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The map label for this gene is ydeM [C]

Identifier: 150008754

GI number: 150008754

Start: 2528601

End: 2530025

Strand: Direct

Name: ydeM [C]

Synonym: BDI_2144

Alternate gene names: 150008754

Gene position: 2528601-2530025 (Clockwise)

Preceding gene: 150008752

Following gene: 150008755

Centisome position: 52.55

GC content: 36.21

Gene sequence:

>1425_bases
ATGGCTTATCAATTACTACCGTTTCGTTTTGAACGATTCAATGATAATCAATATCTTCTGACAAATGAAGTTGGAGAATA
CATCTTCTTGGCAAATGACGATTTTCACGCCTTTGTTAATGGCGAGTTGGATGAACATAGTGATTTATTCTATGACCTTG
CTTCCAAACAAATAGCAACAACTGACAAGGTCGAAGATGTGGTACAGATGCTTGCCACCAAGTTTAGAACGAAGAAAAGC
ATCTTGCGTGATTTCACTTCGTTACACATGATTGTACCAACGCTACGTTGTAATTCAAGCTGTATTTATTGTCAGGTTGC
CCGTAAGAATATGGATGACCATTCTGCTGATATGACTAAAAAGACAGCAAAGAATGTAGTGAAAACCATATTTCAATCTC
CATCGCCTTGTATCAAAATAGAATTTCAAGGTGGAGACCCGTCGACAGACTTCAATATGGTAAAGTATATCATCGAAGAA
GCTGAATGGCAAAACTTGTTCAAGAAAAGAGAATTGGATTTTGTTATCTGTACTAACCTTACTCTACTTAATGAAGATAT
GGTGCAGTATTTGAAGAAACATAAATGTATGATTTCCACTTCTCTTGATGGTCCTAAAGATTTGCACGACATGAACCGTC
CTTTGCAAAACAAGGATTTAGACCACCATGCCATTTTTGAGAAGAATCTTGCCATGATAAGAAATATATGGGGAAATAAT
GAGTGTGTTTCTGCATTGATGACTACTTCCAAATATAGTTTGGGACGTTTCAAGGAGATTATAGACGAATACATCAGATT
GGGATTCAATAATATATTTCTACGCTCTCTCAATCCTTATGGATTCGCAAAGCAATATAAGGATAAGATAGCCTATCCTG
TGGAAGAATTTATTGCGAATTACAAAGAAGGACTGAATTATATTATAGAATTGAATAAACAAGGAATTTTCTTTGTAGAG
GGTTTCGCTGCATTGTTGCTAAAAAGAATGCTAACCCCATTTGCAACAGGATTTGTTGATTTGCAATCTCCGGCAGGAGT
GGGTATCGCAGGGGTGATATATGATTATGACGGCAATGTGTATGTTTCGGATGAAGCACGAATGATGGCTCGCTTTAAAA
ACTACTATTTCAGATTGGGTAATGTGAACGAAAATACTTATCAGGAAATGTTTAACGGAGAGTTGCTACATCATATCATT
GCTTCTGCTTGTAATGAATGTTTGCCTGTCTGTGCTGAATGTGTTTTTCAACCTTATTGCGGAGCTGACCCTGTTCGTAA
TATGTCAGAACAAGGAGATATGATAGGTTTTAGACCCACAAATGAAATGTGTAAGAAAACAAAAGCTATTATACACTACT
TATTTGAGTTATTGCAAAAGCATGACCCTGAAATAAATAGAATTTTTTGGTCTTGGTTAAATTGA

Upstream 100 bases:

>100_bases
GATAGACCAACAGATTCGATATAATACAAATGCACAGTTTGGGCATATTCGTAATATGATAGTTCAAGAAGCGTTCAAAC
CTGTAACAAAATGATGAATT

Downstream 100 bases:

>100_bases
TTGTATTATGAAACAGATTCAAGGTACTTCATACAATATTGAAGATGATATAGTTGGACGCATAACCTTTGGAAAAAGGA
ATTTGTTTGGTCGTTCCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MAYQLLPFRFERFNDNQYLLTNEVGEYIFLANDDFHAFVNGELDEHSDLFYDLASKQIATTDKVEDVVQMLATKFRTKKS
ILRDFTSLHMIVPTLRCNSSCIYCQVARKNMDDHSADMTKKTAKNVVKTIFQSPSPCIKIEFQGGDPSTDFNMVKYIIEE
AEWQNLFKKRELDFVICTNLTLLNEDMVQYLKKHKCMISTSLDGPKDLHDMNRPLQNKDLDHHAIFEKNLAMIRNIWGNN
ECVSALMTTSKYSLGRFKEIIDEYIRLGFNNIFLRSLNPYGFAKQYKDKIAYPVEEFIANYKEGLNYIIELNKQGIFFVE
GFAALLLKRMLTPFATGFVDLQSPAGVGIAGVIYDYDGNVYVSDEARMMARFKNYYFRLGNVNENTYQEMFNGELLHHII
ASACNECLPVCAECVFQPYCGADPVRNMSEQGDMIGFRPTNEMCKKTKAIIHYLFELLQKHDPEINRIFWSWLN

Sequences:

>Translated_474_residues
MAYQLLPFRFERFNDNQYLLTNEVGEYIFLANDDFHAFVNGELDEHSDLFYDLASKQIATTDKVEDVVQMLATKFRTKKS
ILRDFTSLHMIVPTLRCNSSCIYCQVARKNMDDHSADMTKKTAKNVVKTIFQSPSPCIKIEFQGGDPSTDFNMVKYIIEE
AEWQNLFKKRELDFVICTNLTLLNEDMVQYLKKHKCMISTSLDGPKDLHDMNRPLQNKDLDHHAIFEKNLAMIRNIWGNN
ECVSALMTTSKYSLGRFKEIIDEYIRLGFNNIFLRSLNPYGFAKQYKDKIAYPVEEFIANYKEGLNYIIELNKQGIFFVE
GFAALLLKRMLTPFATGFVDLQSPAGVGIAGVIYDYDGNVYVSDEARMMARFKNYYFRLGNVNENTYQEMFNGELLHHII
ASACNECLPVCAECVFQPYCGADPVRNMSEQGDMIGFRPTNEMCKKTKAIIHYLFELLQKHDPEINRIFWSWLN
>Mature_473_residues
AYQLLPFRFERFNDNQYLLTNEVGEYIFLANDDFHAFVNGELDEHSDLFYDLASKQIATTDKVEDVVQMLATKFRTKKSI
LRDFTSLHMIVPTLRCNSSCIYCQVARKNMDDHSADMTKKTAKNVVKTIFQSPSPCIKIEFQGGDPSTDFNMVKYIIEEA
EWQNLFKKRELDFVICTNLTLLNEDMVQYLKKHKCMISTSLDGPKDLHDMNRPLQNKDLDHHAIFEKNLAMIRNIWGNNE
CVSALMTTSKYSLGRFKEIIDEYIRLGFNNIFLRSLNPYGFAKQYKDKIAYPVEEFIANYKEGLNYIIELNKQGIFFVEG
FAALLLKRMLTPFATGFVDLQSPAGVGIAGVIYDYDGNVYVSDEARMMARFKNYYFRLGNVNENTYQEMFNGELLHHIIA
SACNECLPVCAECVFQPYCGADPVRNMSEQGDMIGFRPTNEMCKKTKAIIHYLFELLQKHDPEINRIFWSWLN

Specific function: Unknown

COG id: COG0641

COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. Anaerobic sulfatase-maturating enzyme family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 54966; Mature: 54835

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYQLLPFRFERFNDNQYLLTNEVGEYIFLANDDFHAFVNGELDEHSDLFYDLASKQIAT
CCCCCCCHHHHHCCCCCEEEEECCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHH
TDKVEDVVQMLATKFRTKKSILRDFTSLHMIVPTLRCNSSCIYCQVARKNMDDHSADMTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHH
KTAKNVVKTIFQSPSPCIKIEFQGGDPSTDFNMVKYIIEEAEWQNLFKKRELDFVICTNL
HHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
TLLNEDMVQYLKKHKCMISTSLDGPKDLHDMNRPLQNKDLDHHAIFEKNLAMIRNIWGNN
HHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCH
ECVSALMTTSKYSLGRFKEIIDEYIRLGFNNIFLRSLNPYGFAKQYKDKIAYPVEEFIAN
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHH
YKEGLNYIIELNKQGIFFVEGFAALLLKRMLTPFATGFVDLQSPAGVGIAGVIYDYDGNV
HHHCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEEECCCCE
YVSDEARMMARFKNYYFRLGNVNENTYQEMFNGELLHHIIASACNECLPVCAECVFQPYC
EECHHHHHHHHHHHHHEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GADPVRNMSEQGDMIGFRPTNEMCKKTKAIIHYLFELLQKHDPEINRIFWSWLN
CCCHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure 
AYQLLPFRFERFNDNQYLLTNEVGEYIFLANDDFHAFVNGELDEHSDLFYDLASKQIAT
CCCCCCHHHHHCCCCCEEEEECCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHH
TDKVEDVVQMLATKFRTKKSILRDFTSLHMIVPTLRCNSSCIYCQVARKNMDDHSADMTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHH
KTAKNVVKTIFQSPSPCIKIEFQGGDPSTDFNMVKYIIEEAEWQNLFKKRELDFVICTNL
HHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
TLLNEDMVQYLKKHKCMISTSLDGPKDLHDMNRPLQNKDLDHHAIFEKNLAMIRNIWGNN
HHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCH
ECVSALMTTSKYSLGRFKEIIDEYIRLGFNNIFLRSLNPYGFAKQYKDKIAYPVEEFIAN
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHH
YKEGLNYIIELNKQGIFFVEGFAALLLKRMLTPFATGFVDLQSPAGVGIAGVIYDYDGNV
HHHCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEEECCCCE
YVSDEARMMARFKNYYFRLGNVNENTYQEMFNGELLHHIIASACNECLPVCAECVFQPYC
EECHHHHHHHHHHHHHEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GADPVRNMSEQGDMIGFRPTNEMCKKTKAIIHYLFELLQKHDPEINRIFWSWLN
CCCHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]