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The map label for this gene is 150008922

Identifier: 150008922

GI number: 150008922

Start: 2725112

End: 2725837

Strand: Reverse

Name: 150008922

Synonym: BDI_2318

Alternate gene names: NA

Gene position: 2725837-2725112 (Counterclockwise)

Preceding gene: 150008923

Following gene: 150008921

Centisome position: 56.65

GC content: 37.33

Gene sequence:

>726_bases
ATGAACACGTGTATAATGTATTTTGCGTTATACACGTGTTTTTCTATAAAATCTCTTCTAGCTAATCTGAAAATCGAATG
TTTTTGTGTATGTTTGCGTCAAATCTGCGGGAGTTATTTCTACATGATCTATATGAAAATATCCGATGAGGGGCTTTGGG
AACTGTGTCTGAAGGGAGATATGAGAGCTTTCCGTGAGCTGTATTGCCGATTTTACGCCTTATTGCGCAATTATGGTATC
AAGCTACTTCCTGACAAGAGCTTGGTGGAAGATTGCGTACAGGATATTTTTATCAAATTGATTCAAAACCACGAGACTTT
ATCTCCAACTGTAAATGTCAAAGGTTACTTACTCAAGACTTTAAGGCATAAGTTGTATGATACGATCGAGAAAAACAGGA
AGATGGAGGACATCTCTCTTTATGAGGATACTTTCCAAACAGATGAATTATTTTCTCGTATCTCACTGGATACGACGGAA
GCGGACGAACGGGTTAAACTCTTAATGAAGGCTTTGACAAAACTTTCCCCCCACCAGAGAGAGATTATTTATCTTTATTA
TGTAAATGGATTGGGACACGATGAGATTGCGGAGATCTTAGGTATAAATTATCAATCGAGTAAAAATTTATTATCCAGAA
CGCTTAGTAAGTTAAGAAGGTGGTTTTCCCTGGACGCTTTAATAATGGGGGGCATCCATTATGTTTTATTCCCTATGCTT
ACATAA

Upstream 100 bases:

>100_bases
CTATAAAAACTTGTTCAATGGCTTGATGGAGCATATCCGCCAGACGGGTATGATCCCTTGGCAAAGTAAGCGATATAAGT
AACCTTTTCGTATTATTTCA

Downstream 100 bases:

>100_bases
GCGAAAATATCTACCATATCTACAACTATGTCTTATATGCCCTATAAATAAGTATATTACATGGTGGTTGTAGATATAAA
AATATCTACAATTATCACTC

Product: RNA polymerase ECF-type sigma factor

Products: NA

Alternate protein names: RNA Polymerase ECF-Type Sigma Factor; ECF-Type Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma Factor Sigma-70 Family; Transcriptional Regulator LuxR Family; RNA Polymerase Sigma Factor RpoE; Sigma-70 Region 4 Subfamily; RNA Polymerase Sigma-24 Subunit Ecf Subfamily; RNA Polymerase Sigma; ECF-Type RNA Polymerase Sigma Factor

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MNTCIMYFALYTCFSIKSLLANLKIECFCVCLRQICGSYFYMIYMKISDEGLWELCLKGDMRAFRELYCRFYALLRNYGI
KLLPDKSLVEDCVQDIFIKLIQNHETLSPTVNVKGYLLKTLRHKLYDTIEKNRKMEDISLYEDTFQTDELFSRISLDTTE
ADERVKLLMKALTKLSPHQREIIYLYYVNGLGHDEIAEILGINYQSSKNLLSRTLSKLRRWFSLDALIMGGIHYVLFPML
T

Sequences:

>Translated_241_residues
MNTCIMYFALYTCFSIKSLLANLKIECFCVCLRQICGSYFYMIYMKISDEGLWELCLKGDMRAFRELYCRFYALLRNYGI
KLLPDKSLVEDCVQDIFIKLIQNHETLSPTVNVKGYLLKTLRHKLYDTIEKNRKMEDISLYEDTFQTDELFSRISLDTTE
ADERVKLLMKALTKLSPHQREIIYLYYVNGLGHDEIAEILGINYQSSKNLLSRTLSKLRRWFSLDALIMGGIHYVLFPML
T
>Mature_241_residues
MNTCIMYFALYTCFSIKSLLANLKIECFCVCLRQICGSYFYMIYMKISDEGLWELCLKGDMRAFRELYCRFYALLRNYGI
KLLPDKSLVEDCVQDIFIKLIQNHETLSPTVNVKGYLLKTLRHKLYDTIEKNRKMEDISLYEDTFQTDELFSRISLDTTE
ADERVKLLMKALTKLSPHQREIIYLYYVNGLGHDEIAEILGINYQSSKNLLSRTLSKLRRWFSLDALIMGGIHYVLFPML
T

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28358; Mature: 28358

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTCIMYFALYTCFSIKSLLANLKIECFCVCLRQICGSYFYMIYMKISDEGLWELCLKGD
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHH
MRAFRELYCRFYALLRNYGIKLLPDKSLVEDCVQDIFIKLIQNHETLSPTVNVKGYLLKT
HHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
LRHKLYDTIEKNRKMEDISLYEDTFQTDELFSRISLDTTEADERVKLLMKALTKLSPHQR
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
EIIYLYYVNGLGHDEIAEILGINYQSSKNLLSRTLSKLRRWFSLDALIMGGIHYVLFPML
EEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T
C
>Mature Secondary Structure
MNTCIMYFALYTCFSIKSLLANLKIECFCVCLRQICGSYFYMIYMKISDEGLWELCLKGD
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHH
MRAFRELYCRFYALLRNYGIKLLPDKSLVEDCVQDIFIKLIQNHETLSPTVNVKGYLLKT
HHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
LRHKLYDTIEKNRKMEDISLYEDTFQTDELFSRISLDTTEADERVKLLMKALTKLSPHQR
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC
EIIYLYYVNGLGHDEIAEILGINYQSSKNLLSRTLSKLRRWFSLDALIMGGIHYVLFPML
EEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA