Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150008745

Identifier: 150008745

GI number: 150008745

Start: 2518229

End: 2520574

Strand: Direct

Name: 150008745

Synonym: BDI_2135

Alternate gene names: NA

Gene position: 2518229-2520574 (Clockwise)

Preceding gene: 150008744

Following gene: 150008746

Centisome position: 52.34

GC content: 40.49

Gene sequence:

>2346_bases
ATGAAAAATATACCATACCAGCAGAACGCTATCAATGAACTGACAGATAAAACGATCCGTCTGTTAAACCTCGGTGGAAA
ACGACACAAAATTGTGTTTGAAGCGCCAACAGGTGCGGGAAAAACGGTCATGACCTGTCAGGCTTTGGCAAATATAACCG
ACGAATTGAAAGAACGTGGTGACAGCCGTTATCAGGAAGTTGCCTATATTTGGTTTGCACCTCGTAAACTTCACCTGCAA
AGTTATGCCAGCTTAAAGAATGCCTTTGGCGAAACACGGAAACTTCGGCCTGTAATGTTTGACGAGATTGACCAGAGTGA
AGGCATACAACCTGGAGAAATATTGTTTGTCAACTGGGAAAGTGTGAACAAAGAAAGTAATGTCATGGTACGCGAAAACG
AAAGCTTTGCTTCTTTGTATGAAATTGCACGACGGACACAAGAAGAATACGATTTGCCCATTGTTGCCATCATAGACGAG
GAACACATGTTTTGGTCAAAAACTGCCGATAAATCGGCAGCAGTGCTGGAACGTATCAATCCGGCTGTAGAACTGCGTAT
TTCGGCCACTCCCAAGACACTTCATCCTGATGAAAAAGTAAAAGTTTACCGACAGGATGTTATTGCGGCTGAAATGATTA
AGAAAGAAGTCGTGCTGAATCCTGATATAGAACTGGATTTCAGTGAAGAACGCACACTGAACGAAAATCTGATTAAGGCG
GCATTGGCAAAACGTAATCAGTTGGCTGAGCTTTATCAGGAATTGGGCGTCAAAATCAATCCCCTATTACTTATCCAGCT
GCCCAACGATGTGAAGGAAACCATGACTTCGGAAGATCAAGCTATCGCAGAACAGGTGAAAACCTATTTGGAAGCTATAT
GCGGGATAACCGCCGAAAATGGATTATTGGCCGTATGGCTCGCCAACGAAAAAGAGAATCTCGCCGGACTGGAACGTCCC
GATAATATGACGCAAGTATTGCTATTCAAAGAAGCAATTGCTTTGGGTTGGGACTGCCCTCGTGCAGCTGTACTGCTAAT
CTTCAGAAAATTGCAAAGCGACCAGTTTACGATACAAACTGTAGGACGTATTCTGAGAATGCCGGAACAGAAACATTATC
CGAAAGAACAGCTTAATATCGGTTATGTTTATACCGACATTGCAAAAGATAAAATTCAGATTGTCACAGCCGATTCCGAC
TATATCTTGAAAAATACGATTAGGGCATGCAGACGTGAAAATCTTGAGAATGTATCTCTACCGGCTTACTATTCAGAACG
CCCTAATGTGGAAAGAAATTATTTAGGACCCGACTTCAAAAAAACATTGTATGAAGTGGCTGATGAATTCTGGAAACTGG
AAAGAGGTGCCGGATTGTTTTCTATCGCTGAATTGGCCGCTTTAAGAAATGATAATGATGAATTTACTCCGTTGCCAGAA
AGTGATGACGATTTAGTAAATGAAAACAGAAGACGGGTAAAGAATTCAATTCGTTTGGATGTCAAGACAATCAATGTGGA
GATTCCGAAAGATGTACACTTCCAGAATGAAGAACAGATATTGAAAGTAGATCAAGTGCGCTTTGCCCGTAAAGCATCTG
AAATAGACCGTGTATTTATGGCATATATAAGCGGTAAGGGACATCAATTTGAGAGTAAAGGTAGAGCCGATAAAATAGCC
AACTATCTGCTTGAAATGCTCGCCGACTATTTTGGAATTTTCGATACAGATGCCAAGAAGGTCGTTCTTTATTATGATAA
CAGACCCAAATTTGACCGTTTACTGGACACTGCCTTAGAAACATATGCCCGTAAAAGAGAGCGAGCAAAGAAAAGATCTG
CGGCAGCCAGAGAATTAAAACAATACAACTGGGAAATTCCGGAAGAAAGAGTATATGACAGCGAGACTAACCATATCGAA
ACAGCAAATAATCATGCTTTGCTGCCATTCGTACAACTTAACGAAGCTTCTAATCCGGAGAAGGAATTTGTGAAATATTT
GGAAGAACATTCACAATGGATTGACTGGTGGTATAAGAATGGGGACAAAGGAAAACAACATTATGCCATTGCATACGGAA
AATCTTTATTTTATATTGATTTCGTTATCCGTATGAAGAATGGACATGTATATCTTTTCGATACGAAAAGTGCCGGAAGT
GATGTAACTGCTCCGGAGAAACATAATGCCTTGTTGCAATATATCCAGGAATATTCAACTAAAGATACACCTCTTTATGG
AGGAGTTATCATTCAAGATGGAAGTAACTGGCTATATTCCAAACTACCTATTGAGAATACTACTGATTTGTTAAACTGGG
ATGCTTTTTATCCTGAAAACGCATAA

Upstream 100 bases:

>100_bases
ATAGAAACATGATATGTGGTTTAAGTTATTCGAAATTTTCGAATAATTGCTTCTGGAAAAAGGTAATTCCATAATAAACA
CTTAAAATAAAAAAGGAATA

Downstream 100 bases:

>100_bases
AGATTATGGCTAAAGGTATAGATCCGAAATTTGTTCACTACGGCATCCGCAAAGATGATTTAGCTATGATAGAAGCAATC
TGTGAAGCGGAAGGTGTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Type III Restriction Res Subunit Family; Type III Restriction Res Subunit; Type III Restriction; Superfamily II DNA/RNA Helicase; Type III Restriction Res Subunit Superfamily

Number of amino acids: Translated: 781; Mature: 781

Protein sequence:

>781_residues
MKNIPYQQNAINELTDKTIRLLNLGGKRHKIVFEAPTGAGKTVMTCQALANITDELKERGDSRYQEVAYIWFAPRKLHLQ
SYASLKNAFGETRKLRPVMFDEIDQSEGIQPGEILFVNWESVNKESNVMVRENESFASLYEIARRTQEEYDLPIVAIIDE
EHMFWSKTADKSAAVLERINPAVELRISATPKTLHPDEKVKVYRQDVIAAEMIKKEVVLNPDIELDFSEERTLNENLIKA
ALAKRNQLAELYQELGVKINPLLLIQLPNDVKETMTSEDQAIAEQVKTYLEAICGITAENGLLAVWLANEKENLAGLERP
DNMTQVLLFKEAIALGWDCPRAAVLLIFRKLQSDQFTIQTVGRILRMPEQKHYPKEQLNIGYVYTDIAKDKIQIVTADSD
YILKNTIRACRRENLENVSLPAYYSERPNVERNYLGPDFKKTLYEVADEFWKLERGAGLFSIAELAALRNDNDEFTPLPE
SDDDLVNENRRRVKNSIRLDVKTINVEIPKDVHFQNEEQILKVDQVRFARKASEIDRVFMAYISGKGHQFESKGRADKIA
NYLLEMLADYFGIFDTDAKKVVLYYDNRPKFDRLLDTALETYARKRERAKKRSAAARELKQYNWEIPEERVYDSETNHIE
TANNHALLPFVQLNEASNPEKEFVKYLEEHSQWIDWWYKNGDKGKQHYAIAYGKSLFYIDFVIRMKNGHVYLFDTKSAGS
DVTAPEKHNALLQYIQEYSTKDTPLYGGVIIQDGSNWLYSKLPIENTTDLLNWDAFYPENA

Sequences:

>Translated_781_residues
MKNIPYQQNAINELTDKTIRLLNLGGKRHKIVFEAPTGAGKTVMTCQALANITDELKERGDSRYQEVAYIWFAPRKLHLQ
SYASLKNAFGETRKLRPVMFDEIDQSEGIQPGEILFVNWESVNKESNVMVRENESFASLYEIARRTQEEYDLPIVAIIDE
EHMFWSKTADKSAAVLERINPAVELRISATPKTLHPDEKVKVYRQDVIAAEMIKKEVVLNPDIELDFSEERTLNENLIKA
ALAKRNQLAELYQELGVKINPLLLIQLPNDVKETMTSEDQAIAEQVKTYLEAICGITAENGLLAVWLANEKENLAGLERP
DNMTQVLLFKEAIALGWDCPRAAVLLIFRKLQSDQFTIQTVGRILRMPEQKHYPKEQLNIGYVYTDIAKDKIQIVTADSD
YILKNTIRACRRENLENVSLPAYYSERPNVERNYLGPDFKKTLYEVADEFWKLERGAGLFSIAELAALRNDNDEFTPLPE
SDDDLVNENRRRVKNSIRLDVKTINVEIPKDVHFQNEEQILKVDQVRFARKASEIDRVFMAYISGKGHQFESKGRADKIA
NYLLEMLADYFGIFDTDAKKVVLYYDNRPKFDRLLDTALETYARKRERAKKRSAAARELKQYNWEIPEERVYDSETNHIE
TANNHALLPFVQLNEASNPEKEFVKYLEEHSQWIDWWYKNGDKGKQHYAIAYGKSLFYIDFVIRMKNGHVYLFDTKSAGS
DVTAPEKHNALLQYIQEYSTKDTPLYGGVIIQDGSNWLYSKLPIENTTDLLNWDAFYPENA
>Mature_781_residues
MKNIPYQQNAINELTDKTIRLLNLGGKRHKIVFEAPTGAGKTVMTCQALANITDELKERGDSRYQEVAYIWFAPRKLHLQ
SYASLKNAFGETRKLRPVMFDEIDQSEGIQPGEILFVNWESVNKESNVMVRENESFASLYEIARRTQEEYDLPIVAIIDE
EHMFWSKTADKSAAVLERINPAVELRISATPKTLHPDEKVKVYRQDVIAAEMIKKEVVLNPDIELDFSEERTLNENLIKA
ALAKRNQLAELYQELGVKINPLLLIQLPNDVKETMTSEDQAIAEQVKTYLEAICGITAENGLLAVWLANEKENLAGLERP
DNMTQVLLFKEAIALGWDCPRAAVLLIFRKLQSDQFTIQTVGRILRMPEQKHYPKEQLNIGYVYTDIAKDKIQIVTADSD
YILKNTIRACRRENLENVSLPAYYSERPNVERNYLGPDFKKTLYEVADEFWKLERGAGLFSIAELAALRNDNDEFTPLPE
SDDDLVNENRRRVKNSIRLDVKTINVEIPKDVHFQNEEQILKVDQVRFARKASEIDRVFMAYISGKGHQFESKGRADKIA
NYLLEMLADYFGIFDTDAKKVVLYYDNRPKFDRLLDTALETYARKRERAKKRSAAARELKQYNWEIPEERVYDSETNHIE
TANNHALLPFVQLNEASNPEKEFVKYLEEHSQWIDWWYKNGDKGKQHYAIAYGKSLFYIDFVIRMKNGHVYLFDTKSAGS
DVTAPEKHNALLQYIQEYSTKDTPLYGGVIIQDGSNWLYSKLPIENTTDLLNWDAFYPENA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90226; Mature: 90226

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIPYQQNAINELTDKTIRLLNLGGKRHKIVFEAPTGAGKTVMTCQALANITDELKERG
CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
DSRYQEVAYIWFAPRKLHLQSYASLKNAFGETRKLRPVMFDEIDQSEGIQPGEILFVNWE
CCHHHEEEEEEECCHHHHHHHHHHHHHHHCHHHCCCCHHHHHCCHHCCCCCCCEEEEEEC
SVNKESNVMVRENESFASLYEIARRTQEEYDLPIVAIIDEEHMFWSKTADKSAAVLERIN
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCHHHHHHHHCC
PAVELRISATPKTLHPDEKVKVYRQDVIAAEMIKKEVVLNPDIELDFSEERTLNENLIKA
CEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCEECCCCCHHHHHHHHHH
ALAKRNQLAELYQELGVKINPLLLIQLPNDVKETMTSEDQAIAEQVKTYLEAICGITAEN
HHHHHHHHHHHHHHHCCEECCEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
GLLAVWLANEKENLAGLERPDNMTQVLLFKEAIALGWDCPRAAVLLIFRKLQSDQFTIQT
CEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEHHH
VGRILRMPEQKHYPKEQLNIGYVYTDIAKDKIQIVTADSDYILKNTIRACRRENLENVSL
HHHHHCCCCHHCCCHHHCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCC
PAYYSERPNVERNYLGPDFKKTLYEVADEFWKLERGAGLFSIAELAALRNDNDEFTPLPE
CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC
SDDDLVNENRRRVKNSIRLDVKTINVEIPKDVHFQNEEQILKVDQVRFARKASEIDRVFM
CCHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AYISGKGHQFESKGRADKIANYLLEMLADYFGIFDTDAKKVVLYYDNRPKFDRLLDTALE
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHH
TYARKRERAKKRSAAARELKQYNWEIPEERVYDSETNHIETANNHALLPFVQLNEASNPE
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEECCCCCEEEEEEEECCCCCCH
KEFVKYLEEHSQWIDWWYKNGDKGKQHYAIAYGKSLFYIDFVIRMKNGHVYLFDTKSAGS
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEEEEEEECCEEEEEECCCCCC
DVTAPEKHNALLQYIQEYSTKDTPLYGGVIIQDGSNWLYSKLPIENTTDLLNWDAFYPEN
CCCCCHHHHHHHHHHHHHCCCCCCEECCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCC
A
C
>Mature Secondary Structure
MKNIPYQQNAINELTDKTIRLLNLGGKRHKIVFEAPTGAGKTVMTCQALANITDELKERG
CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
DSRYQEVAYIWFAPRKLHLQSYASLKNAFGETRKLRPVMFDEIDQSEGIQPGEILFVNWE
CCHHHEEEEEEECCHHHHHHHHHHHHHHHCHHHCCCCHHHHHCCHHCCCCCCCEEEEEEC
SVNKESNVMVRENESFASLYEIARRTQEEYDLPIVAIIDEEHMFWSKTADKSAAVLERIN
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCHHHHHHHHCC
PAVELRISATPKTLHPDEKVKVYRQDVIAAEMIKKEVVLNPDIELDFSEERTLNENLIKA
CEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCEECCCCCHHHHHHHHHH
ALAKRNQLAELYQELGVKINPLLLIQLPNDVKETMTSEDQAIAEQVKTYLEAICGITAEN
HHHHHHHHHHHHHHHCCEECCEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
GLLAVWLANEKENLAGLERPDNMTQVLLFKEAIALGWDCPRAAVLLIFRKLQSDQFTIQT
CEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEHHH
VGRILRMPEQKHYPKEQLNIGYVYTDIAKDKIQIVTADSDYILKNTIRACRRENLENVSL
HHHHHCCCCHHCCCHHHCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCC
PAYYSERPNVERNYLGPDFKKTLYEVADEFWKLERGAGLFSIAELAALRNDNDEFTPLPE
CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC
SDDDLVNENRRRVKNSIRLDVKTINVEIPKDVHFQNEEQILKVDQVRFARKASEIDRVFM
CCHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AYISGKGHQFESKGRADKIANYLLEMLADYFGIFDTDAKKVVLYYDNRPKFDRLLDTALE
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHH
TYARKRERAKKRSAAARELKQYNWEIPEERVYDSETNHIETANNHALLPFVQLNEASNPE
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEECCCCCEEEEEEEECCCCCCH
KEFVKYLEEHSQWIDWWYKNGDKGKQHYAIAYGKSLFYIDFVIRMKNGHVYLFDTKSAGS
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEEEEEEECCEEEEEECCCCCC
DVTAPEKHNALLQYIQEYSTKDTPLYGGVIIQDGSNWLYSKLPIENTTDLLNWDAFYPEN
CCCCCHHHHHHHHHHHHHCCCCCCEECCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA