| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is mod [H]
Identifier: 150008744
GI number: 150008744
Start: 2516309
End: 2518117
Strand: Direct
Name: mod [H]
Synonym: BDI_2134
Alternate gene names: 150008744
Gene position: 2516309-2518117 (Clockwise)
Preceding gene: 150008743
Following gene: 150008745
Centisome position: 52.3
GC content: 34.94
Gene sequence:
>1809_bases ATGAACAGTAATGATAGAGCCAATCTTATAAAACGTGTCAACACTTTAGAAGGACTGACCGATAAGGAACGTAGTGCCCT GTTAGGTTTGCTGCGAGAGAATAAAACTTATGGTTTGGTATGGGAAGATAAGCCCGAAGTCGTAGAAGAACGTCTTCGTG ATGAACTGCCTATCTTGACAGAGGTGCCGGAACGTACCATTATCAGTGAAGATAAAGATGCACCAAACCATATTCTGATT GAAGGAGATAATCTGGAAGCCCTTGCTACCTTAGCTTATACGCATGAGGGTAAAATTGATATAATCTATATAGATCCCCC ATATAATACAGGTAATAATGATTTTATATATAATGATAGCTATGTAGACAAAGAAGATTCTTATCGCCATTCTAAATGGT TGTCATTTATGAGTCGTCGTCTGAGAATAGCAAAAAAATTACTATCTGATTATGGAGTAATATTCATTTCGATTGATGAT AATGAACAAGCAGATTTAAAAATATTATGTGATAGTATATTTATGCCATCAAATTTTTGTGGACAATTTATATGGAGAAA GAAAAGTGGAGGTGGACAAACGGACAGATACTTTGTAACAGAACATGAATACATATTAGTTTATCAAGCAACCAATAAAT TTTGTTGGAAAGATATTCAAATTGAGAAATCCAGAAAAAATTACAAATACCAAGATGAAAAAGGATCTTATAATCTCATT AAATTAGAAAAATGGGGTAGTTCAGCTCATAAAGAAGATAGACCTTCCATGTATTTTCCTATTAAGAATCCCGACGGTGA AGATTTTTATCCAGTGGCTCCTGATGGAAAAGCTGGAAGATGGAGAGTCGGGGTAAAGAAAATGCAAACTTTAATAAAAG ACAATTTAATAGAATGGAAAAATGGGATACCGTATGAAAAAGACTATTATAGTGAAACCGAAGTCAAAACAAAGACTCAA AAAAGTAGAAGTATCTTATATAATGTTGGAGAAACTGGAGATGGCAGTAATTTATTGACCAATATTTTTAGAGAAAAGGA TGTTTTTCAAAACCCAAAACCATTAAGTTTAATAAAAGAACTTATATCACATAATAGCGCAAATTATATTCTTGATTTCT TTTCTGGAAGTGGTACTACACTTCATGCGACTATGCAACTTAATGCAGAAGATGGAGGAAATCGTCAATGCATCCTCATA ACAAATAATGAAAACAATATTTGTGAAAATATCACTTATAAAAGAAATCAGTTAGTAATTAATGGATATACAGATCTCAA CAACGAAGAAGTTCCGGGATTAACGAAAAACAATCTCCGCTACTACCGTACCGGATTTGTTGGTCGCAGTCGCTCGATGC AAAATATGAGGAAACTTGTTAATCTTGCTACAGATATGCTTTGTATCAAGGAAAACCTCTATACGGAGCAAAATACCTTT GGAGGTCAGAAGACTTATAAAAATGTTTTCCGCTATTTCGATGACGGGAAAAAGCAAATGCTTATTATTTATCGTGAAGA AGCCATCGATGAGTTGGTTGATATAATCTATGATATGAACATACCTCAACCAATAAAAGTTTATGTGTTCTCACCCAGTG AAGACCCTTGGGAAGGTTCGTTTGATGATGTCAGTGACAAGGTGGAACTATGTGCTCTGCCACAAGCCATCTACAATACT TACCGAAGAATCTTGCCAAAGAAAAAGGATGCAGTAGTCATGCCGGAAGAAGATGCGCTGGCAAGCACTCAAGAAGATAA AGACCTGTTTGATGGAATGTTGAACTTTGAATACGATGAGGAAGCATAA
Upstream 100 bases:
>100_bases TAGCACGTGTTCTGGATGTAGATATTAAAGAACTGCTGAACTCTACACGTGACGATGTTCAGTTAGTCAGAATTCAAAAA CAGTAAAGCCAAGTAATGTT
Downstream 100 bases:
>100_bases ACATATATCAGATAGAAACATGATATGTGGTTTAAGTTATTCGAAATTTTCGAATAATTGCTTCTGGAAAAAGGTAATTC CATAATAAACACTTAAAATA
Product: methyltransferase
Products: NA
Alternate protein names: M.StyLTI; StyLTI methyltransferase [H]
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
>602_residues MNSNDRANLIKRVNTLEGLTDKERSALLGLLRENKTYGLVWEDKPEVVEERLRDELPILTEVPERTIISEDKDAPNHILI EGDNLEALATLAYTHEGKIDIIYIDPPYNTGNNDFIYNDSYVDKEDSYRHSKWLSFMSRRLRIAKKLLSDYGVIFISIDD NEQADLKILCDSIFMPSNFCGQFIWRKKSGGGQTDRYFVTEHEYILVYQATNKFCWKDIQIEKSRKNYKYQDEKGSYNLI KLEKWGSSAHKEDRPSMYFPIKNPDGEDFYPVAPDGKAGRWRVGVKKMQTLIKDNLIEWKNGIPYEKDYYSETEVKTKTQ KSRSILYNVGETGDGSNLLTNIFREKDVFQNPKPLSLIKELISHNSANYILDFFSGSGTTLHATMQLNAEDGGNRQCILI TNNENNICENITYKRNQLVINGYTDLNNEEVPGLTKNNLRYYRTGFVGRSRSMQNMRKLVNLATDMLCIKENLYTEQNTF GGQKTYKNVFRYFDDGKKQMLIIYREEAIDELVDIIYDMNIPQPIKVYVFSPSEDPWEGSFDDVSDKVELCALPQAIYNT YRRILPKKKDAVVMPEEDALASTQEDKDLFDGMLNFEYDEEA
Sequences:
>Translated_602_residues MNSNDRANLIKRVNTLEGLTDKERSALLGLLRENKTYGLVWEDKPEVVEERLRDELPILTEVPERTIISEDKDAPNHILI EGDNLEALATLAYTHEGKIDIIYIDPPYNTGNNDFIYNDSYVDKEDSYRHSKWLSFMSRRLRIAKKLLSDYGVIFISIDD NEQADLKILCDSIFMPSNFCGQFIWRKKSGGGQTDRYFVTEHEYILVYQATNKFCWKDIQIEKSRKNYKYQDEKGSYNLI KLEKWGSSAHKEDRPSMYFPIKNPDGEDFYPVAPDGKAGRWRVGVKKMQTLIKDNLIEWKNGIPYEKDYYSETEVKTKTQ KSRSILYNVGETGDGSNLLTNIFREKDVFQNPKPLSLIKELISHNSANYILDFFSGSGTTLHATMQLNAEDGGNRQCILI TNNENNICENITYKRNQLVINGYTDLNNEEVPGLTKNNLRYYRTGFVGRSRSMQNMRKLVNLATDMLCIKENLYTEQNTF GGQKTYKNVFRYFDDGKKQMLIIYREEAIDELVDIIYDMNIPQPIKVYVFSPSEDPWEGSFDDVSDKVELCALPQAIYNT YRRILPKKKDAVVMPEEDALASTQEDKDLFDGMLNFEYDEEA >Mature_602_residues MNSNDRANLIKRVNTLEGLTDKERSALLGLLRENKTYGLVWEDKPEVVEERLRDELPILTEVPERTIISEDKDAPNHILI EGDNLEALATLAYTHEGKIDIIYIDPPYNTGNNDFIYNDSYVDKEDSYRHSKWLSFMSRRLRIAKKLLSDYGVIFISIDD NEQADLKILCDSIFMPSNFCGQFIWRKKSGGGQTDRYFVTEHEYILVYQATNKFCWKDIQIEKSRKNYKYQDEKGSYNLI KLEKWGSSAHKEDRPSMYFPIKNPDGEDFYPVAPDGKAGRWRVGVKKMQTLIKDNLIEWKNGIPYEKDYYSETEVKTKTQ KSRSILYNVGETGDGSNLLTNIFREKDVFQNPKPLSLIKELISHNSANYILDFFSGSGTTLHATMQLNAEDGGNRQCILI TNNENNICENITYKRNQLVINGYTDLNNEEVPGLTKNNLRYYRTGFVGRSRSMQNMRKLVNLATDMLCIKENLYTEQNTF GGQKTYKNVFRYFDDGKKQMLIIYREEAIDELVDIIYDMNIPQPIKVYVFSPSEDPWEGSFDDVSDKVELCALPQAIYNT YRRILPKKKDAVVMPEEDALASTQEDKDLFDGMLNFEYDEEA
Specific function: Binds the system-specific DNA recognition site 5'-CAGAG- 3'. Necessary for restriction and for methylation of A-4 [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 69851; Mature: 69851
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSNDRANLIKRVNTLEGLTDKERSALLGLLRENKTYGLVWEDKPEVVEERLRDELPILT CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCHH EVPERTIISEDKDAPNHILIEGDNLEALATLAYTHEGKIDIIYIDPPYNTGNNDFIYNDS CCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEECCC YVDKEDSYRHSKWLSFMSRRLRIAKKLLSDYGVIFISIDDNEQADLKILCDSIFMPSNFC CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEHHHCCCHHHH GQFIWRKKSGGGQTDRYFVTEHEYILVYQATNKFCWKDIQIEKSRKNYKYQDEKGSYNLI HHEEEEECCCCCCCCCEEEECCCEEEEEECCCCCEEECEEEECCCCCCCCCCCCCCEEEE KLEKWGSSAHKEDRPSMYFPIKNPDGEDFYPVAPDGKAGRWRVGVKKMQTLIKDNLIEWK EEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHC NGIPYEKDYYSETEVKTKTQKSRSILYNVGETGDGSNLLTNIFREKDVFQNPKPLSLIKE CCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH LISHNSANYILDFFSGSGTTLHATMQLNAEDGGNRQCILITNNENNICENITYKRNQLVI HHHCCCCCEEEEEECCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCHHCCEEECCEEEE NGYTDLNNEEVPGLTKNNLRYYRTGFVGRSRSMQNMRKLVNLATDMLCIKENLYTEQNTF ECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGQKTYKNVFRYFDDGKKQMLIIYREEAIDELVDIIYDMNIPQPIKVYVFSPSEDPWEGS CCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCC FDDVSDKVELCALPQAIYNTYRRILPKKKDAVVMPEEDALASTQEDKDLFDGMLNFEYDE CCCHHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCCCHHHCCCCCHHHHHHHHHCCCCCC EA CC >Mature Secondary Structure MNSNDRANLIKRVNTLEGLTDKERSALLGLLRENKTYGLVWEDKPEVVEERLRDELPILT CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCHH EVPERTIISEDKDAPNHILIEGDNLEALATLAYTHEGKIDIIYIDPPYNTGNNDFIYNDS CCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEECCC YVDKEDSYRHSKWLSFMSRRLRIAKKLLSDYGVIFISIDDNEQADLKILCDSIFMPSNFC CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEHHHCCCHHHH GQFIWRKKSGGGQTDRYFVTEHEYILVYQATNKFCWKDIQIEKSRKNYKYQDEKGSYNLI HHEEEEECCCCCCCCCEEEECCCEEEEEECCCCCEEECEEEECCCCCCCCCCCCCCEEEE KLEKWGSSAHKEDRPSMYFPIKNPDGEDFYPVAPDGKAGRWRVGVKKMQTLIKDNLIEWK EEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHC NGIPYEKDYYSETEVKTKTQKSRSILYNVGETGDGSNLLTNIFREKDVFQNPKPLSLIKE CCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH LISHNSANYILDFFSGSGTTLHATMQLNAEDGGNRQCILITNNENNICENITYKRNQLVI HHHCCCCCEEEEEECCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCHHCCEEECCEEEE NGYTDLNNEEVPGLTKNNLRYYRTGFVGRSRSMQNMRKLVNLATDMLCIKENLYTEQNTF ECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGQKTYKNVFRYFDDGKKQMLIIYREEAIDELVDIIYDMNIPQPIKVYVFSPSEDPWEGS CCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCC FDDVSDKVELCALPQAIYNTYRRILPKKKDAVVMPEEDALASTQEDKDLFDGMLNFEYDE CCCHHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCCCHHHCCCCCHHHHHHHHHCCCCCC EA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8387444; 11677609 [H]