Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150008854

Identifier: 150008854

GI number: 150008854

Start: 2629785

End: 2631836

Strand: Reverse

Name: 150008854

Synonym: BDI_2244

Alternate gene names: NA

Gene position: 2631836-2629785 (Counterclockwise)

Preceding gene: 150008855

Following gene: 150008853

Centisome position: 54.7

GC content: 41.81

Gene sequence:

>2052_bases
ATGAAGACTGCCATTGTTCCTTTCTTGTTGCTTCTGAATGTTCTTGTCGCTGTAAATGCACAGACTAAGGATTCTGTTAT
CTTGGTGAAAGATAGTATTACGGTAAAATTGCCGGATGTCTACGTTACTTCCGAGCGTCCTTTGGTTACGGTTACGGACG
ATGCCTTATCTTTCGACGTGCCTAACTTGATCATGGCCAAACCGGTGAATACTGCATTTGATATTTTAGGAGAGATTCCC
GGATTGGTGAAAGAAGGGGACAACGTTAGTATCATCGGCGTCCCTGCTACGAACATTATTATTAACGGACGTAGAAGCTC
AATGTCATTGTCCCAGATTGTAGAGCTTCTGAAATCTACCTCGGCCAGCAAAGTAAAGAGTATAGAGCTTTTGTATAGCT
CTCCTCCAAAATATGGCGTAAAAGGAGGTAGTATAAATATCATTATGGAGAAGAAAGTGAATGAGGATTTAAGTGCCGAT
ATCTCTTTGACCGGAAAGCAAGCTTTCTACTTCTCGCCAACCGGATTAGTGAATTTATCCTACTCCAAAAAGAAATATAG
TCTGGATCTATCTTATTCCGCTAATTATAACCATTCCCGTTCAACCGAGGATATGAACGCCTATCCTATCGTGAAGGATC
GCCCTTATGAGATCCTGCAAGAAAATACGGCGGTAGGTCGTTCTATGAACCATACGATTGGGGCGAGTGCCAATTGGTTT
ATGGATAAGGGGCGTGAGGTGGATATTTCTTATTATGCCAAGATAACGGATTCTAATTCCAAACGATATTCGAACACTCT
ATTTGTGGGTATTGAGAATGCGGAAAGTAATAATAAGTTATCGGGCCCGAAGAATCTTCAAAATGTACGATTGAATTATG
CACATTCCAAGAACTTGAGCGCAGGGGTGGATTATACCTATTATAAGGATCGCAGGGATCAATATATGATCTCGGATTAT
CCCGATACGAAACAAGAGGTGGAGGCTACCTCCCGGCAAAATATCCATTTGGCGAATGTATTCGTCAACTACGAACGGGT
ATTTGGAAAAGGATGGAAAATTAACGCGGGCACGAATGTGCAGTTATCCTTTACGGATAATAGCTCCTTTACCTACCAAG
ATAAACAGGAGGATCTGTCAGCTACGTTTGCCCAAAAAGAAAAAGAGTATACGGCGGGATTGTATGCCGGTTTCTCTAAG
CGTTTTGGCAAGAAACTGGTGTTGAGCGCTTCTCTTTCGGCGGAGTATAATAAGGCGGTGATTGATTCGGCGGGCCGGAA
GTGGACCTTATGGTCTGGGGTAAATCTCTATCCACAATTGAACTTGAGTTATACGATCGATCCATCGAATATGCTTCAAG
TCAATTTTTCCAGCGATAAGAAGTATCCGGCGTATTGGGCCATGAGCTCGAATGTTTCTTATTTGAATGTGTATAGTCAG
GTACGGGGAAATCCTTATTTGGAACCGGAACGTATTTATATGGCTAGGGCTAATTATATCTTGAAAAAGAAATATGTTTT
TGGACTATTTGCCAATCATCATGTGAATTATATTCGCCAATTGTATTATCAAGATACGAAAGCGTTGAGAGCCTATTACC
AATCGGTTAATTTCGATAAGCATAATACTTTCGGGGCGATGGCAGTTATCCCGTTTCGGATCGGTGGGGTGGTTAGCTCA
CGGTTCGTGGCATCGGGCTTCTTAATTCAAGATGAGGGAGTGTTTATCGATATTTCGTTTGATCGGAAAAAGTTATTCGG
GCAGTTGATGTTGTTCAATACGTTTACTTTATCAAAGAAGAAGAACTTATCGCTGGAAGTGAATGCTCGCTATAGTGCGC
CTTCGATACAAGGTATCTATGATGTGGATGGTAATTATAATGTATCGGCAGGGCTTGTCTGGAATCCGATACCGAAAAAG
TTAAGTGTAATGCTGCGAGGTGAGGATTTGTTAAAGGGCTTACGTGCGAAAACGCATATTGATTATCCCAGCCAGAAGAG
TGATATGACGATCTATTCGGATACTCGTTCAGTATCGCTCACTTTAAAGTAA

Upstream 100 bases:

>100_bases
TTGAATATGTATACGATTTGTTCGTAAATATTCGATAGTTTCGTTGCTTATCTCCTTTTTTCTTTTTAATTTGGCGGATT
ATAAACATAATCTTGATATT

Downstream 100 bases:

>100_bases
ACGCAGCAAGAAAAAGCAAGGTTGATGATAATACAGCAAAAATGCAGTCTATTAAGCAGTTAGGTGTTTAACTCATAATA
CTGCATAAGCTGAAAAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; Nb-Dependent Receptor Plug; NB Dependent Receptor; Nb-Dependent Outer Membrane Receptor; Protein Containing nB-Dependent Receptor Plug Domain

Number of amino acids: Translated: 683; Mature: 683

Protein sequence:

>683_residues
MKTAIVPFLLLLNVLVAVNAQTKDSVILVKDSITVKLPDVYVTSERPLVTVTDDALSFDVPNLIMAKPVNTAFDILGEIP
GLVKEGDNVSIIGVPATNIIINGRRSSMSLSQIVELLKSTSASKVKSIELLYSSPPKYGVKGGSINIIMEKKVNEDLSAD
ISLTGKQAFYFSPTGLVNLSYSKKKYSLDLSYSANYNHSRSTEDMNAYPIVKDRPYEILQENTAVGRSMNHTIGASANWF
MDKGREVDISYYAKITDSNSKRYSNTLFVGIENAESNNKLSGPKNLQNVRLNYAHSKNLSAGVDYTYYKDRRDQYMISDY
PDTKQEVEATSRQNIHLANVFVNYERVFGKGWKINAGTNVQLSFTDNSSFTYQDKQEDLSATFAQKEKEYTAGLYAGFSK
RFGKKLVLSASLSAEYNKAVIDSAGRKWTLWSGVNLYPQLNLSYTIDPSNMLQVNFSSDKKYPAYWAMSSNVSYLNVYSQ
VRGNPYLEPERIYMARANYILKKKYVFGLFANHHVNYIRQLYYQDTKALRAYYQSVNFDKHNTFGAMAVIPFRIGGVVSS
RFVASGFLIQDEGVFIDISFDRKKLFGQLMLFNTFTLSKKKNLSLEVNARYSAPSIQGIYDVDGNYNVSAGLVWNPIPKK
LSVMLRGEDLLKGLRAKTHIDYPSQKSDMTIYSDTRSVSLTLK

Sequences:

>Translated_683_residues
MKTAIVPFLLLLNVLVAVNAQTKDSVILVKDSITVKLPDVYVTSERPLVTVTDDALSFDVPNLIMAKPVNTAFDILGEIP
GLVKEGDNVSIIGVPATNIIINGRRSSMSLSQIVELLKSTSASKVKSIELLYSSPPKYGVKGGSINIIMEKKVNEDLSAD
ISLTGKQAFYFSPTGLVNLSYSKKKYSLDLSYSANYNHSRSTEDMNAYPIVKDRPYEILQENTAVGRSMNHTIGASANWF
MDKGREVDISYYAKITDSNSKRYSNTLFVGIENAESNNKLSGPKNLQNVRLNYAHSKNLSAGVDYTYYKDRRDQYMISDY
PDTKQEVEATSRQNIHLANVFVNYERVFGKGWKINAGTNVQLSFTDNSSFTYQDKQEDLSATFAQKEKEYTAGLYAGFSK
RFGKKLVLSASLSAEYNKAVIDSAGRKWTLWSGVNLYPQLNLSYTIDPSNMLQVNFSSDKKYPAYWAMSSNVSYLNVYSQ
VRGNPYLEPERIYMARANYILKKKYVFGLFANHHVNYIRQLYYQDTKALRAYYQSVNFDKHNTFGAMAVIPFRIGGVVSS
RFVASGFLIQDEGVFIDISFDRKKLFGQLMLFNTFTLSKKKNLSLEVNARYSAPSIQGIYDVDGNYNVSAGLVWNPIPKK
LSVMLRGEDLLKGLRAKTHIDYPSQKSDMTIYSDTRSVSLTLK
>Mature_683_residues
MKTAIVPFLLLLNVLVAVNAQTKDSVILVKDSITVKLPDVYVTSERPLVTVTDDALSFDVPNLIMAKPVNTAFDILGEIP
GLVKEGDNVSIIGVPATNIIINGRRSSMSLSQIVELLKSTSASKVKSIELLYSSPPKYGVKGGSINIIMEKKVNEDLSAD
ISLTGKQAFYFSPTGLVNLSYSKKKYSLDLSYSANYNHSRSTEDMNAYPIVKDRPYEILQENTAVGRSMNHTIGASANWF
MDKGREVDISYYAKITDSNSKRYSNTLFVGIENAESNNKLSGPKNLQNVRLNYAHSKNLSAGVDYTYYKDRRDQYMISDY
PDTKQEVEATSRQNIHLANVFVNYERVFGKGWKINAGTNVQLSFTDNSSFTYQDKQEDLSATFAQKEKEYTAGLYAGFSK
RFGKKLVLSASLSAEYNKAVIDSAGRKWTLWSGVNLYPQLNLSYTIDPSNMLQVNFSSDKKYPAYWAMSSNVSYLNVYSQ
VRGNPYLEPERIYMARANYILKKKYVFGLFANHHVNYIRQLYYQDTKALRAYYQSVNFDKHNTFGAMAVIPFRIGGVVSS
RFVASGFLIQDEGVFIDISFDRKKLFGQLMLFNTFTLSKKKNLSLEVNARYSAPSIQGIYDVDGNYNVSAGLVWNPIPKK
LSVMLRGEDLLKGLRAKTHIDYPSQKSDMTIYSDTRSVSLTLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76804; Mature: 76804

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAIVPFLLLLNVLVAVNAQTKDSVILVKDSITVKLPDVYVTSERPLVTVTDDALSFDV
CCCHHHHHHHHHHHHHEECCCCCCCEEEEECCEEEEECCEEEECCCCEEEEECCCEECCC
PNLIMAKPVNTAFDILGEIPGLVKEGDNVSIIGVPATNIIINGRRSSMSLSQIVELLKST
CCEEEECCCCHHHHHHHHCCHHHCCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHCC
SASKVKSIELLYSSPPKYGVKGGSINIIMEKKVNEDLSADISLTGKQAFYFSPTGLVNLS
CCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCEEEEECCCCEEEEE
YSKKKYSLDLSYSANYNHSRSTEDMNAYPIVKDRPYEILQENTAVGRSMNHTIGASANWF
ECCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCEE
MDKGREVDISYYAKITDSNSKRYSNTLFVGIENAESNNKLSGPKNLQNVRLNYAHSKNLS
CCCCCEEEEEEEEEEECCCCCEECCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCC
AGVDYTYYKDRRDQYMISDYPDTKQEVEATSRQNIHLANVFVNYERVFGKGWKINAGTNV
CCCCEEEECCCCCCEEECCCCCCHHHHHHHCCCCEEEEEEEEEEHHHHCCCEEECCCCEE
QLSFTDNSSFTYQDKQEDLSATFAQKEKEYTAGLYAGFSKRFGKKLVLSASLSAEYNKAV
EEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHH
IDSAGRKWTLWSGVNLYPQLNLSYTIDPSNMLQVNFSSDKKYPAYWAMSSNVSYLNVYSQ
HHCCCCEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCEEEEEHHH
VRGNPYLEPERIYMARANYILKKKYVFGLFANHHVNYIRQLYYQDTKALRAYYQSVNFDK
HCCCCCCCHHHEEEEECCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HNTFGAMAVIPFRIGGVVSSRFVASGFLIQDEGVFIDISFDRKKLFGQLMLFNTFTLSKK
CCCCEEEEEEEEEECCHHHHHHHHCCEEEECCCEEEEEECCHHHHHHEEEEEEEEEECCC
KNLSLEVNARYSAPSIQGIYDVDGNYNVSAGLVWNPIPKKLSVMLRGEDLLKGLRAKTHI
CCCEEEEEEEECCCCCCEEEECCCCEEEEECEEECCCCCEEEEEECCHHHHHHHHHHEEC
DYPSQKSDMTIYSDTRSVSLTLK
CCCCCCCCEEEEECCCEEEEEEC
>Mature Secondary Structure
MKTAIVPFLLLLNVLVAVNAQTKDSVILVKDSITVKLPDVYVTSERPLVTVTDDALSFDV
CCCHHHHHHHHHHHHHEECCCCCCCEEEEECCEEEEECCEEEECCCCEEEEECCCEECCC
PNLIMAKPVNTAFDILGEIPGLVKEGDNVSIIGVPATNIIINGRRSSMSLSQIVELLKST
CCEEEECCCCHHHHHHHHCCHHHCCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHCC
SASKVKSIELLYSSPPKYGVKGGSINIIMEKKVNEDLSADISLTGKQAFYFSPTGLVNLS
CCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCEEEEECCCCEEEEE
YSKKKYSLDLSYSANYNHSRSTEDMNAYPIVKDRPYEILQENTAVGRSMNHTIGASANWF
ECCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCEE
MDKGREVDISYYAKITDSNSKRYSNTLFVGIENAESNNKLSGPKNLQNVRLNYAHSKNLS
CCCCCEEEEEEEEEEECCCCCEECCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCC
AGVDYTYYKDRRDQYMISDYPDTKQEVEATSRQNIHLANVFVNYERVFGKGWKINAGTNV
CCCCEEEECCCCCCEEECCCCCCHHHHHHHCCCCEEEEEEEEEEHHHHCCCEEECCCCEE
QLSFTDNSSFTYQDKQEDLSATFAQKEKEYTAGLYAGFSKRFGKKLVLSASLSAEYNKAV
EEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHH
IDSAGRKWTLWSGVNLYPQLNLSYTIDPSNMLQVNFSSDKKYPAYWAMSSNVSYLNVYSQ
HHCCCCEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCEEEEEHHH
VRGNPYLEPERIYMARANYILKKKYVFGLFANHHVNYIRQLYYQDTKALRAYYQSVNFDK
HCCCCCCCHHHEEEEECCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HNTFGAMAVIPFRIGGVVSSRFVASGFLIQDEGVFIDISFDRKKLFGQLMLFNTFTLSKK
CCCCEEEEEEEEEECCHHHHHHHHCCEEEECCCEEEEEECCHHHHHHEEEEEEEEEECCC
KNLSLEVNARYSAPSIQGIYDVDGNYNVSAGLVWNPIPKKLSVMLRGEDLLKGLRAKTHI
CCCEEEEEEEECCCCCCEEEECCCCEEEEECEEECCCCCEEEEEECCHHHHHHHHHHEEC
DYPSQKSDMTIYSDTRSVSLTLK
CCCCCCCCEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA