| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009004
Identifier: 150009004
GI number: 150009004
Start: 2812831
End: 2813946
Strand: Reverse
Name: 150009004
Synonym: BDI_2400
Alternate gene names: NA
Gene position: 2813946-2812831 (Counterclockwise)
Preceding gene: 150009007
Following gene: 150009003
Centisome position: 58.49
GC content: 47.85
Gene sequence:
>1116_bases ATGAAGCGAATTCTTTTAGGAGTGATCGGCTTGCTGTGTTTATGTGTGGCTTGCCTGCGGAAGGATCTTTCTTTTAAGCC GGGGGAAGTTTGGCCGGATGATAAAGGGGTACATATAAACGCTCATGGTGGCGGTATTCTACGGGTTGGGGATACTTATT ATTGGTTTGGTGAACATAAAACGGAGGGCTCGGCTGGAAATCTGGCTCAAGTAGGCGTTCATTGCTATTCGTCGAAAGAT TTATATAATTGGAAAGACGAGGGAATCGCCTTATCGGTCGTGCCGGATGATACGACGAGCCATATTGTTAAGGGATGCGT GTTGGAGCGTCCGAAAGTGATTTATAATAAAAAGAATGATCAATATGTAATGTGGTTTCATTTAGAGCCGAGAGGTGCTG GCTATTCGGGAGCATTGAGTGGAGTGGCTGTCAGTAAAAACGTGGCGGGGCCTTACTCGTTCGTAAACGCTTTCCGTCCG AATGCCGGTTTTTGGCCGGTTAATGTACAGGAACTACATAAGCAACCTTGTACGTTTTCCGCAGATCTACGTTTTAGCGG TGGAGAGTTACCTGCCCATCCGGATAGCTTGAATTTATTGGGGCGTGACCAAATCTCCGGACAAATGGCTAGGGATATGA ACCTTTTCGTGGATGACGATGGCATCGCTTATCATATTTATTCCTCGGAAGAGAATAGTACCTTGCATATATCGCAGCTG ACCGATGATTATACGAGTTATTCCGGTAAGTACGCCCGTTTCTTCCCGGGGCGTTTCATGGAAGCTCCAGCCTTGTTCAA ACAGAAGGGGAAATATTATTTGATTATGTCCGGCTGTACGGGCTGGGCTCCGAATGCGGGACGATCGGCGGTCGCTTCCT CGATTTGGGGACCTTGGAAGGAATTGGAAAATCCGTTTAGGGGAGAGAACTCGGAGGTGTCGTTTTATTCTCAGAGCACG TACGTATTGCCTGTACCCGGCCATGCGGATCGCTTTATTTATATGGGAGATCGTTGGACTCCGGAGAACGCTATAGACGG ACGTTATATCTGGCTTCCTATCCGATTCGAGGGGGAGCAACCCGTGATCGAGTGGCGATCTGAGTGGAGTTATTAA
Upstream 100 bases:
>100_bases AAACAAGATTGGTTTTATTTGTAAATCCTATGGTATTAAAGTTTGCCACATCCCTCTTTTTTAACTATGTTTGTTTTCTT AAATACTAAAAAATACTTTT
Downstream 100 bases:
>100_bases ATTCTCTTATCGCTTTTTTGCGAATGTATGTGATGTAGATCTGCGGATTATCACGTACATTCGCGTTAAATTTTTAAGTA GCTTATGTCAGACGAACAAC
Product: glycoside hydrolase family beta-glycosidase
Products: NA
Alternate protein names: Beta-Xylosidase; Glycoside Hydrolase Family; Ricin B Lectin; Licheninase; Glycosyl Hydrolase Family; Family; Coagulation Factor 5/8 Type Domain Protein; S-Layer Domain Protein; Glycoside Hydrolase Family Beta-Glycosidase; Xylosidase/Arabinofuranosidase; Ricin-Type Beta-Trefoil Lectin Domain Protein; Beta-Galactosidase; Cna B Domain Protein
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MKRILLGVIGLLCLCVACLRKDLSFKPGEVWPDDKGVHINAHGGGILRVGDTYYWFGEHKTEGSAGNLAQVGVHCYSSKD LYNWKDEGIALSVVPDDTTSHIVKGCVLERPKVIYNKKNDQYVMWFHLEPRGAGYSGALSGVAVSKNVAGPYSFVNAFRP NAGFWPVNVQELHKQPCTFSADLRFSGGELPAHPDSLNLLGRDQISGQMARDMNLFVDDDGIAYHIYSSEENSTLHISQL TDDYTSYSGKYARFFPGRFMEAPALFKQKGKYYLIMSGCTGWAPNAGRSAVASSIWGPWKELENPFRGENSEVSFYSQST YVLPVPGHADRFIYMGDRWTPENAIDGRYIWLPIRFEGEQPVIEWRSEWSY
Sequences:
>Translated_371_residues MKRILLGVIGLLCLCVACLRKDLSFKPGEVWPDDKGVHINAHGGGILRVGDTYYWFGEHKTEGSAGNLAQVGVHCYSSKD LYNWKDEGIALSVVPDDTTSHIVKGCVLERPKVIYNKKNDQYVMWFHLEPRGAGYSGALSGVAVSKNVAGPYSFVNAFRP NAGFWPVNVQELHKQPCTFSADLRFSGGELPAHPDSLNLLGRDQISGQMARDMNLFVDDDGIAYHIYSSEENSTLHISQL TDDYTSYSGKYARFFPGRFMEAPALFKQKGKYYLIMSGCTGWAPNAGRSAVASSIWGPWKELENPFRGENSEVSFYSQST YVLPVPGHADRFIYMGDRWTPENAIDGRYIWLPIRFEGEQPVIEWRSEWSY >Mature_371_residues MKRILLGVIGLLCLCVACLRKDLSFKPGEVWPDDKGVHINAHGGGILRVGDTYYWFGEHKTEGSAGNLAQVGVHCYSSKD LYNWKDEGIALSVVPDDTTSHIVKGCVLERPKVIYNKKNDQYVMWFHLEPRGAGYSGALSGVAVSKNVAGPYSFVNAFRP NAGFWPVNVQELHKQPCTFSADLRFSGGELPAHPDSLNLLGRDQISGQMARDMNLFVDDDGIAYHIYSSEENSTLHISQL TDDYTSYSGKYARFFPGRFMEAPALFKQKGKYYLIMSGCTGWAPNAGRSAVASSIWGPWKELENPFRGENSEVSFYSQST YVLPVPGHADRFIYMGDRWTPENAIDGRYIWLPIRFEGEQPVIEWRSEWSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41656; Mature: 41656
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILLGVIGLLCLCVACLRKDLSFKPGEVWPDDKGVHINAHGGGILRVGDTYYWFGEHK CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEECCEEEECCCCC TEGSAGNLAQVGVHCYSSKDLYNWKDEGIALSVVPDDTTSHIVKGCVLERPKVIYNKKND CCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEECCCC QYVMWFHLEPRGAGYSGALSGVAVSKNVAGPYSFVNAFRPNAGFWPVNVQELHKQPCTFS CEEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCHHHHCCCCCCEE ADLRFSGGELPAHPDSLNLLGRDQISGQMARDMNLFVDDDGIAYHIYSSEENSTLHISQL EEEEECCCCCCCCCCCCCEEECHHHCCHHHCCCEEEECCCCEEEEEEECCCCCEEEEEEC TDDYTSYSGKYARFFPGRFMEAPALFKQKGKYYLIMSGCTGWAPNAGRSAVASSIWGPWK CCHHHHCCCCEEEECCCCHHCCCHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCHH ELENPFRGENSEVSFYSQSTYVLPVPGHADRFIYMGDRWTPENAIDGRYIWLPIRFEGEQ HHCCCCCCCCCEEEEEECCEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCC PVIEWRSEWSY CHHHHCCCCCC >Mature Secondary Structure MKRILLGVIGLLCLCVACLRKDLSFKPGEVWPDDKGVHINAHGGGILRVGDTYYWFGEHK CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEECCEEEECCCCC TEGSAGNLAQVGVHCYSSKDLYNWKDEGIALSVVPDDTTSHIVKGCVLERPKVIYNKKND CCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEECCCC QYVMWFHLEPRGAGYSGALSGVAVSKNVAGPYSFVNAFRPNAGFWPVNVQELHKQPCTFS CEEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCHHHHCCCCCCEE ADLRFSGGELPAHPDSLNLLGRDQISGQMARDMNLFVDDDGIAYHIYSSEENSTLHISQL EEEEECCCCCCCCCCCCCEEECHHHCCHHHCCCEEEECCCCEEEEEEECCCCCEEEEEEC TDDYTSYSGKYARFFPGRFMEAPALFKQKGKYYLIMSGCTGWAPNAGRSAVASSIWGPWK CCHHHHCCCCEEEECCCCHHCCCHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCHH ELENPFRGENSEVSFYSQSTYVLPVPGHADRFIYMGDRWTPENAIDGRYIWLPIRFEGEQ HHCCCCCCCCCEEEEEECCEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCC PVIEWRSEWSY CHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA