Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150009077

Identifier: 150009077

GI number: 150009077

Start: 2919107

End: 2921977

Strand: Direct

Name: 150009077

Synonym: BDI_2478

Alternate gene names: NA

Gene position: 2919107-2921977 (Clockwise)

Preceding gene: 150009076

Following gene: 150009078

Centisome position: 60.67

GC content: 46.39

Gene sequence:

>2871_bases
ATGAACCATGTCTATCTTTTCGTAATTGTAAACAATGTAATCCATATAGTTATGAAATCGGGAAAGTGCCTTTTGATGTT
GTTGATGATCCTTTTTTCACCGATGGCTTTCGCACAGCAAAGCGGTGTTAATGTTACCGGATCTGTCGTTGAGCAAGGTA
GTGATACCCCCATCGAGCAAGCAACGGTACGATTGCTGAACGTAAAAGACAGTGCCATGGTACGAGGTGTGGTGAGCGCC
CGTAATGGTAGTTTTACCTTGAAAAACGTAAAGAAAGGAAGTTATTTACTACACATCACATTCATCGGATACGATCCATT
GTACCAACCCTTGCAAATCACCGGAAAGAAAAACCCCGTAAACGTAGGTAAACTTGAATTAAGCGACGGAGCGATCGAGT
TGGGAGAAGCCGTAGTTATAGGTAAGGCACCCGAGGTTACCGTTCGCAACGACACTGTGGAATACAACGCGGATTCTTAT
AAAGTAACCGAAGGCTCCGTTTTGGAGGATTTATTGAAAAAGATGCCCGGTGTGGAGGTAGATAGCGAAGGCAAGATCAC
CGTCAATGGAAAAGAGGTGAAAAAGGTAATGGTGGACGGAAAGGAGTTCTTCTCCGATGACCCGAAAGTGGCCTCCAAGA
ATCTTCCAGCCAAGATGATCGATAAATTACAGGTACTTGATAAGAAAAGCGATATGGCCCAAATGACCGGCTTCGACGAT
GGAGAGGAAGAGACCGTCATCAACCTAACCGTGAAACCCGGCATGAAGCAAGGTTGGTTTGGCAACGCATATGGTGGATA
CGGAAGTAAAGATCGGTATGAAGGCAACGCCATGGTCAATCGTTTCGTGAATAATGACCAGATCACGTTCATGGGGGGAG
CGAATAACACGAATAATATGGGCTTTTCCGATCTAGCCTCAACAATGTTCTCCGGTATGGGAGGCGGTGGAGGCCGACGA
GGAGGTTTCGGAGCGGGTAGCGGTATCACCTCTTCCGGAAACGCAGGTTTGAACTTCAGCAAGGAATTCAAGCCGGATAA
ACTAACTCTTGGGGGAAATACTCGTTATTCCCATTCCGACAATGATGCTCGCAGCAAGAGTGATCGGCAGAATATCCTTC
CCGGAGATAGTTCCTCCTATGATAATAGCGAGGCGATGAGCCGTACGAAGAGCGATAACTTTGGCGTAGACTTTCGCTTG
GAATGGAAACCGGATACGATGACTCAACTTATCTTCCGCCCGAGTTTCAGCTTCAGCCACAGCATGAACGACAATTTCAG
TGATGCTACCACCTTGGATAACGAACGGGATACGGTCAATACCAACAAATCCAGTAATTACTCGGAAAGTAACGGGTACA
ACCTAAATGCCAGCATCGATTTCAGCCGTAAGCTGAATAACAAAGGACGTGTGTTCAGCGCCACCCTTTCTGGAGGCAAT
AGCGATTCGTACAGTGACGGCATGAACCGTTCCGACATCGTTTATTTCAACCAGACTGATGCCTTGAAGAATAGCATTAT
CGACCAGCGCTCACGTTACGACAACAAAGGTTTCAATTACCGGGCCTACGTATCGTGGGTAGAACCGATCGGGCATAATA
ATTTCATCCAAGCCACTTATAGCATCAGCCAACGGAAACAAGAAGCCTTGAAGAATGTTTACAACCAAGACGCTGATGGT
ATATATAATGTATTAGATTCCGCCTACAGCCAAAGCTATCGCAATAACTTTATCAGCCAGCGGGCCAGCTTGAGCTTCAA
GTCTCAACGGGCAAAGTTCAACTACACGATCGGCTTGAATCTGGACCCATCCTATTCCAGCAGCGAGAATTTCGTTGGCG
ACACGACCTTATCCAAGATAACCCGTAAGGTGGTCAACCTCTCCCCGATGGCTCAATTCAACTATATGTTCGATAAGCGT
ACGAATCTTCGTATCATGTATAATGGCCGTACCAGCCAACCGAGCATGACTCAATTACAACCGGTAGCGGATATCTCGGA
CCCGACGAATATCACGATCGGTAACCCGGATTTGAATCCCCGCTATACGAACAACGTATTTATTCGTTTCCAACAGTTCA
CACCGGAGAAACAACGGGCCTTTATGATCATGGCAAACGGTAGTTATATCATCAACGATATCGTAAGTTATACCTCTTAT
AACCAAGAGACAGGTGTAAAGACCACCACTTACAAAAACGTAAATGGCAACTATAGTGGCAACGTCCGTATGATGTTGAA
TACCCCCTTGAAGAATAAGAAATTCTCCATCAACTCCATGACAATGGCCTCGTTCGCTAATAGCAACGGATATATCAACG
AGGAGAAGAATACGAACCGGAATCTCATATTGTCCGAACGTGGTGGTATCGACTTCCGCTCCTCTTATCTGGATCTGGGC
GTAAACGGGAATATTCGTTACAATGCCACCAGCAACTCCCTGCAAAAGGAAAATAACCAAAACACCTTCAATTACGGAGC
CGGCGGTTACACGACAATCTATCTGCCCCTCAATTTCAAGATAGAGAGTGACGTGAACTGGTCTACCAACTCTGGCTACG
GGGACGGATTCAAACAGAACGAAGTCCTATGGAATGCCTCAGCCTCCAAGTCTTTCTTAAAGAATAACCAAGGGACGCTC
CGTTTCAAGATCTACGATATCCTGCAACAACGAAGCAATATCTCCCGTTCCATTACCGCTAGCTATATACAAGACTCAGA
ATATAACACGCTAGGCAGTTATTTCATGGTACACTTCATCTATCGGTTCAGCATCTTCAAAGGCGGAGCCAGTGCCAGCG
ACGTGAAAACGCCGGGTAGAAGCGGACGGGGAAGAGGTCCGATGGGTCCTCCTCCGGGACATCGATTTTAA

Upstream 100 bases:

>100_bases
TTTATAATGTTCTTGTTCTAAGAATACTCTCCATAAATCCAAAGGCCTGCACGATTGTTAATAATATCAAATCCATAAAA
GTTATATTAAACTATTTTGA

Downstream 100 bases:

>100_bases
TCCCCTAAGTGGAGACTTTATAAAGTCCGTACGCAACAAAAAACGCACCGGACTTGTTTTTACTTAGGATAATATATAAA
AAACTTAGGATAAAATAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor Plug; Nb-Dependent Receptor; NB Dependent/Ligand-Gated Channel; NB Dependent Receptor; NB-Dependent Receptor Domain-Containing Protein; NB-Dependent Receptor Exported Protein; NB-Dependent Receptor Plug Domain Protein; Carboxypeptidase-Like Regulatory Region; Outer Membrane Receptor Family Transporter

Number of amino acids: Translated: 956; Mature: 956

Protein sequence:

>956_residues
MNHVYLFVIVNNVIHIVMKSGKCLLMLLMILFSPMAFAQQSGVNVTGSVVEQGSDTPIEQATVRLLNVKDSAMVRGVVSA
RNGSFTLKNVKKGSYLLHITFIGYDPLYQPLQITGKKNPVNVGKLELSDGAIELGEAVVIGKAPEVTVRNDTVEYNADSY
KVTEGSVLEDLLKKMPGVEVDSEGKITVNGKEVKKVMVDGKEFFSDDPKVASKNLPAKMIDKLQVLDKKSDMAQMTGFDD
GEEETVINLTVKPGMKQGWFGNAYGGYGSKDRYEGNAMVNRFVNNDQITFMGGANNTNNMGFSDLASTMFSGMGGGGGRR
GGFGAGSGITSSGNAGLNFSKEFKPDKLTLGGNTRYSHSDNDARSKSDRQNILPGDSSSYDNSEAMSRTKSDNFGVDFRL
EWKPDTMTQLIFRPSFSFSHSMNDNFSDATTLDNERDTVNTNKSSNYSESNGYNLNASIDFSRKLNNKGRVFSATLSGGN
SDSYSDGMNRSDIVYFNQTDALKNSIIDQRSRYDNKGFNYRAYVSWVEPIGHNNFIQATYSISQRKQEALKNVYNQDADG
IYNVLDSAYSQSYRNNFISQRASLSFKSQRAKFNYTIGLNLDPSYSSSENFVGDTTLSKITRKVVNLSPMAQFNYMFDKR
TNLRIMYNGRTSQPSMTQLQPVADISDPTNITIGNPDLNPRYTNNVFIRFQQFTPEKQRAFMIMANGSYIINDIVSYTSY
NQETGVKTTTYKNVNGNYSGNVRMMLNTPLKNKKFSINSMTMASFANSNGYINEEKNTNRNLILSERGGIDFRSSYLDLG
VNGNIRYNATSNSLQKENNQNTFNYGAGGYTTIYLPLNFKIESDVNWSTNSGYGDGFKQNEVLWNASASKSFLKNNQGTL
RFKIYDILQQRSNISRSITASYIQDSEYNTLGSYFMVHFIYRFSIFKGGASASDVKTPGRSGRGRGPMGPPPGHRF

Sequences:

>Translated_956_residues
MNHVYLFVIVNNVIHIVMKSGKCLLMLLMILFSPMAFAQQSGVNVTGSVVEQGSDTPIEQATVRLLNVKDSAMVRGVVSA
RNGSFTLKNVKKGSYLLHITFIGYDPLYQPLQITGKKNPVNVGKLELSDGAIELGEAVVIGKAPEVTVRNDTVEYNADSY
KVTEGSVLEDLLKKMPGVEVDSEGKITVNGKEVKKVMVDGKEFFSDDPKVASKNLPAKMIDKLQVLDKKSDMAQMTGFDD
GEEETVINLTVKPGMKQGWFGNAYGGYGSKDRYEGNAMVNRFVNNDQITFMGGANNTNNMGFSDLASTMFSGMGGGGGRR
GGFGAGSGITSSGNAGLNFSKEFKPDKLTLGGNTRYSHSDNDARSKSDRQNILPGDSSSYDNSEAMSRTKSDNFGVDFRL
EWKPDTMTQLIFRPSFSFSHSMNDNFSDATTLDNERDTVNTNKSSNYSESNGYNLNASIDFSRKLNNKGRVFSATLSGGN
SDSYSDGMNRSDIVYFNQTDALKNSIIDQRSRYDNKGFNYRAYVSWVEPIGHNNFIQATYSISQRKQEALKNVYNQDADG
IYNVLDSAYSQSYRNNFISQRASLSFKSQRAKFNYTIGLNLDPSYSSSENFVGDTTLSKITRKVVNLSPMAQFNYMFDKR
TNLRIMYNGRTSQPSMTQLQPVADISDPTNITIGNPDLNPRYTNNVFIRFQQFTPEKQRAFMIMANGSYIINDIVSYTSY
NQETGVKTTTYKNVNGNYSGNVRMMLNTPLKNKKFSINSMTMASFANSNGYINEEKNTNRNLILSERGGIDFRSSYLDLG
VNGNIRYNATSNSLQKENNQNTFNYGAGGYTTIYLPLNFKIESDVNWSTNSGYGDGFKQNEVLWNASASKSFLKNNQGTL
RFKIYDILQQRSNISRSITASYIQDSEYNTLGSYFMVHFIYRFSIFKGGASASDVKTPGRSGRGRGPMGPPPGHRF
>Mature_956_residues
MNHVYLFVIVNNVIHIVMKSGKCLLMLLMILFSPMAFAQQSGVNVTGSVVEQGSDTPIEQATVRLLNVKDSAMVRGVVSA
RNGSFTLKNVKKGSYLLHITFIGYDPLYQPLQITGKKNPVNVGKLELSDGAIELGEAVVIGKAPEVTVRNDTVEYNADSY
KVTEGSVLEDLLKKMPGVEVDSEGKITVNGKEVKKVMVDGKEFFSDDPKVASKNLPAKMIDKLQVLDKKSDMAQMTGFDD
GEEETVINLTVKPGMKQGWFGNAYGGYGSKDRYEGNAMVNRFVNNDQITFMGGANNTNNMGFSDLASTMFSGMGGGGGRR
GGFGAGSGITSSGNAGLNFSKEFKPDKLTLGGNTRYSHSDNDARSKSDRQNILPGDSSSYDNSEAMSRTKSDNFGVDFRL
EWKPDTMTQLIFRPSFSFSHSMNDNFSDATTLDNERDTVNTNKSSNYSESNGYNLNASIDFSRKLNNKGRVFSATLSGGN
SDSYSDGMNRSDIVYFNQTDALKNSIIDQRSRYDNKGFNYRAYVSWVEPIGHNNFIQATYSISQRKQEALKNVYNQDADG
IYNVLDSAYSQSYRNNFISQRASLSFKSQRAKFNYTIGLNLDPSYSSSENFVGDTTLSKITRKVVNLSPMAQFNYMFDKR
TNLRIMYNGRTSQPSMTQLQPVADISDPTNITIGNPDLNPRYTNNVFIRFQQFTPEKQRAFMIMANGSYIINDIVSYTSY
NQETGVKTTTYKNVNGNYSGNVRMMLNTPLKNKKFSINSMTMASFANSNGYINEEKNTNRNLILSERGGIDFRSSYLDLG
VNGNIRYNATSNSLQKENNQNTFNYGAGGYTTIYLPLNFKIESDVNWSTNSGYGDGFKQNEVLWNASASKSFLKNNQGTL
RFKIYDILQQRSNISRSITASYIQDSEYNTLGSYFMVHFIYRFSIFKGGASASDVKTPGRSGRGRGPMGPPPGHRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 106233; Mature: 106233

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHVYLFVIVNNVIHIVMKSGKCLLMLLMILFSPMAFAQQSGVNVTGSVVEQGSDTPIEQ
CCEEEEEEEHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHCCCCEEHHHHHCCCCCCHHH
ATVRLLNVKDSAMVRGVVSARNGSFTLKNVKKGSYLLHITFIGYDPLYQPLQITGKKNPV
HEEEEEECCCHHHHHHHEECCCCCEEEEEECCCCEEEEEEEECCCCCCCCEEECCCCCCC
NVGKLELSDGAIELGEAVVIGKAPEVTVRNDTVEYNADSYKVTEGSVLEDLLKKMPGVEV
CEEEEEECCCCEECCCEEEECCCCCEEEECCEEEECCCCEEECCCHHHHHHHHHCCCCEE
DSEGKITVNGKEVKKVMVDGKEFFSDDPKVASKNLPAKMIDKLQVLDKKSDMAQMTGFDD
CCCCEEEECHHHHHHHHHCCHHHHCCCCCHHCCCCCHHHHHHHHHHHCCCCHHHHCCCCC
GEEETVINLTVKPGMKQGWFGNAYGGYGSKDRYEGNAMVNRFVNNDQITFMGGANNTNNM
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCC
GFSDLASTMFSGMGGGGGRRGGFGAGSGITSSGNAGLNFSKEFKPDKLTLGGNTRYSHSD
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
NDARSKSDRQNILPGDSSSYDNSEAMSRTKSDNFGVDFRLEWKPDTMTQLIFRPSFSFSH
CCHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCHHHHEEECCCCCCCC
SMNDNFSDATTLDNERDTVNTNKSSNYSESNGYNLNASIDFSRKLNNKGRVFSATLSGGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHCCCCCCEEEEEECCCC
SDSYSDGMNRSDIVYFNQTDALKNSIIDQRSRYDNKGFNYRAYVSWVEPIGHNNFIQATY
CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEH
SISQRKQEALKNVYNQDADGIYNVLDSAYSQSYRNNFISQRASLSFKSQRAKFNYTIGLN
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEE
LDPSYSSSENFVGDTTLSKITRKVVNLSPMAQFNYMFDKRTNLRIMYNGRTSQPSMTQLQ
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHEEEECCCCCEEEEECCCCCCCCHHHCC
PVADISDPTNITIGNPDLNPRYTNNVFIRFQQFTPEKQRAFMIMANGSYIINDIVSYTSY
CCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHCC
NQETGVKTTTYKNVNGNYSGNVRMMLNTPLKNKKFSINSMTMASFANSNGYINEEKNTNR
CCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCEEEECCEEEEEECCCCCEECCCCCCCC
NLILSERGGIDFRSSYLDLGVNGNIRYNATSNSLQKENNQNTFNYGAGGYTTIYLPLNFK
CEEEECCCCCCEECCEEEECCCCCEEECCCCCHHHHCCCCCCEEECCCCEEEEEEEEEEE
IESDVNWSTNSGYGDGFKQNEVLWNASASKSFLKNNQGTLRFKIYDILQQRSNISRSITA
ECCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCEEEEEHHHHHHHHHCCCHHHHH
SYIQDSEYNTLGSYFMVHFIYRFSIFKGGASASDVKTPGRSGRGRGPMGPPPGHRF
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNHVYLFVIVNNVIHIVMKSGKCLLMLLMILFSPMAFAQQSGVNVTGSVVEQGSDTPIEQ
CCEEEEEEEHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHCCCCEEHHHHHCCCCCCHHH
ATVRLLNVKDSAMVRGVVSARNGSFTLKNVKKGSYLLHITFIGYDPLYQPLQITGKKNPV
HEEEEEECCCHHHHHHHEECCCCCEEEEEECCCCEEEEEEEECCCCCCCCEEECCCCCCC
NVGKLELSDGAIELGEAVVIGKAPEVTVRNDTVEYNADSYKVTEGSVLEDLLKKMPGVEV
CEEEEEECCCCEECCCEEEECCCCCEEEECCEEEECCCCEEECCCHHHHHHHHHCCCCEE
DSEGKITVNGKEVKKVMVDGKEFFSDDPKVASKNLPAKMIDKLQVLDKKSDMAQMTGFDD
CCCCEEEECHHHHHHHHHCCHHHHCCCCCHHCCCCCHHHHHHHHHHHCCCCHHHHCCCCC
GEEETVINLTVKPGMKQGWFGNAYGGYGSKDRYEGNAMVNRFVNNDQITFMGGANNTNNM
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCC
GFSDLASTMFSGMGGGGGRRGGFGAGSGITSSGNAGLNFSKEFKPDKLTLGGNTRYSHSD
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
NDARSKSDRQNILPGDSSSYDNSEAMSRTKSDNFGVDFRLEWKPDTMTQLIFRPSFSFSH
CCHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCHHHHEEECCCCCCCC
SMNDNFSDATTLDNERDTVNTNKSSNYSESNGYNLNASIDFSRKLNNKGRVFSATLSGGN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHCCCCCCEEEEEECCCC
SDSYSDGMNRSDIVYFNQTDALKNSIIDQRSRYDNKGFNYRAYVSWVEPIGHNNFIQATY
CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEH
SISQRKQEALKNVYNQDADGIYNVLDSAYSQSYRNNFISQRASLSFKSQRAKFNYTIGLN
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEE
LDPSYSSSENFVGDTTLSKITRKVVNLSPMAQFNYMFDKRTNLRIMYNGRTSQPSMTQLQ
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHEEEECCCCCEEEEECCCCCCCCHHHCC
PVADISDPTNITIGNPDLNPRYTNNVFIRFQQFTPEKQRAFMIMANGSYIINDIVSYTSY
CCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHCC
NQETGVKTTTYKNVNGNYSGNVRMMLNTPLKNKKFSINSMTMASFANSNGYINEEKNTNR
CCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCEEEECCEEEEEECCCCCEECCCCCCCC
NLILSERGGIDFRSSYLDLGVNGNIRYNATSNSLQKENNQNTFNYGAGGYTTIYLPLNFK
CEEEECCCCCCEECCEEEECCCCCEEECCCCCHHHHCCCCCCEEECCCCEEEEEEEEEEE
IESDVNWSTNSGYGDGFKQNEVLWNASASKSFLKNNQGTLRFKIYDILQQRSNISRSITA
ECCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCEEEEEHHHHHHHHHCCCHHHHH
SYIQDSEYNTLGSYFMVHFIYRFSIFKGGASASDVKTPGRSGRGRGPMGPPPGHRF
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA