Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150008921

Identifier: 150008921

GI number: 150008921

Start: 2723565

End: 2724644

Strand: Reverse

Name: 150008921

Synonym: BDI_2317

Alternate gene names: NA

Gene position: 2724644-2723565 (Counterclockwise)

Preceding gene: 150008922

Following gene: 150008920

Centisome position: 56.63

GC content: 41.02

Gene sequence:

>1080_bases
GTGAATAAGAAACGAGACATATTTGAAAAAGATTTATTCCGGCAAGCTGGAGAGGATTTATGGCGTAAAGTCCGAGAAGT
GGAACAATTGGATTCCAAGTTCGCTTTATCCTCATGGCAGAAGGTCGAGGAACGTTTGAAAGCTCCCCGTAAAACCTTTG
TTTTACGCATACGCTATCTAGCTTCTTCTGTGGCGGCGGCGGTCGTGTTACTCCTTGCCATAGGATGTTATTTCTGGATG
GTGGGGGATGATAAATCCTCCTTGCCATTGGCTTTGTTGGAAGAAAAGAGCATAGACTCTTTGCCGGACGATGAGATTGT
GCTGGTGGAAAATGGAAGCTGGGTACAGCTTAAAAATGGGGCTACAATTACGCATGATAATATAGGTAAACCAAGTGTAA
AAGACTCTCAGATAAAGAAGAAAGTATTAGCTACTAAGACTGGAAATTTGAATCAAATCATAGTACCGAAGGGCAAGCGG
GCAAATATTATATTTTCAGATGGTACCCAGATATATGTAAATGCCGATACCCGTGTGATTTATCCGGCCGTGTTTGCTAA
AGATAAACGAGAGATCTTAGTTACGGGAGAAGCCTATTTGGATGTTACCCCAGATTCTTCCCGCCCTTTTATCGTAAAGA
CAAATGCGTTTAATGTAAAGGTACTCGGTACCCAATTTAATGTTTGCGTCTATGGAGATGAGCCGAAGGCTTCCGTTGTA
TTAGTCGAAGGCCGGGTGGAGGTAGAGAATGATAAGCATGTTAAAGAGGTGCTAGCTCCTAACCAGATGATAGAGTTGGG
AAATAAAGGGGTATCTATTAAGGAAGTGGATGTGTTTGAGTATATCTGTTGGAAAGATAATCTGATGCAAGTGAACGATC
GTAAGGTTGGGGATGTCTTAAATAAATTAGCCCGATACTATGGGCGTACGATTGTGTTTGATAAAGAGATCGCGGAAATA
CCTCTTTCCGGTAAACTTGATTTGCGAGGAAGTTTGGAAGATGTTGTTGAGATTATTTGTCAATCTCTATTCTTGCGACA
AGAGACGGATAAAGAGAATAATATAATCATATTAAAATAG

Upstream 100 bases:

>100_bases
CGTGCTTTTCAAAACACAAGAATATGAAAAATTGTGTTTTTTTCCGCAAAAGTGAGTACCAAAATCAAATTGATCCGTAA
TAAGAATAAAAATGTAACCT

Downstream 100 bases:

>100_bases
ATTGCCTATGTAAAAGAACTATTTGGTGAAAAGACTTTGTGTTAAAAAGAAAAATTGACAAAAAGAACCGGAAGATACCG
TCATATCCACCGGTTCAAAG

Product: putative anti-sigma factor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MNKKRDIFEKDLFRQAGEDLWRKVREVEQLDSKFALSSWQKVEERLKAPRKTFVLRIRYLASSVAAAVVLLLAIGCYFWM
VGDDKSSLPLALLEEKSIDSLPDDEIVLVENGSWVQLKNGATITHDNIGKPSVKDSQIKKKVLATKTGNLNQIIVPKGKR
ANIIFSDGTQIYVNADTRVIYPAVFAKDKREILVTGEAYLDVTPDSSRPFIVKTNAFNVKVLGTQFNVCVYGDEPKASVV
LVEGRVEVENDKHVKEVLAPNQMIELGNKGVSIKEVDVFEYICWKDNLMQVNDRKVGDVLNKLARYYGRTIVFDKEIAEI
PLSGKLDLRGSLEDVVEIICQSLFLRQETDKENNIIILK

Sequences:

>Translated_359_residues
MNKKRDIFEKDLFRQAGEDLWRKVREVEQLDSKFALSSWQKVEERLKAPRKTFVLRIRYLASSVAAAVVLLLAIGCYFWM
VGDDKSSLPLALLEEKSIDSLPDDEIVLVENGSWVQLKNGATITHDNIGKPSVKDSQIKKKVLATKTGNLNQIIVPKGKR
ANIIFSDGTQIYVNADTRVIYPAVFAKDKREILVTGEAYLDVTPDSSRPFIVKTNAFNVKVLGTQFNVCVYGDEPKASVV
LVEGRVEVENDKHVKEVLAPNQMIELGNKGVSIKEVDVFEYICWKDNLMQVNDRKVGDVLNKLARYYGRTIVFDKEIAEI
PLSGKLDLRGSLEDVVEIICQSLFLRQETDKENNIIILK
>Mature_359_residues
MNKKRDIFEKDLFRQAGEDLWRKVREVEQLDSKFALSSWQKVEERLKAPRKTFVLRIRYLASSVAAAVVLLLAIGCYFWM
VGDDKSSLPLALLEEKSIDSLPDDEIVLVENGSWVQLKNGATITHDNIGKPSVKDSQIKKKVLATKTGNLNQIIVPKGKR
ANIIFSDGTQIYVNADTRVIYPAVFAKDKREILVTGEAYLDVTPDSSRPFIVKTNAFNVKVLGTQFNVCVYGDEPKASVV
LVEGRVEVENDKHVKEVLAPNQMIELGNKGVSIKEVDVFEYICWKDNLMQVNDRKVGDVLNKLARYYGRTIVFDKEIAEI
PLSGKLDLRGSLEDVVEIICQSLFLRQETDKENNIIILK

Specific function: Unknown

COG id: COG3712

COG function: function code PT; Fe2+-dicitrate sensor, membrane component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40577; Mature: 40577

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKRDIFEKDLFRQAGEDLWRKVREVEQLDSKFALSSWQKVEERLKAPRKTFVLRIRYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ASSVAAAVVLLLAIGCYFWMVGDDKSSLPLALLEEKSIDSLPDDEIVLVENGSWVQLKNG
HHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEECCC
ATITHDNIGKPSVKDSQIKKKVLATKTGNLNQIIVPKGKRANIIFSDGTQIYVNADTRVI
CEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCEEEEECCCEEE
YPAVFAKDKREILVTGEAYLDVTPDSSRPFIVKTNAFNVKVLGTQFNVCVYGDEPKASVV
EEEEECCCCCEEEEECCEEEEECCCCCCCEEEEECCEEEEEEEEEEEEEEECCCCCEEEE
LVEGRVEVENDKHVKEVLAPNQMIELGNKGVSIKEVDVFEYICWKDNLMQVNDRKVGDVL
EEECEEEECCCHHHHHHHCCCHHHHHCCCCCEEEEEHHHEEEECCCCEEEECCCHHHHHH
NKLARYYGRTIVFDKEIAEIPLSGKLDLRGSLEDVVEIICQSLFLRQETDKENNIIILK
HHHHHHHCCEEEEECHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEC
>Mature Secondary Structure
MNKKRDIFEKDLFRQAGEDLWRKVREVEQLDSKFALSSWQKVEERLKAPRKTFVLRIRYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ASSVAAAVVLLLAIGCYFWMVGDDKSSLPLALLEEKSIDSLPDDEIVLVENGSWVQLKNG
HHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEECCC
ATITHDNIGKPSVKDSQIKKKVLATKTGNLNQIIVPKGKRANIIFSDGTQIYVNADTRVI
CEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCEEEEECCCEEE
YPAVFAKDKREILVTGEAYLDVTPDSSRPFIVKTNAFNVKVLGTQFNVCVYGDEPKASVV
EEEEECCCCCEEEEECCEEEEECCCCCCCEEEEECCEEEEEEEEEEEEEEECCCCCEEEE
LVEGRVEVENDKHVKEVLAPNQMIELGNKGVSIKEVDVFEYICWKDNLMQVNDRKVGDVL
EEECEEEECCCHHHHHHHCCCHHHHHCCCCCEEEEEHHHEEEECCCCEEEECCCHHHHHH
NKLARYYGRTIVFDKEIAEIPLSGKLDLRGSLEDVVEIICQSLFLRQETDKENNIIILK
HHHHHHHCCEEEEECHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA