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The map label for this gene is yfcH [C]

Identifier: 150008783

GI number: 150008783

Start: 2559254

End: 2560549

Strand: Reverse

Name: yfcH [C]

Synonym: BDI_2173

Alternate gene names: 150008783

Gene position: 2560549-2559254 (Counterclockwise)

Preceding gene: 150008791

Following gene: 150008780

Centisome position: 53.22

GC content: 45.29

Gene sequence:

>1296_bases
ATGAAAATAGCGATTAGCGGTGCGAGTGGATACATAGGACAGCATCTTACTCTTTTTTTCACGGAAAAGGGTGATGAGGT
GGTTCCTTTAGGAAGGAACCTGTTCAAGGAGGAGAATTTCGATGAGCTATGCCATCGTGTGGAATCGTGTGATGTGGTCA
TTAATCTGGCGGGTGCTTCCATTAATAAGCGCTGGACAAAAGCGTATAAGCAAGAATTATATGATAGTAGAATCCGGACA
ACCCATCAGTTGGTAAATGCCATAAATACCCGGGATATTCTCCCAAAGTTGTTTATATCAACTTCTGCCGTAGGCTATTA
TCCCACATCCGGAGAATATGACGAATATAACAATCGGCAAGGTGAGGATTTCTTGGCCCGGTTATGTGGCGCATGGGAAA
AGGAAGCGCGGGCGTGTTTGCCGGATGTGCGGCTTGTGATTGCCCGGTTCGGGGTCGTACTCTCGGAGGATGGCGGGGCA
TTGAGACAGATGCTTCATTTGCAACGTCTCTCCCGGATAGGTGTGGTGATAGGCGATGGCCAACAGAGTTTTCCGTGGAT
CAGCGTGCATGATTTGTGCCGCTCTTTTGATTTTATGATACAAAATAGTACGTTGAGAGGAGTGGTCAATCTTGTCTCTC
CGCAATGCATCACCCAAAAGCAACTGGCATATGCGCTGGCGAGAGCGGATGGAACCCGTTGGGTTATGCCTTTGCCTACA
TTCATTTTCCGACTGATGTTCGGTGAAGGAGCCTCGTTTGTAACGGAGGGGCAAACGGTTCATCCTACGAAATTATTGGA
GTCTGGTTTTACATATGATTATCCGACAATAGAAAAGCTTATGAATATAACAGATCATCGTACCGTGCAGGCACTGGATG
TCCGCCGGTATATGGGACGGTGGTATGAGATCGCCCGTTACGAGAATCATTTCGAGAAAGGTATGACGGATGTTACGGCT
ACTTATACATTGCGATCGGATGGAAGAATCCGTGTGGAAAACGAGGGGTTTAAAGATGGAATCCATAAAAAAGCAGTAGG
CCGGGCGAAACAGCCAGAACCAGAAAATAGCCCGGGTAAATTGAAAGTCGCTTTCTTTTTATGGTTCTATTCAGATTATT
ATATCTTCGAACTCGACGAACATTATCAGTATGTTGTGGTAGGCAGCAGTTCTGACAAGTATCTCTGGATTTTGAGTCGT
GATAAATCCTTGCCGGAAGCGGTTATGGAAGATTTGCTTGGCAAGATAATGAAACGAGGATATGATATCTCTAAATTGGT
TTATAACAGAATTTGA

Upstream 100 bases:

>100_bases
ATAGTTGTCTGCCATGATCCATTATTAGTTGAAAGAACAAATATAGTGTTTAACTAAATAGGTTGTGCGCTTGTTTATAA
GGTAAAGATCATTTAGAATC

Downstream 100 bases:

>100_bases
TTACATAGTTTCCAAAATTAGTATTGATAGTAATCTAGGCTACTATCAATACTAATTGCTATTACCCTGTCATTTATTTC
AATTGTTTTCCATCGGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MKIAISGASGYIGQHLTLFFTEKGDEVVPLGRNLFKEENFDELCHRVESCDVVINLAGASINKRWTKAYKQELYDSRIRT
THQLVNAINTRDILPKLFISTSAVGYYPTSGEYDEYNNRQGEDFLARLCGAWEKEARACLPDVRLVIARFGVVLSEDGGA
LRQMLHLQRLSRIGVVIGDGQQSFPWISVHDLCRSFDFMIQNSTLRGVVNLVSPQCITQKQLAYALARADGTRWVMPLPT
FIFRLMFGEGASFVTEGQTVHPTKLLESGFTYDYPTIEKLMNITDHRTVQALDVRRYMGRWYEIARYENHFEKGMTDVTA
TYTLRSDGRIRVENEGFKDGIHKKAVGRAKQPEPENSPGKLKVAFFLWFYSDYYIFELDEHYQYVVVGSSSDKYLWILSR
DKSLPEAVMEDLLGKIMKRGYDISKLVYNRI

Sequences:

>Translated_431_residues
MKIAISGASGYIGQHLTLFFTEKGDEVVPLGRNLFKEENFDELCHRVESCDVVINLAGASINKRWTKAYKQELYDSRIRT
THQLVNAINTRDILPKLFISTSAVGYYPTSGEYDEYNNRQGEDFLARLCGAWEKEARACLPDVRLVIARFGVVLSEDGGA
LRQMLHLQRLSRIGVVIGDGQQSFPWISVHDLCRSFDFMIQNSTLRGVVNLVSPQCITQKQLAYALARADGTRWVMPLPT
FIFRLMFGEGASFVTEGQTVHPTKLLESGFTYDYPTIEKLMNITDHRTVQALDVRRYMGRWYEIARYENHFEKGMTDVTA
TYTLRSDGRIRVENEGFKDGIHKKAVGRAKQPEPENSPGKLKVAFFLWFYSDYYIFELDEHYQYVVVGSSSDKYLWILSR
DKSLPEAVMEDLLGKIMKRGYDISKLVYNRI
>Mature_431_residues
MKIAISGASGYIGQHLTLFFTEKGDEVVPLGRNLFKEENFDELCHRVESCDVVINLAGASINKRWTKAYKQELYDSRIRT
THQLVNAINTRDILPKLFISTSAVGYYPTSGEYDEYNNRQGEDFLARLCGAWEKEARACLPDVRLVIARFGVVLSEDGGA
LRQMLHLQRLSRIGVVIGDGQQSFPWISVHDLCRSFDFMIQNSTLRGVVNLVSPQCITQKQLAYALARADGTRWVMPLPT
FIFRLMFGEGASFVTEGQTVHPTKLLESGFTYDYPTIEKLMNITDHRTVQALDVRRYMGRWYEIARYENHFEKGMTDVTA
TYTLRSDGRIRVENEGFKDGIHKKAVGRAKQPEPENSPGKLKVAFFLWFYSDYYIFELDEHYQYVVVGSSSDKYLWILSR
DKSLPEAVMEDLLGKIMKRGYDISKLVYNRI

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=285, Percent_Identity=35.0877192982456, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI4502163, Length=146, Percent_Identity=31.5068493150685, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1788642, Length=296, Percent_Identity=35.8108108108108, Blast_Score=155, Evalue=6e-39,
Organism=Escherichia coli, GI1790592, Length=143, Percent_Identity=38.4615384615385, Blast_Score=109, Evalue=3e-25,
Organism=Drosophila melanogaster, GI28573846, Length=285, Percent_Identity=31.5789473684211, Blast_Score=141, Evalue=7e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 49442; Mature: 49442

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAISGASGYIGQHLTLFFTEKGDEVVPLGRNLFKEENFDELCHRVESCDVVINLAGAS
CEEEEECCCCCCCCCEEEEEECCCCEEECCCHHHHCCCCHHHHHHHHCCCCEEEEECCCC
INKRWTKAYKQELYDSRIRTTHQLVNAINTRDILPKLFISTSAVGYYPTSGEYDEYNNRQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCC
GEDFLARLCGAWEKEARACLPDVRLVIARFGVVLSEDGGALRQMLHLQRLSRIGVVIGDG
CHHHHHHHHCCHHHHHHHHCHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHCCEEEECC
QQSFPWISVHDLCRSFDFMIQNSTLRGVVNLVSPQCITQKQLAYALARADGTRWVMPLPT
CCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEHHHH
FIFRLMFGEGASFVTEGQTVHPTKLLESGFTYDYPTIEKLMNITDHRTVQALDVRRYMGR
HHHHHHHCCCCCEEECCCCCCHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH
WYEIARYENHFEKGMTDVTATYTLRSDGRIRVENEGFKDGIHKKAVGRAKQPEPENSPGK
HHHHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCC
LKVAFFLWFYSDYYIFELDEHYQYVVVGSSSDKYLWILSRDKSLPEAVMEDLLGKIMKRG
EEEEEEEEECCCEEEEEECCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
YDISKLVYNRI
CCHHHHHHHCC
>Mature Secondary Structure
MKIAISGASGYIGQHLTLFFTEKGDEVVPLGRNLFKEENFDELCHRVESCDVVINLAGAS
CEEEEECCCCCCCCCEEEEEECCCCEEECCCHHHHCCCCHHHHHHHHCCCCEEEEECCCC
INKRWTKAYKQELYDSRIRTTHQLVNAINTRDILPKLFISTSAVGYYPTSGEYDEYNNRQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCC
GEDFLARLCGAWEKEARACLPDVRLVIARFGVVLSEDGGALRQMLHLQRLSRIGVVIGDG
CHHHHHHHHCCHHHHHHHHCHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHCCEEEECC
QQSFPWISVHDLCRSFDFMIQNSTLRGVVNLVSPQCITQKQLAYALARADGTRWVMPLPT
CCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEHHHH
FIFRLMFGEGASFVTEGQTVHPTKLLESGFTYDYPTIEKLMNITDHRTVQALDVRRYMGR
HHHHHHHCCCCCEEECCCCCCHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH
WYEIARYENHFEKGMTDVTATYTLRSDGRIRVENEGFKDGIHKKAVGRAKQPEPENSPGK
HHHHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCC
LKVAFFLWFYSDYYIFELDEHYQYVVVGSSSDKYLWILSRDKSLPEAVMEDLLGKIMKRG
EEEEEEEEECCCEEEEEECCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
YDISKLVYNRI
CCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]