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The map label for this gene is clpX [H]

Identifier: 150008999

GI number: 150008999

Start: 2807510

End: 2808742

Strand: Reverse

Name: clpX [H]

Synonym: BDI_2395

Alternate gene names: 150008999

Gene position: 2808742-2807510 (Counterclockwise)

Preceding gene: 150009000

Following gene: 150008998

Centisome position: 58.38

GC content: 47.28

Gene sequence:

>1233_bases
ATGGCCAAAACAACAGGCGATACATGTACGTTTTGCGGCAGGAGTAGCCGTGATGTTAATTTGCTTATCAATGGGATCTC
TGGTTGTATTTGCGATGATTGTGCCCGGCAGGCGTATGAGATCGTAAAGGAGCAGACAGGAGGTAAGAAAACTTCTTTTG
GTTTGAAGCAGAAAGATCTGCCTAAACCGGAAGATATCAAGACTTTCTTGGATCAGTACGTGATCGGGCAGGATGACGCG
AAGCGTTATCTGTCGGTATCGGTGTACAACCATTACAAGCGTTTACTTCAAAAGGTTACCGCCGATGATGTAGAGATTGA
GAAATCTAATATTATCATGGTGGGCGCTACCGGTACGGGCAAGACTTTGTTAGCCCGTACGATCGCTAAGTTATTGCATG
TCCCGTTCGCTATCGTGGACGCTACGGTACTTACCGAGGCAGGTTACGTGGGGGAGGATATTGAGAGTATCTTGACCCGG
CTATTGCAAGCGGCGGATTATGATGTGGAGGCGGCCCAACGGGGTATCGTCTTCATCGATGAGATCGATAAGATCGCACG
TAAGAGCGATAATCCGTCTATCACTCGGGATGTCAGCGGTGAGGGTGTACAGCAAGGTTTGCTGAAACTTCTAGAAGGAT
CGATCGTGAATGTGCCTCCTCAGGGGGGACGTAAGCATCCGGAGCAAAAGATGATTGCGGTGGATACGAAGAATATCCTG
TTCGTTTGCGGTGGTGCTTTCGATGGAATCGAGAAGAAGATCGCTCAACGCTTAAATACCCGTGTGGTCGGTTATTCGGC
TAGTTTGGATACGGCTACCGTAGACCGGAATAATTTACTGAAATACATCACCCCGACTGATTTGAAGTCGTTTGGCTTGA
TCCCGGAGATTATCGGTCGTTTACCTATCCTCACGTATCTGAATCCGCTGGATCGTGATACGCTTCGTAACATCTTGACC
GAGCCGAAGAACTCCATTATCAAGCAATACGTCAAATTGTTCGAGATGGATGGCATTAAGCTGACGTTCGATGAGAAAGT
CTATGAGTTTATCGTGGATAAGGCGCTTGAGTTTAAGCTGGGTGCCCGTGGGTTACGTTCAATCGTAGAAGCCGTGATGA
TGGACGCTATGTACAGTATGCCATCTCAAAAAGTAAAGGAACTCCATGTAACGTTGGAGTATGCGAAAGAGAAATTTGAA
AAATCGGACGTGAACCGTTTACAGGTCGCGTAA

Upstream 100 bases:

>100_bases
TGGCGACCGTGATTTCTGGATGACCGCGGAGGAAGCGAAAAAGTATGGCATGATCGACGATGTTTTAACACGTAAATAAC
AAAAACAACAATAAGAAACT

Downstream 100 bases:

>100_bases
ACGTAGGCGGTTTACTATAAATAATACGAAGTATGGCAAAGAAGGATCATTTAACAGAAGAGCTAAATCGGCACTTTGGC
TTCGGTACCTTTAAGGGGAA

Product: ATP-dependent protease ATP-binding subunit ClpX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MAKTTGDTCTFCGRSSRDVNLLINGISGCICDDCARQAYEIVKEQTGGKKTSFGLKQKDLPKPEDIKTFLDQYVIGQDDA
KRYLSVSVYNHYKRLLQKVTADDVEIEKSNIIMVGATGTGKTLLARTIAKLLHVPFAIVDATVLTEAGYVGEDIESILTR
LLQAADYDVEAAQRGIVFIDEIDKIARKSDNPSITRDVSGEGVQQGLLKLLEGSIVNVPPQGGRKHPEQKMIAVDTKNIL
FVCGGAFDGIEKKIAQRLNTRVVGYSASLDTATVDRNNLLKYITPTDLKSFGLIPEIIGRLPILTYLNPLDRDTLRNILT
EPKNSIIKQYVKLFEMDGIKLTFDEKVYEFIVDKALEFKLGARGLRSIVEAVMMDAMYSMPSQKVKELHVTLEYAKEKFE
KSDVNRLQVA

Sequences:

>Translated_410_residues
MAKTTGDTCTFCGRSSRDVNLLINGISGCICDDCARQAYEIVKEQTGGKKTSFGLKQKDLPKPEDIKTFLDQYVIGQDDA
KRYLSVSVYNHYKRLLQKVTADDVEIEKSNIIMVGATGTGKTLLARTIAKLLHVPFAIVDATVLTEAGYVGEDIESILTR
LLQAADYDVEAAQRGIVFIDEIDKIARKSDNPSITRDVSGEGVQQGLLKLLEGSIVNVPPQGGRKHPEQKMIAVDTKNIL
FVCGGAFDGIEKKIAQRLNTRVVGYSASLDTATVDRNNLLKYITPTDLKSFGLIPEIIGRLPILTYLNPLDRDTLRNILT
EPKNSIIKQYVKLFEMDGIKLTFDEKVYEFIVDKALEFKLGARGLRSIVEAVMMDAMYSMPSQKVKELHVTLEYAKEKFE
KSDVNRLQVA
>Mature_409_residues
AKTTGDTCTFCGRSSRDVNLLINGISGCICDDCARQAYEIVKEQTGGKKTSFGLKQKDLPKPEDIKTFLDQYVIGQDDAK
RYLSVSVYNHYKRLLQKVTADDVEIEKSNIIMVGATGTGKTLLARTIAKLLHVPFAIVDATVLTEAGYVGEDIESILTRL
LQAADYDVEAAQRGIVFIDEIDKIARKSDNPSITRDVSGEGVQQGLLKLLEGSIVNVPPQGGRKHPEQKMIAVDTKNILF
VCGGAFDGIEKKIAQRLNTRVVGYSASLDTATVDRNNLLKYITPTDLKSFGLIPEIIGRLPILTYLNPLDRDTLRNILTE
PKNSIIKQYVKLFEMDGIKLTFDEKVYEFIVDKALEFKLGARGLRSIVEAVMMDAMYSMPSQKVKELHVTLEYAKEKFEK
SDVNRLQVA

Specific function: ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP [H]

COG id: COG1219

COG function: function code O; ATP-dependent protease Clp, ATPase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpX chaperone family [H]

Homologues:

Organism=Homo sapiens, GI7242140, Length=326, Percent_Identity=46.9325153374233, Blast_Score=282, Evalue=4e-76,
Organism=Escherichia coli, GI1786642, Length=377, Percent_Identity=54.6419098143236, Blast_Score=424, Evalue=1e-120,
Organism=Escherichia coli, GI1790366, Length=103, Percent_Identity=43.6893203883495, Blast_Score=92, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI71982908, Length=304, Percent_Identity=41.7763157894737, Blast_Score=254, Evalue=5e-68,
Organism=Caenorhabditis elegans, GI71982905, Length=304, Percent_Identity=41.7763157894737, Blast_Score=254, Evalue=5e-68,
Organism=Caenorhabditis elegans, GI71988663, Length=399, Percent_Identity=38.0952380952381, Blast_Score=252, Evalue=2e-67,
Organism=Caenorhabditis elegans, GI71988660, Length=252, Percent_Identity=40.4761904761905, Blast_Score=175, Evalue=5e-44,
Organism=Saccharomyces cerevisiae, GI6319704, Length=414, Percent_Identity=37.43961352657, Blast_Score=259, Evalue=4e-70,
Organism=Drosophila melanogaster, GI24648289, Length=312, Percent_Identity=46.474358974359, Blast_Score=286, Evalue=3e-77,
Organism=Drosophila melanogaster, GI24648291, Length=312, Percent_Identity=46.474358974359, Blast_Score=285, Evalue=3e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR019489
- InterPro:   IPR004487
- InterPro:   IPR010603 [H]

Pfam domain/function: PF07724 AAA_2; PF10431 ClpB_D2-small; PF06689 zf-C4_ClpX [H]

EC number: NA

Molecular weight: Translated: 45581; Mature: 45450

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTTGDTCTFCGRSSRDVNLLINGISGCICDDCARQAYEIVKEQTGGKKTSFGLKQKDL
CCCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PKPEDIKTFLDQYVIGQDDAKRYLSVSVYNHYKRLLQKVTADDVEIEKSNIIMVGATGTG
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCC
KTLLARTIAKLLHVPFAIVDATVLTEAGYVGEDIESILTRLLQAADYDVEAAQRGIVFID
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCEEEHH
EIDKIARKSDNPSITRDVSGEGVQQGLLKLLEGSIVNVPPQGGRKHPEQKMIAVDTKNIL
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEECCCEE
FVCGGAFDGIEKKIAQRLNTRVVGYSASLDTATVDRNNLLKYITPTDLKSFGLIPEIIGR
EEECCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEEECCCCCHHCCCHHHHHHH
LPILTYLNPLDRDTLRNILTEPKNSIIKQYVKLFEMDGIKLTFDEKVYEFIVDKALEFKL
CCHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH
GARGLRSIVEAVMMDAMYSMPSQKVKELHVTLEYAKEKFEKSDVNRLQVA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AKTTGDTCTFCGRSSRDVNLLINGISGCICDDCARQAYEIVKEQTGGKKTSFGLKQKDL
CCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PKPEDIKTFLDQYVIGQDDAKRYLSVSVYNHYKRLLQKVTADDVEIEKSNIIMVGATGTG
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCC
KTLLARTIAKLLHVPFAIVDATVLTEAGYVGEDIESILTRLLQAADYDVEAAQRGIVFID
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCEEEHH
EIDKIARKSDNPSITRDVSGEGVQQGLLKLLEGSIVNVPPQGGRKHPEQKMIAVDTKNIL
HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEECCCEE
FVCGGAFDGIEKKIAQRLNTRVVGYSASLDTATVDRNNLLKYITPTDLKSFGLIPEIIGR
EEECCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEEECCCCCHHCCCHHHHHHH
LPILTYLNPLDRDTLRNILTEPKNSIIKQYVKLFEMDGIKLTFDEKVYEFIVDKALEFKL
CCHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH
GARGLRSIVEAVMMDAMYSMPSQKVKELHVTLEYAKEKFEKSDVNRLQVA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA