103
Centisome position: 61.29
GC content: 44.26
Gene sequence:
>1437_bases ATGTTAGCAGCCATTCATATACAGTTAATCGTTGGTACGATATTTATCATATTGTATAGCGTCACTATATTAGGACTGGT ATTAGTTATCATTACAGAGAATAGGAATCCGTTAAAGACAATTCCTTGGGTAATCGTCTTATTATTAGCACCCGGTATCG GACTGCTTTTCTATTTCTTCTTTGGACAAGATAACCGGAAACAACGGATCATATCGAGGCGTACCTATAAACGCATCATG AAAAGGCCGCAAGAGGGTAAATTACCTCAAGACGCCTGCGTAGTTCCGGACCCCTATAAACCTTTATCGACCTTGTTGAC TAACACCAACCAATCCTCCCTCCTATACGGAACACAAATCACGATTTATACGAATGGTACCGATAAGTTCAAAGACTTGC TGGAAGAGATCCAGAAAGCGACTCACCATATCCATATACAATATTATATATTCTGTGATGACGAGATAGGAAAACAGGTG CAACAACTCCTTATCAAGAAAGTAAAAGAAGGCGTGAAGGTACGTGTACTTTATGATGATGTGGGTTGCTGGAATGTAAA AGACGGCTTCTTTAAGGAAATGAAGGAAGCGGGTATCGAGGTATATGCGTTCTTGAGGGTAGCGTTCCCCGTTTTCACCA GTAAGGTGAATTACCGGAACCACCGCAAGATTATCGTGATAGACGGTAAAGTCGGGTTTATGGGAGGCATGAATATAGCC GACCGATACGATAAGGGAACCTCTTGGGGCACATGGAGGGATACGCATTTCAAATTCGTAGGGAAAGGAGTACACGGGCT TCAATCCGTATTCCTCATCGATTGGTACGTGGTTAGTAAAAAACTCTTGAACGATCGGATTTACTATCCGGCTGCCCAAA TCTATAGCGATAATATTATGCAAATCGCCACTAGCGGTCCGGTAGGTCAATGGAGAACTTTGTTGCAAGCGACCATTTTC ATGATCGCCAACGCCAAGAAGTATATCTTTATACAAACCCCTTATTTCCTGCCTACCGAAGGATTAAACCAAGCGTTGCA AACCGCCGCCTTAGGGGGAGTGGATGTTCGTTTGATGCTGCCTAAGCGTTCCGATACACGTTCAGCGAATATGGCCAGTC ATTCCTTTATTGACGAGATGGTAAAGGCCGGCGTAAAAGTATACCTCTACAAACCGGGCTTCTTGCATTCCAAGCTAGTC GTGTCCGACGACGCATTGACAAGCATCGGGTCCGCCAATATGGACTTCCGTAGCTTTGAGCATAACTTCGAGATTAACGC TTTCGTATATCAAAAGGAATTCGCCCTGCAAATGAAACGCATCTTTACACACGACATGCATCACTGTGAGCGTTTGATCC CTTCCCGCTGGTTAAAGCGCCCCCTCAAGCAACGCATGGCGGAATCATTTATGCGTCTGTTTTCTCCCCTTCTTTAA
Upstream 100 bases:
>100_bases GCCCTTCTATACAGCCCAAAAAAAATACGGAAATTTGCTATTCTCGGAAAGCATTCTTATCTTAGCAAATTATAGCAGAT TATAGCAAAGAGAGAGTTTC
Downstream 100 bases:
>100_bases GGAAGATGCTAAAGTTCACGGAGCCATACACCCGGTGCTGATAAAAATAAGGCAAAGATGAGAAGTCATTGGTCTTAGGA TGTTCCATGATGAATATCCC
Product: putative cardiolipin synthetase
Products: NA
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MLAAIHIQLIVGTIFIILYSVTILGLVLVIITENRNPLKTIPWVIVLLLAPGIGLLFYFFFGQDNRKQRIISRRTYKRIM KRPQEGKLPQDACVVPDPYKPLSTLLTNTNQSSLLYGTQITIYTNGTDKFKDLLEEIQKATHHIHIQYYIFCDDEIGKQV QQLLIKKVKEGVKVRVLYDDVGCWNVKDGFFKEMKEAGIEVYAFLRVAFPVFTSKVNYRNHRKIIVIDGKVGFMGGMNIA DRYDKGTSWGTWRDTHFKFVGKGVHGLQSVFLIDWYVVSKKLLNDRIYYPAAQIYSDNIMQIATSGPVGQWRTLLQATIF MIANAKKYIFIQTPYFLPTEGLNQALQTAALGGVDVRLMLPKRSDTRSANMASHSFIDEMVKAGVKVYLYKPGFLHSKLV VSDDALTSIGSANMDFRSFEHNFEINAFVYQKEFALQMKRIFTHDMHHCERLIPSRWLKRPLKQRMAESFMRLFSPLL
Sequences:
>Translated_478_residues MLAAIHIQLIVGTIFIILYSVTILGLVLVIITENRNPLKTIPWVIVLLLAPGIGLLFYFFFGQDNRKQRIISRRTYKRIM KRPQEGKLPQDACVVPDPYKPLSTLLTNTNQSSLLYGTQITIYTNGTDKFKDLLEEIQKATHHIHIQYYIFCDDEIGKQV QQLLIKKVKEGVKVRVLYDDVGCWNVKDGFFKEMKEAGIEVYAFLRVAFPVFTSKVNYRNHRKIIVIDGKVGFMGGMNIA DRYDKGTSWGTWRDTHFKFVGKGVHGLQSVFLIDWYVVSKKLLNDRIYYPAAQIYSDNIMQIATSGPVGQWRTLLQATIF MIANAKKYIFIQTPYFLPTEGLNQALQTAALGGVDVRLMLPKRSDTRSANMASHSFIDEMVKAGVKVYLYKPGFLHSKLV VSDDALTSIGSANMDFRSFEHNFEINAFVYQKEFALQMKRIFTHDMHHCERLIPSRWLKRPLKQRMAESFMRLFSPLL >Mature_478_residues MLAAIHIQLIVGTIFIILYSVTILGLVLVIITENRNPLKTIPWVIVLLLAPGIGLLFYFFFGQDNRKQRIISRRTYKRIM KRPQEGKLPQDACVVPDPYKPLSTLLTNTNQSSLLYGTQITIYTNGTDKFKDLLEEIQKATHHIHIQYYIFCDDEIGKQV QQLLIKKVKEGVKVRVLYDDVGCWNVKDGFFKEMKEAGIEVYAFLRVAFPVFTSKVNYRNHRKIIVIDGKVGFMGGMNIA DRYDKGTSWGTWRDTHFKFVGKGVHGLQSVFLIDWYVVSKKLLNDRIYYPAAQIYSDNIMQIATSGPVGQWRTLLQATIF MIANAKKYIFIQTPYFLPTEGLNQALQTAALGGVDVRLMLPKRSDTRSANMASHSFIDEMVKAGVKVYLYKPGFLHSKLV VSDDALTSIGSANMDFRSFEHNFEINAFVYQKEFALQMKRIFTHDMHHCERLIPSRWLKRPLKQRMAESFMRLFSPLL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=492, Percent_Identity=31.3008130081301, Blast_Score=217, Evalue=1e-57, Organism=Escherichia coli, GI1787007, Length=382, Percent_Identity=25.130890052356, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI87081826, Length=404, Percent_Identity=23.2673267326733, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 55008; Mature: 55008
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAAIHIQLIVGTIFIILYSVTILGLVLVIITENRNPLKTIPWVIVLLLAPGIGLLFYFF CEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHH FGQDNRKQRIISRRTYKRIMKRPQEGKLPQDACVVPDPYKPLSTLLTNTNQSSLLYGTQI HCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEE TIYTNGTDKFKDLLEEIQKATHHIHIQYYIFCDDEIGKQVQQLLIKKVKEGVKVRVLYDD EEEECCCHHHHHHHHHHHHHHCEEEEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEEC VGCWNVKDGFFKEMKEAGIEVYAFLRVAFPVFTSKVNYRNHRKIIVIDGKVGFMGGMNIA CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEECCCCCCHH DRYDKGTSWGTWRDTHFKFVGKGVHGLQSVFLIDWYVVSKKLLNDRIYYPAAQIYSDNIM HHCCCCCCCCCCCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEE QIATSGPVGQWRTLLQATIFMIANAKKYIFIQTPYFLPTEGLNQALQTAALGGVDVRLML EEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEE PKRSDTRSANMASHSFIDEMVKAGVKVYLYKPGFLHSKLVVSDDALTSIGSANMDFRSFE CCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCHHHHHCCCCCCCHHHHC HNFEINAFVYQKEFALQMKRIFTHDMHHCERLIPSRWLKRPLKQRMAESFMRLFSPLL CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLAAIHIQLIVGTIFIILYSVTILGLVLVIITENRNPLKTIPWVIVLLLAPGIGLLFYFF CEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHH FGQDNRKQRIISRRTYKRIMKRPQEGKLPQDACVVPDPYKPLSTLLTNTNQSSLLYGTQI HCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEE TIYTNGTDKFKDLLEEIQKATHHIHIQYYIFCDDEIGKQVQQLLIKKVKEGVKVRVLYDD EEEECCCHHHHHHHHHHHHHHCEEEEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEEC VGCWNVKDGFFKEMKEAGIEVYAFLRVAFPVFTSKVNYRNHRKIIVIDGKVGFMGGMNIA CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEECCCCCCHH DRYDKGTSWGTWRDTHFKFVGKGVHGLQSVFLIDWYVVSKKLLNDRIYYPAAQIYSDNIM HHCCCCCCCCCCCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCEE QIATSGPVGQWRTLLQATIFMIANAKKYIFIQTPYFLPTEGLNQALQTAALGGVDVRLML EEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEE PKRSDTRSANMASHSFIDEMVKAGVKVYLYKPGFLHSKLVVSDDALTSIGSANMDFRSFE CCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCHHHHHCCCCCCCHHHHC HNFEINAFVYQKEFALQMKRIFTHDMHHCERLIPSRWLKRPLKQRMAESFMRLFSPLL CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA