| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008755
Identifier: 150008755
GI number: 150008755
Start: 2530033
End: 2531175
Strand: Direct
Name: 150008755
Synonym: BDI_2145
Alternate gene names: NA
Gene position: 2530033-2531175 (Clockwise)
Preceding gene: 150008754
Following gene: 150008756
Centisome position: 52.58
GC content: 36.92
Gene sequence:
>1143_bases ATGAAACAGATTCAAGGTACTTCATACAATATTGAAGATGATATAGTTGGACGCATAACCTTTGGAAAAAGGAATTTGTT TGGTCGTTCCAATGATATACTGGTTTGTAAAGATAGCGACAAGCCTGCTTTCGGTTATTTGGCTACAATCACGGAGAAAA CAACTTTCTCTGCCAAAGACAAGCCTTATTGCGTTGTTAATAGTGTTGAAAATTTCAACGAGGGAGATGTGGCTGTTATC AATAAAAAAGGTGAAATCATTTTTGTGTACGAGATAAATTCTAATCACAATGCGCTGATGGCAACAGAACGCTGTAACCA TCGTTGTATCATGTGCCCACAACCACCTATCTTACAAGAGAAAGATAAAACTCCTTTCAACTTACAACTCATATCACTGT TTGACAAAAACACACAAGAGATTGGTATAACAGGGGGAGAGCCAACTCTTATTGGAGATAATCTTTTTACATTGATACGC CATATCAAAAAGGAATTACCTCAAACAGCTATCAGCATTCTGTCGAATGGAGTAAAATTTGCAGACAAAGAATTTGCAAT GAAATTAGCCAAGTGCAGACATCAAGATTTGCAAATAGACATTCCTTTATTCTCAGATATAGCCGAAGAACACAATCGTA TTGTAGGCGCAAAAACATTTTATAAGACTGTTCAAGGACTATATAATTTGGCATTATTCCGTCAGCGCATCGGATTGCGT ATAGTAGTCCATAAGCAAACTTATAAGCGGCTTCCTCAATTTGCAGATTTTATCTACCATAATTTTCCTTTTGTCGCCCA AGTAGCTTTTATGCAAATGGAAACAACTGGATTGGCAAAAGAGAATTTTGAGAATTTATGGATAGACCCATATGACTATA ATAATGAGTTACGAGAGGCGGTACTATTACTTGCGGATAGGGGAATGAAACCTTATATCTACAATGCGCAATTATGTGTA CTTCCCGAAGATATACGTTGCTATGCTCAACGGTCTATTTCAGATTGGAAAGACATATACATAGAAGAATGTGACGGATG TGTGCTAAAAGGGCAATGTGCAGGATTTTTTGAATCCAACAGGCAGGCTCATAGTTCGCACATTAAGAAAATAGAACATA TATCATCCGATATATCGTGTTAG
Upstream 100 bases:
>100_bases AAGAAAACAAAAGCTATTATACACTACTTATTTGAGTTATTGCAAAAGCATGACCCTGAAATAAATAGAATTTTTTGGTC TTGGTTAAATTGATTGTATT
Downstream 100 bases:
>100_bases ATAACTGAATGTTTAACTTAAAAATGGAGGTATCAATGAAGAAACTCTTGTTTTTTGCGGTTTCTGCAATTCTTGCAGGT GCAAGCTACTGTTCCTCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: Radical SAM Domain Protein; Radical SAM Superfamily Protein; Radical Sam Domain Protein
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MKQIQGTSYNIEDDIVGRITFGKRNLFGRSNDILVCKDSDKPAFGYLATITEKTTFSAKDKPYCVVNSVENFNEGDVAVI NKKGEIIFVYEINSNHNALMATERCNHRCIMCPQPPILQEKDKTPFNLQLISLFDKNTQEIGITGGEPTLIGDNLFTLIR HIKKELPQTAISILSNGVKFADKEFAMKLAKCRHQDLQIDIPLFSDIAEEHNRIVGAKTFYKTVQGLYNLALFRQRIGLR IVVHKQTYKRLPQFADFIYHNFPFVAQVAFMQMETTGLAKENFENLWIDPYDYNNELREAVLLLADRGMKPYIYNAQLCV LPEDIRCYAQRSISDWKDIYIEECDGCVLKGQCAGFFESNRQAHSSHIKKIEHISSDISC
Sequences:
>Translated_380_residues MKQIQGTSYNIEDDIVGRITFGKRNLFGRSNDILVCKDSDKPAFGYLATITEKTTFSAKDKPYCVVNSVENFNEGDVAVI NKKGEIIFVYEINSNHNALMATERCNHRCIMCPQPPILQEKDKTPFNLQLISLFDKNTQEIGITGGEPTLIGDNLFTLIR HIKKELPQTAISILSNGVKFADKEFAMKLAKCRHQDLQIDIPLFSDIAEEHNRIVGAKTFYKTVQGLYNLALFRQRIGLR IVVHKQTYKRLPQFADFIYHNFPFVAQVAFMQMETTGLAKENFENLWIDPYDYNNELREAVLLLADRGMKPYIYNAQLCV LPEDIRCYAQRSISDWKDIYIEECDGCVLKGQCAGFFESNRQAHSSHIKKIEHISSDISC >Mature_380_residues MKQIQGTSYNIEDDIVGRITFGKRNLFGRSNDILVCKDSDKPAFGYLATITEKTTFSAKDKPYCVVNSVENFNEGDVAVI NKKGEIIFVYEINSNHNALMATERCNHRCIMCPQPPILQEKDKTPFNLQLISLFDKNTQEIGITGGEPTLIGDNLFTLIR HIKKELPQTAISILSNGVKFADKEFAMKLAKCRHQDLQIDIPLFSDIAEEHNRIVGAKTFYKTVQGLYNLALFRQRIGLR IVVHKQTYKRLPQFADFIYHNFPFVAQVAFMQMETTGLAKENFENLWIDPYDYNNELREAVLLLADRGMKPYIYNAQLCV LPEDIRCYAQRSISDWKDIYIEECDGCVLKGQCAGFFESNRQAHSSHIKKIEHISSDISC
Specific function: Unknown
COG id: COG0641
COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43492; Mature: 43492
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQIQGTSYNIEDDIVGRITFGKRNLFGRSNDILVCKDSDKPAFGYLATITEKTTFSAKD CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEECCCC KPYCVVNSVENFNEGDVAVINKKGEIIFVYEINSNHNALMATERCNHRCIMCPQPPILQE CCEEEEECCCCCCCCCEEEEECCCCEEEEEEECCCCCEEEEECCCCCEEEECCCCCCCCC KDKTPFNLQLISLFDKNTQEIGITGGEPTLIGDNLFTLIRHIKKELPQTAISILSNGVKF CCCCCCEEEEEEEECCCCCEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCH ADKEFAMKLAKCRHQDLQIDIPLFSDIAEEHNRIVGAKTFYKTVQGLYNLALFRQRIGLR HHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHCCEE IVVHKQTYKRLPQFADFIYHNFPFVAQVAFMQMETTGLAKENFENLWIDPYDYNNELREA EEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHH VLLLADRGMKPYIYNAQLCVLPEDIRCYAQRSISDWKDIYIEECDGCVLKGQCAGFFESN HHHHHCCCCCCEEECCEEEEECHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCHHHCC RQAHSSHIKKIEHISSDISC CHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKQIQGTSYNIEDDIVGRITFGKRNLFGRSNDILVCKDSDKPAFGYLATITEKTTFSAKD CCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEECCCC KPYCVVNSVENFNEGDVAVINKKGEIIFVYEINSNHNALMATERCNHRCIMCPQPPILQE CCEEEEECCCCCCCCCEEEEECCCCEEEEEEECCCCCEEEEECCCCCEEEECCCCCCCCC KDKTPFNLQLISLFDKNTQEIGITGGEPTLIGDNLFTLIRHIKKELPQTAISILSNGVKF CCCCCCEEEEEEEECCCCCEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCH ADKEFAMKLAKCRHQDLQIDIPLFSDIAEEHNRIVGAKTFYKTVQGLYNLALFRQRIGLR HHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHCCEE IVVHKQTYKRLPQFADFIYHNFPFVAQVAFMQMETTGLAKENFENLWIDPYDYNNELREA EEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHH VLLLADRGMKPYIYNAQLCVLPEDIRCYAQRSISDWKDIYIEECDGCVLKGQCAGFFESN HHHHHCCCCCCEEECCEEEEECHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCHHHCC RQAHSSHIKKIEHISSDISC CHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA