Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150009004

Identifier: 150009004

GI number: 150009004

Start: 2812831

End: 2813946

Strand: Reverse

Name: 150009004

Synonym: BDI_2400

Alternate gene names: NA

Gene position: 2813946-2812831 (Counterclockwise)

Preceding gene: 150009007

Following gene: 150009003

Centisome position: 58.49

GC content: 47.85

Gene sequence:

>1116_bases
ATGAAGCGAATTCTTTTAGGAGTGATCGGCTTGCTGTGTTTATGTGTGGCTTGCCTGCGGAAGGATCTTTCTTTTAAGCC
GGGGGAAGTTTGGCCGGATGATAAAGGGGTACATATAAACGCTCATGGTGGCGGTATTCTACGGGTTGGGGATACTTATT
ATTGGTTTGGTGAACATAAAACGGAGGGCTCGGCTGGAAATCTGGCTCAAGTAGGCGTTCATTGCTATTCGTCGAAAGAT
TTATATAATTGGAAAGACGAGGGAATCGCCTTATCGGTCGTGCCGGATGATACGACGAGCCATATTGTTAAGGGATGCGT
GTTGGAGCGTCCGAAAGTGATTTATAATAAAAAGAATGATCAATATGTAATGTGGTTTCATTTAGAGCCGAGAGGTGCTG
GCTATTCGGGAGCATTGAGTGGAGTGGCTGTCAGTAAAAACGTGGCGGGGCCTTACTCGTTCGTAAACGCTTTCCGTCCG
AATGCCGGTTTTTGGCCGGTTAATGTACAGGAACTACATAAGCAACCTTGTACGTTTTCCGCAGATCTACGTTTTAGCGG
TGGAGAGTTACCTGCCCATCCGGATAGCTTGAATTTATTGGGGCGTGACCAAATCTCCGGACAAATGGCTAGGGATATGA
ACCTTTTCGTGGATGACGATGGCATCGCTTATCATATTTATTCCTCGGAAGAGAATAGTACCTTGCATATATCGCAGCTG
ACCGATGATTATACGAGTTATTCCGGTAAGTACGCCCGTTTCTTCCCGGGGCGTTTCATGGAAGCTCCAGCCTTGTTCAA
ACAGAAGGGGAAATATTATTTGATTATGTCCGGCTGTACGGGCTGGGCTCCGAATGCGGGACGATCGGCGGTCGCTTCCT
CGATTTGGGGACCTTGGAAGGAATTGGAAAATCCGTTTAGGGGAGAGAACTCGGAGGTGTCGTTTTATTCTCAGAGCACG
TACGTATTGCCTGTACCCGGCCATGCGGATCGCTTTATTTATATGGGAGATCGTTGGACTCCGGAGAACGCTATAGACGG
ACGTTATATCTGGCTTCCTATCCGATTCGAGGGGGAGCAACCCGTGATCGAGTGGCGATCTGAGTGGAGTTATTAA

Upstream 100 bases:

>100_bases
AAACAAGATTGGTTTTATTTGTAAATCCTATGGTATTAAAGTTTGCCACATCCCTCTTTTTTAACTATGTTTGTTTTCTT
AAATACTAAAAAATACTTTT

Downstream 100 bases:

>100_bases
ATTCTCTTATCGCTTTTTTGCGAATGTATGTGATGTAGATCTGCGGATTATCACGTACATTCGCGTTAAATTTTTAAGTA
GCTTATGTCAGACGAACAAC

Product: glycoside hydrolase family beta-glycosidase

Products: NA

Alternate protein names: Beta-Xylosidase; Glycoside Hydrolase Family; Ricin B Lectin; Licheninase; Glycosyl Hydrolase Family; Family; Coagulation Factor 5/8 Type Domain Protein; S-Layer Domain Protein; Glycoside Hydrolase Family Beta-Glycosidase; Xylosidase/Arabinofuranosidase; Ricin-Type Beta-Trefoil Lectin Domain Protein; Beta-Galactosidase; Cna B Domain Protein

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MKRILLGVIGLLCLCVACLRKDLSFKPGEVWPDDKGVHINAHGGGILRVGDTYYWFGEHKTEGSAGNLAQVGVHCYSSKD
LYNWKDEGIALSVVPDDTTSHIVKGCVLERPKVIYNKKNDQYVMWFHLEPRGAGYSGALSGVAVSKNVAGPYSFVNAFRP
NAGFWPVNVQELHKQPCTFSADLRFSGGELPAHPDSLNLLGRDQISGQMARDMNLFVDDDGIAYHIYSSEENSTLHISQL
TDDYTSYSGKYARFFPGRFMEAPALFKQKGKYYLIMSGCTGWAPNAGRSAVASSIWGPWKELENPFRGENSEVSFYSQST
YVLPVPGHADRFIYMGDRWTPENAIDGRYIWLPIRFEGEQPVIEWRSEWSY

Sequences:

>Translated_371_residues
MKRILLGVIGLLCLCVACLRKDLSFKPGEVWPDDKGVHINAHGGGILRVGDTYYWFGEHKTEGSAGNLAQVGVHCYSSKD
LYNWKDEGIALSVVPDDTTSHIVKGCVLERPKVIYNKKNDQYVMWFHLEPRGAGYSGALSGVAVSKNVAGPYSFVNAFRP
NAGFWPVNVQELHKQPCTFSADLRFSGGELPAHPDSLNLLGRDQISGQMARDMNLFVDDDGIAYHIYSSEENSTLHISQL
TDDYTSYSGKYARFFPGRFMEAPALFKQKGKYYLIMSGCTGWAPNAGRSAVASSIWGPWKELENPFRGENSEVSFYSQST
YVLPVPGHADRFIYMGDRWTPENAIDGRYIWLPIRFEGEQPVIEWRSEWSY
>Mature_371_residues
MKRILLGVIGLLCLCVACLRKDLSFKPGEVWPDDKGVHINAHGGGILRVGDTYYWFGEHKTEGSAGNLAQVGVHCYSSKD
LYNWKDEGIALSVVPDDTTSHIVKGCVLERPKVIYNKKNDQYVMWFHLEPRGAGYSGALSGVAVSKNVAGPYSFVNAFRP
NAGFWPVNVQELHKQPCTFSADLRFSGGELPAHPDSLNLLGRDQISGQMARDMNLFVDDDGIAYHIYSSEENSTLHISQL
TDDYTSYSGKYARFFPGRFMEAPALFKQKGKYYLIMSGCTGWAPNAGRSAVASSIWGPWKELENPFRGENSEVSFYSQST
YVLPVPGHADRFIYMGDRWTPENAIDGRYIWLPIRFEGEQPVIEWRSEWSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41656; Mature: 41656

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILLGVIGLLCLCVACLRKDLSFKPGEVWPDDKGVHINAHGGGILRVGDTYYWFGEHK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEECCEEEECCCCC
TEGSAGNLAQVGVHCYSSKDLYNWKDEGIALSVVPDDTTSHIVKGCVLERPKVIYNKKND
CCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEECCCC
QYVMWFHLEPRGAGYSGALSGVAVSKNVAGPYSFVNAFRPNAGFWPVNVQELHKQPCTFS
CEEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCHHHHCCCCCCEE
ADLRFSGGELPAHPDSLNLLGRDQISGQMARDMNLFVDDDGIAYHIYSSEENSTLHISQL
EEEEECCCCCCCCCCCCCEEECHHHCCHHHCCCEEEECCCCEEEEEEECCCCCEEEEEEC
TDDYTSYSGKYARFFPGRFMEAPALFKQKGKYYLIMSGCTGWAPNAGRSAVASSIWGPWK
CCHHHHCCCCEEEECCCCHHCCCHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCHH
ELENPFRGENSEVSFYSQSTYVLPVPGHADRFIYMGDRWTPENAIDGRYIWLPIRFEGEQ
HHCCCCCCCCCEEEEEECCEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCC
PVIEWRSEWSY
CHHHHCCCCCC
>Mature Secondary Structure
MKRILLGVIGLLCLCVACLRKDLSFKPGEVWPDDKGVHINAHGGGILRVGDTYYWFGEHK
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEECCEEEECCCCC
TEGSAGNLAQVGVHCYSSKDLYNWKDEGIALSVVPDDTTSHIVKGCVLERPKVIYNKKND
CCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEECCCC
QYVMWFHLEPRGAGYSGALSGVAVSKNVAGPYSFVNAFRPNAGFWPVNVQELHKQPCTFS
CEEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCHHHHCCCCCCEE
ADLRFSGGELPAHPDSLNLLGRDQISGQMARDMNLFVDDDGIAYHIYSSEENSTLHISQL
EEEEECCCCCCCCCCCCCEEECHHHCCHHHCCCEEEECCCCEEEEEEECCCCCEEEEEEC
TDDYTSYSGKYARFFPGRFMEAPALFKQKGKYYLIMSGCTGWAPNAGRSAVASSIWGPWK
CCHHHHCCCCEEEECCCCHHCCCHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCHH
ELENPFRGENSEVSFYSQSTYVLPVPGHADRFIYMGDRWTPENAIDGRYIWLPIRFEGEQ
HHCCCCCCCCCEEEEEECCEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCC
PVIEWRSEWSY
CHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA