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The map label for this gene is udp [H]

Identifier: 150008727

GI number: 150008727

Start: 2498731

End: 2499600

Strand: Direct

Name: udp [H]

Synonym: BDI_2117

Alternate gene names: 150008727

Gene position: 2498731-2499600 (Clockwise)

Preceding gene: 150008726

Following gene: 150008728

Centisome position: 51.93

GC content: 47.7

Gene sequence:

>870_bases
ATGAGAACAATCCCCGCTTCAGAATTAGTGATCCATTCAGATGGCAGTGTTTTCCATCTGCATTTAAAACCGGAGCAACT
TGCGGATCGTGTGGTACTTGTTGGTGATCCCGCACGGGTTACAACCGTCGCTTCCTATTTTGATTCTCAGGAATGTGAGG
TTTCCAGCCGGGAGTTTCATACCATCACGGGCCAGTACAAGGGAAAACGTATCACGGTTGTATCCCATGGCATCGGCACA
GATAATATCGATATCGTATTAAATGAGCTAGACGCTCTCGCTAATATAGACTTCTCAACCCGTACGATCAAGCCGGAATT
CAAGCAACTTTCCCTGGTTCGTATCGGGACTTCCGGAGGGTTACAGCCATTTGTCCCGATCGGGACTTATGTGGCAGCGG
AGAAATCGATCGGATTCGACGGGGTCATTTATTTCTACGCAAATAGTAATACCGTTCGTGACGCAGACTTGGAGTCTGAA
TTAATAAAGCAGCTTGATTGGCGGCTTAGCGGCATATGGCCTTATGTCGTATCGGCAGATCCATCGTTGATCGAGCAAAT
CACCCGTAATGATATTATCCGGGGAACGACTATTGCGGCCAATGGCTTCTACGGGCCGCAAGGACGTGAGCTCCGATTGC
CCTTGACCGATCCGGAATTGAACCGGAAAATAGAGGCTTTCGATTACAACGGGCGAAAGATTACGAACTTCGAGATGGAG
AGCTCCTCTTTAGCAGGTCTGGCCGCCCTTATGGGACACCGGGCAATGACCGTATGCTGTATTATCGCCGGACGTGTGGA
TAATCATATGAATACGGATTATAAAGGTTCTTTGGAGAAACTGATTGAAACTGTATTAGACCGTATATAA

Upstream 100 bases:

>100_bases
AAAGGACTAAAATAGTTATATAAATAGAACTATCTCCAAGGGCAGGGTTCATACCTTGCCCTTTCATGATTATAATATAA
ACTTAATTATCTGATTGAAT

Downstream 100 bases:

>100_bases
TAATATCAAGACCATGAAGTGGGATCATTCATTAATCGATACGTTGGAATGGGGAAATCAGATCTCCCATAAGGAAGATA
AAATAAAGATAGCGGATCTT

Product: phosphorylase family protein

Products: NA

Alternate protein names: UPase; UrdPase [H]

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MRTIPASELVIHSDGSVFHLHLKPEQLADRVVLVGDPARVTTVASYFDSQECEVSSREFHTITGQYKGKRITVVSHGIGT
DNIDIVLNELDALANIDFSTRTIKPEFKQLSLVRIGTSGGLQPFVPIGTYVAAEKSIGFDGVIYFYANSNTVRDADLESE
LIKQLDWRLSGIWPYVVSADPSLIEQITRNDIIRGTTIAANGFYGPQGRELRLPLTDPELNRKIEAFDYNGRKITNFEME
SSSLAGLAALMGHRAMTVCCIIAGRVDNHMNTDYKGSLEKLIETVLDRI

Sequences:

>Translated_289_residues
MRTIPASELVIHSDGSVFHLHLKPEQLADRVVLVGDPARVTTVASYFDSQECEVSSREFHTITGQYKGKRITVVSHGIGT
DNIDIVLNELDALANIDFSTRTIKPEFKQLSLVRIGTSGGLQPFVPIGTYVAAEKSIGFDGVIYFYANSNTVRDADLESE
LIKQLDWRLSGIWPYVVSADPSLIEQITRNDIIRGTTIAANGFYGPQGRELRLPLTDPELNRKIEAFDYNGRKITNFEME
SSSLAGLAALMGHRAMTVCCIIAGRVDNHMNTDYKGSLEKLIETVLDRI
>Mature_289_residues
MRTIPASELVIHSDGSVFHLHLKPEQLADRVVLVGDPARVTTVASYFDSQECEVSSREFHTITGQYKGKRITVVSHGIGT
DNIDIVLNELDALANIDFSTRTIKPEFKQLSLVRIGTSGGLQPFVPIGTYVAAEKSIGFDGVIYFYANSNTVRDADLESE
LIKQLDWRLSGIWPYVVSADPSLIEQITRNDIIRGTTIAANGFYGPQGRELRLPLTDPELNRKIEAFDYNGRKITNFEME
SSSLAGLAALMGHRAMTVCCIIAGRVDNHMNTDYKGSLEKLIETVLDRI

Specific function: Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synth

COG id: COG2820

COG function: function code F; Uridine phosphorylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family [H]

Homologues:

Organism=Escherichia coli, GI1790265, Length=265, Percent_Identity=26.7924528301887, Blast_Score=74, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018017
- InterPro:   IPR018016
- InterPro:   IPR000845
- InterPro:   IPR010058 [H]

Pfam domain/function: PF01048 PNP_UDP_1 [H]

EC number: =2.4.2.3 [H]

Molecular weight: Translated: 32021; Mature: 32021

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTIPASELVIHSDGSVFHLHLKPEQLADRVVLVGDPARVTTVASYFDSQECEVSSREFH
CCCCCCCCEEEECCCCEEEEEECHHHHHCEEEEEECCHHHHHHHHHHCCCCCCCCCCEEE
TITGQYKGKRITVVSHGIGTDNIDIVLNELDALANIDFSTRTIKPEFKQLSLVRIGTSGG
EEECCCCCCEEEEEECCCCCCCCEEEEEHHHHHHCCCCCCEECCCCHHEEEEEEECCCCC
LQPFVPIGTYVAAEKSIGFDGVIYFYANSNTVRDADLESELIKQLDWRLSGIWPYVVSAD
CCCCCCCCEEEEECCCCCCCEEEEEEECCCEEECCHHHHHHHHHHCCHHCCCCEEEEECC
PSLIEQITRNDIIRGTTIAANGFYGPQGRELRLPLTDPELNRKIEAFDYNGRKITNFEME
HHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCCCHHHCCEEEEEECCCCEEEEEEEC
SSSLAGLAALMGHRAMTVCCIIAGRVDNHMNTDYKGSLEKLIETVLDRI
CCHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MRTIPASELVIHSDGSVFHLHLKPEQLADRVVLVGDPARVTTVASYFDSQECEVSSREFH
CCCCCCCCEEEECCCCEEEEEECHHHHHCEEEEEECCHHHHHHHHHHCCCCCCCCCCEEE
TITGQYKGKRITVVSHGIGTDNIDIVLNELDALANIDFSTRTIKPEFKQLSLVRIGTSGG
EEECCCCCCEEEEEECCCCCCCCEEEEEHHHHHHCCCCCCEECCCCHHEEEEEEECCCCC
LQPFVPIGTYVAAEKSIGFDGVIYFYANSNTVRDADLESELIKQLDWRLSGIWPYVVSAD
CCCCCCCCEEEEECCCCCCCEEEEEEECCCEEECCHHHHHHHHHHCCHHCCCCEEEEECC
PSLIEQITRNDIIRGTTIAANGFYGPQGRELRLPLTDPELNRKIEAFDYNGRKITNFEME
HHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCCCHHHCCEEEEEECCCCEEEEEEEC
SSSLAGLAALMGHRAMTVCCIIAGRVDNHMNTDYKGSLEKLIETVLDRI
CCHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]