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The map label for this gene is yjhC [C]

Identifier: 150008657

GI number: 150008657

Start: 2412352

End: 2413800

Strand: Reverse

Name: yjhC [C]

Synonym: BDI_2047

Alternate gene names: 150008657

Gene position: 2413800-2412352 (Counterclockwise)

Preceding gene: 150008658

Following gene: 150008656

Centisome position: 50.17

GC content: 47.69

Gene sequence:

>1449_bases
ATGAAAGAAAACACTAAGAAGGGCGTAAGCCGTAGAGAGTTTTTGGGTCTTTCCGCACTAGGATTGGCTAGTTTAACAAT
TCTTCCCAGTTGGGCCATTGATGGAGTCCGTATCGCCCCGAGCGATCGAGTCGTTTTAGGTTTTATCGGCCTAGGTCAGC
AAGCATTATCAGACTTTAAAGGATTTGCCGCATGTCCGGGCGTACAGGTTGCCGCATGTTGTGACGTGGACACGATGAAA
ACAGAGCGTTTCAGAAGACGTGTCGCTGAATGGCAAGCCTCAAAGGGAATGAACCAACGTTGTGATCAATATGAGTTTTA
CGAGGATTTGCTGGAGCGTAAGGATATCGACGCTATCGAGGTCGCTACCCCGGACCACTGGCATGCCTTGGCTACCATTC
ATTCTTGTCAATCTGGAAAAGACGTATATTGTCAGAAACCGTTGGCTTATACGATCGCTGAAGGTTTGGCTATGGTAAAA
GCCGTACGTAATAATAAACGTGTGCTTCAAGTAGGTAGCCAGCAACGTTCCAGCAGAGAGTTCCAAGCTGCGATCGATAT
GGTTCAGAATGGAGCCATTGGTCATATAGAGAAAATATATGCACGTGTAGGTGAGCCTCCTACGCCGCTGAGCTTGCCGG
AAATGCCGGTTCCCGCTAATTTGAACTTCAATCAGTGGATGGGGCCGTTGAACGATCCGAAGATCCATTATCATCCCGAT
TTATGTCCTCCTATTTCTCTGGATCCGGAAGAGAACGAGAAACTATGGGGCGCATGGCGTTGGTATCAAGAGACCGGTAA
TGGTTATACCGCTGACTGGGGCGCTCATATGTTCGATATCGCCCAAGCCGCTATCGGTATGGATGGCTCTGGTCCGGTAG
AGTTTACACCTAAGGGATACAATGGCACGCAATATTCAACCATGCGCTATGCGAATGGTATCGTAATGACTGAACAACCT
TATTTGGAGGATAATCCGGATGCGCAGGGTATTAAGTTTGTTGGTGATAACGGTTGGATCGAGGTAGCTCGTGGCTACAT
CAACTGCTCTGATCAGTCTAAGATCCCCGCCGACTTGAAGAATTTGATCGAGAAGCGCCCGAGAATGATGACTCCGGAAG
AGCGTAAGAAGATGTATGAGGAATATATGAAGAAGCTGAAAGACAGCAAAAAGAAGGGTAACGATGCGGGTAATTATGAG
ACTAGTGCTCCGCATATGCAGAACTTCATCGACTGCGTTCGTTCACGTGAGAACCCGATCGCTCCGGTTGAGGTAGGTTG
CAGTACGAATACGCTTTGTTGCTTACAGAATATCGCTCGTGAGCTAGGCCGTCCGGTTAAATGGAACCCGGCTACATTAA
GCTTCGGTAATGATAAGGAGGCGGCTTCCCACCGTTTGTACTGGTATCAATATCGCAACCCGTATTCATTGCCTTATTTC
TGTAAATAA

Upstream 100 bases:

>100_bases
TATTAAAAGATTATTATGGAAATAAATTATTTTTTATAACTTTGGGGCAATCATTCTCAGACCAAGTTACATTTTATCTT
ATATTATTAACAAAATTACC

Downstream 100 bases:

>100_bases
GCCTATTTAAATAGAATGATGTTATGAGTAACAGACGGGATTTCTTAAAAAATATCTCTCTCTTTACCGCTGGTGGATTG
CTGGCTGGTAAAGCCGGTTC

Product: putative NADH-dependent dyhydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MKENTKKGVSRREFLGLSALGLASLTILPSWAIDGVRIAPSDRVVLGFIGLGQQALSDFKGFAACPGVQVAACCDVDTMK
TERFRRRVAEWQASKGMNQRCDQYEFYEDLLERKDIDAIEVATPDHWHALATIHSCQSGKDVYCQKPLAYTIAEGLAMVK
AVRNNKRVLQVGSQQRSSREFQAAIDMVQNGAIGHIEKIYARVGEPPTPLSLPEMPVPANLNFNQWMGPLNDPKIHYHPD
LCPPISLDPEENEKLWGAWRWYQETGNGYTADWGAHMFDIAQAAIGMDGSGPVEFTPKGYNGTQYSTMRYANGIVMTEQP
YLEDNPDAQGIKFVGDNGWIEVARGYINCSDQSKIPADLKNLIEKRPRMMTPEERKKMYEEYMKKLKDSKKKGNDAGNYE
TSAPHMQNFIDCVRSRENPIAPVEVGCSTNTLCCLQNIARELGRPVKWNPATLSFGNDKEAASHRLYWYQYRNPYSLPYF
CK

Sequences:

>Translated_482_residues
MKENTKKGVSRREFLGLSALGLASLTILPSWAIDGVRIAPSDRVVLGFIGLGQQALSDFKGFAACPGVQVAACCDVDTMK
TERFRRRVAEWQASKGMNQRCDQYEFYEDLLERKDIDAIEVATPDHWHALATIHSCQSGKDVYCQKPLAYTIAEGLAMVK
AVRNNKRVLQVGSQQRSSREFQAAIDMVQNGAIGHIEKIYARVGEPPTPLSLPEMPVPANLNFNQWMGPLNDPKIHYHPD
LCPPISLDPEENEKLWGAWRWYQETGNGYTADWGAHMFDIAQAAIGMDGSGPVEFTPKGYNGTQYSTMRYANGIVMTEQP
YLEDNPDAQGIKFVGDNGWIEVARGYINCSDQSKIPADLKNLIEKRPRMMTPEERKKMYEEYMKKLKDSKKKGNDAGNYE
TSAPHMQNFIDCVRSRENPIAPVEVGCSTNTLCCLQNIARELGRPVKWNPATLSFGNDKEAASHRLYWYQYRNPYSLPYF
CK
>Mature_482_residues
MKENTKKGVSRREFLGLSALGLASLTILPSWAIDGVRIAPSDRVVLGFIGLGQQALSDFKGFAACPGVQVAACCDVDTMK
TERFRRRVAEWQASKGMNQRCDQYEFYEDLLERKDIDAIEVATPDHWHALATIHSCQSGKDVYCQKPLAYTIAEGLAMVK
AVRNNKRVLQVGSQQRSSREFQAAIDMVQNGAIGHIEKIYARVGEPPTPLSLPEMPVPANLNFNQWMGPLNDPKIHYHPD
LCPPISLDPEENEKLWGAWRWYQETGNGYTADWGAHMFDIAQAAIGMDGSGPVEFTPKGYNGTQYSTMRYANGIVMTEQP
YLEDNPDAQGIKFVGDNGWIEVARGYINCSDQSKIPADLKNLIEKRPRMMTPEERKKMYEEYMKKLKDSKKKGNDAGNYE
TSAPHMQNFIDCVRSRENPIAPVEVGCSTNTLCCLQNIARELGRPVKWNPATLSFGNDKEAASHRLYWYQYRNPYSLPYF
CK

Specific function: Glycosidase [H]

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family. Glycosyl hydrolase 109 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR006311 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 54319; Mature: 54319

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKENTKKGVSRREFLGLSALGLASLTILPSWAIDGVRIAPSDRVVLGFIGLGQQALSDFK
CCCCCHHCCCHHHHHCHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHC
GFAACPGVQVAACCDVDTMKTERFRRRVAEWQASKGMNQRCDQYEFYEDLLERKDIDAIE
CHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEE
VATPDHWHALATIHSCQSGKDVYCQKPLAYTIAEGLAMVKAVRNNKRVLQVGSQQRSSRE
ECCCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHH
FQAAIDMVQNGAIGHIEKIYARVGEPPTPLSLPEMPVPANLNFNQWMGPLNDPKIHYHPD
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCC
LCPPISLDPEENEKLWGAWRWYQETGNGYTADWGAHMFDIAQAAIGMDGSGPVEFTPKGY
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCC
NGTQYSTMRYANGIVMTEQPYLEDNPDAQGIKFVGDNGWIEVARGYINCSDQSKIPADLK
CCCCCCHHHHHCCEEEECCCCCCCCCCCCCEEEECCCCEEEEECCEECCCCCCCCCHHHH
NLIEKRPRMMTPEERKKMYEEYMKKLKDSKKKGNDAGNYETSAPHMQNFIDCVRSRENPI
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
APVEVGCSTNTLCCLQNIARELGRPVKWNPATLSFGNDKEAASHRLYWYQYRNPYSLPYF
CCEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHCCEEEEEECCCCCCCCC
CK
CC
>Mature Secondary Structure
MKENTKKGVSRREFLGLSALGLASLTILPSWAIDGVRIAPSDRVVLGFIGLGQQALSDFK
CCCCCHHCCCHHHHHCHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHC
GFAACPGVQVAACCDVDTMKTERFRRRVAEWQASKGMNQRCDQYEFYEDLLERKDIDAIE
CHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEE
VATPDHWHALATIHSCQSGKDVYCQKPLAYTIAEGLAMVKAVRNNKRVLQVGSQQRSSRE
ECCCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHH
FQAAIDMVQNGAIGHIEKIYARVGEPPTPLSLPEMPVPANLNFNQWMGPLNDPKIHYHPD
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCC
LCPPISLDPEENEKLWGAWRWYQETGNGYTADWGAHMFDIAQAAIGMDGSGPVEFTPKGY
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCC
NGTQYSTMRYANGIVMTEQPYLEDNPDAQGIKFVGDNGWIEVARGYINCSDQSKIPADLK
CCCCCCHHHHHCCEEEECCCCCCCCCCCCCEEEECCCCEEEEECCEECCCCCCCCCHHHH
NLIEKRPRMMTPEERKKMYEEYMKKLKDSKKKGNDAGNYETSAPHMQNFIDCVRSRENPI
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
APVEVGCSTNTLCCLQNIARELGRPVKWNPATLSFGNDKEAASHRLYWYQYRNPYSLPYF
CCEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHCCEEEEEECCCCCCCCC
CK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA