| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008839
Identifier: 150008839
GI number: 150008839
Start: 2617793
End: 2619007
Strand: Reverse
Name: 150008839
Synonym: BDI_2229
Alternate gene names: NA
Gene position: 2619007-2617793 (Counterclockwise)
Preceding gene: 150008840
Following gene: 150008837
Centisome position: 54.43
GC content: 56.54
Gene sequence:
>1215_bases ATGGCAACAATCAAAACCAAATTCAGGTCCTCGTCCGTGGAAGGCAGGGAGGGGACGCTCTATTTCCAGGTCATCCACGG AAGGGTGGCGCGCCAGATAAACACCGGTTACAGGCTGTTCCCTTCGGAATGGGACGGACGCACGTCGGAAATCATACTGC CGGTATCCGGTGATGCCAGAAGAAGCCTCCTGCTCGCGTTAAAGGAGCGGATGGAAAAAGACATCCGCCGTCTGGAAAGT ATCATCGCCGGACTGGAACGTTCCGGCGGTACCTATCCCGCCGGCAGGGTTGTCGAACTTTTTCACAACCCGCCCCCTGA GGACAGCCATAATTTCATGGCCTTCGGAAAGAGGCTCGTGGAGGAACTGGAGCGTGTCGGCAAGAAGCGCACCGCCGAGA GGTACACCACCGTACTGAACAGCTTCACGCACTTCCGGGGCAGGGACGGCGACATCCCGCTGGAGGATATCGGCTCCACC CTCATGCTGGAATACGAGGCATGGCTGAAGGACAAGGGGATATGTCCGAACAGCACCTCCTATTACATGCGGAACCTGCG TGCCGTCTACAACCGTGCGGTGGACAGGGAACTGACGGTACAGCGCAGCCCTTTCAAGCATGTCTACACCGGAATAGACA AGACCGTAAAACGTGCTGTTCCATTGAAAGCGGTCCGCATGATACGTGACCTGGACCTGCGCCTTTCCCCGGGCATGGAA TACGCCAGGGACATGTTCATGCTGAGCTTTTATACTCGGGGCATGTCGTTCGTCGACATCGCCTACCTGAAAAAGGCAGA TCTGAAGAGCGGCGTGCTGACCTACCGCAGGCGGAAGACCGGCCGGCGTCTGTCCATTAAATGGGAGAAGCCCATGCAGG AGATCCTGGACAGGTATGGCCACAATGACAGCCCCTACCTTTTTCCGGTCATCAGGGATACGGCCAAGGATGCCGTGCGG CAGTACAGGAGCGCAGCGCATTTCATCAACGGAAAACTCAAGGAACTCGGGAAACGGCTCGGGCTCGGCATGCCGCTCAC CATGTATGTAGCGCGCCATGCATGGGCGAGTATTGCCAGAAGCAAGAATGTGCCGCTGGCAACCATCAGCGAGGCGATGG GACATGATTCGGAAAACACGACCAGAATCTACCTCGCCTCGCTGGACACCTCACAAGTGGACAAGGCAAACGACATCATA CTCAAATCCTTATAA
Upstream 100 bases:
>100_bases GAAATGGCGGCCTACAAGGACAGTCTGGCGCACCGGCTGTTCAGGGAGGCACAGGAAATCAGGAAGCAACTGGACAATCC TAATTCAAAATGACTGCACT
Downstream 100 bases:
>100_bases CGGGGACGGATGCGGCACGTAGAATAACGGACAAAGGCTGTGCCGTTCCTGCTTCTCTTTTTAAGAGAAATATTACACAT TGCAAAGATAATCAAAATAT
Product: transposase
Products: NA
Alternate protein names: Transposase; Tyrosine Type Site-Specific Recombinase; Tyrosine Site-Specific Recombinase; Integrase Family Protein; Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Site-Specific Recombinase IntIA; Integrase/Site-Specific Recombinase; Recombinase/Integrase; Bacteriophage Integrase; LOW QUALITY PROTEIN Tyrosine Recombinase; Integrase/Transposase
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MATIKTKFRSSSVEGREGTLYFQVIHGRVARQINTGYRLFPSEWDGRTSEIILPVSGDARRSLLLALKERMEKDIRRLES IIAGLERSGGTYPAGRVVELFHNPPPEDSHNFMAFGKRLVEELERVGKKRTAERYTTVLNSFTHFRGRDGDIPLEDIGST LMLEYEAWLKDKGICPNSTSYYMRNLRAVYNRAVDRELTVQRSPFKHVYTGIDKTVKRAVPLKAVRMIRDLDLRLSPGME YARDMFMLSFYTRGMSFVDIAYLKKADLKSGVLTYRRRKTGRRLSIKWEKPMQEILDRYGHNDSPYLFPVIRDTAKDAVR QYRSAAHFINGKLKELGKRLGLGMPLTMYVARHAWASIARSKNVPLATISEAMGHDSENTTRIYLASLDTSQVDKANDII LKSL
Sequences:
>Translated_404_residues MATIKTKFRSSSVEGREGTLYFQVIHGRVARQINTGYRLFPSEWDGRTSEIILPVSGDARRSLLLALKERMEKDIRRLES IIAGLERSGGTYPAGRVVELFHNPPPEDSHNFMAFGKRLVEELERVGKKRTAERYTTVLNSFTHFRGRDGDIPLEDIGST LMLEYEAWLKDKGICPNSTSYYMRNLRAVYNRAVDRELTVQRSPFKHVYTGIDKTVKRAVPLKAVRMIRDLDLRLSPGME YARDMFMLSFYTRGMSFVDIAYLKKADLKSGVLTYRRRKTGRRLSIKWEKPMQEILDRYGHNDSPYLFPVIRDTAKDAVR QYRSAAHFINGKLKELGKRLGLGMPLTMYVARHAWASIARSKNVPLATISEAMGHDSENTTRIYLASLDTSQVDKANDII LKSL >Mature_403_residues ATIKTKFRSSSVEGREGTLYFQVIHGRVARQINTGYRLFPSEWDGRTSEIILPVSGDARRSLLLALKERMEKDIRRLESI IAGLERSGGTYPAGRVVELFHNPPPEDSHNFMAFGKRLVEELERVGKKRTAERYTTVLNSFTHFRGRDGDIPLEDIGSTL MLEYEAWLKDKGICPNSTSYYMRNLRAVYNRAVDRELTVQRSPFKHVYTGIDKTVKRAVPLKAVRMIRDLDLRLSPGMEY ARDMFMLSFYTRGMSFVDIAYLKKADLKSGVLTYRRRKTGRRLSIKWEKPMQEILDRYGHNDSPYLFPVIRDTAKDAVRQ YRSAAHFINGKLKELGKRLGLGMPLTMYVARHAWASIARSKNVPLATISEAMGHDSENTTRIYLASLDTSQVDKANDIIL KSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46313; Mature: 46182
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIKTKFRSSSVEGREGTLYFQVIHGRVARQINTGYRLFPSEWDGRTSEIILPVSGDAR CCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCEECCCCCCCCCCEEEEECCCCHH RSLLLALKERMEKDIRRLESIIAGLERSGGTYPAGRVVELFHNPPPEDSHNFMAFGKRLV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH EELERVGKKRTAERYTTVLNSFTHFRGRDGDIPLEDIGSTLMLEYEAWLKDKGICPNSTS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEHHHHHHCCCCCCCCCHH YYMRNLRAVYNRAVDRELTVQRSPFKHVYTGIDKTVKRAVPLKAVRMIRDLDLRLSPGME HHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHH YARDMFMLSFYTRGMSFVDIAYLKKADLKSGVLTYRRRKTGRRLSIKWEKPMQEILDRYG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHC HNDSPYLFPVIRDTAKDAVRQYRSAAHFINGKLKELGKRLGLGMPLTMYVARHAWASIAR CCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH SKNVPLATISEAMGHDSENTTRIYLASLDTSQVDKANDIILKSL CCCCCHHHHHHHHCCCCCCCEEEEEEECCCHHCCCCCCHHCCCC >Mature Secondary Structure ATIKTKFRSSSVEGREGTLYFQVIHGRVARQINTGYRLFPSEWDGRTSEIILPVSGDAR CCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCEECCCCCCCCCCEEEEECCCCHH RSLLLALKERMEKDIRRLESIIAGLERSGGTYPAGRVVELFHNPPPEDSHNFMAFGKRLV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH EELERVGKKRTAERYTTVLNSFTHFRGRDGDIPLEDIGSTLMLEYEAWLKDKGICPNSTS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEHHHHHHCCCCCCCCCHH YYMRNLRAVYNRAVDRELTVQRSPFKHVYTGIDKTVKRAVPLKAVRMIRDLDLRLSPGME HHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHH YARDMFMLSFYTRGMSFVDIAYLKKADLKSGVLTYRRRKTGRRLSIKWEKPMQEILDRYG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHC HNDSPYLFPVIRDTAKDAVRQYRSAAHFINGKLKELGKRLGLGMPLTMYVARHAWASIAR CCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH SKNVPLATISEAMGHDSENTTRIYLASLDTSQVDKANDIILKSL CCCCCHHHHHHHHCCCCCCCEEEEEEECCCHHCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA