| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008656
Identifier: 150008656
GI number: 150008656
Start: 2411324
End: 2412328
Strand: Reverse
Name: 150008656
Synonym: BDI_2046
Alternate gene names: NA
Gene position: 2412328-2411324 (Counterclockwise)
Preceding gene: 150008657
Following gene: 150008655
Centisome position: 50.14
GC content: 45.47
Gene sequence:
>1005_bases ATGAGTAACAGACGGGATTTCTTAAAAAATATCTCTCTCTTTACCGCTGGTGGATTGCTGGCTGGTAAAGCCGGTTCCGT AAATGCGGCGAACGCTGCGTTGGGAGTTGTGGATGAGGTCCATGCCGGCAAAGAGATTGGCTTGCAGATCTATTCTTTAT CCCAAGAATTATATAAAGGCGACGTGGCCGCTAATCTTCGGAAGGTGAAGGATATGGGATACTCCAAGCTGGAGTTGGCG GGTTATGGTAAAGGCGCTATCGGAGGTGTTCCTATGATGGACTTCAAGAAAATGGCGGAAGACGCTGGCTTGAAGATCAT TAGCTCGCACGTGAATCCGGTAGACACATCTATCTCTGACCCTTTTAAGGCTATGATTTTCAAATACTCGAAGGAGGTTA CCCCAAAGATCATGGAGTATTGGAAAGCTACGGCTGCCGATCATGCGAAACTAGGCTGTAAATATTTGATCCAGCCGATG ATGCCGACGATTACTACGCACGATGAGGCTAAACTTGTTTGCGATATCTTCAATCAGGCCTCGGATGTTATCAAGGCAGA GGGCATCGCCACTGGTTTTGGCTATCATAATCATAATATGGAGTTCAATCGTGTCGCAACGAAAGAGCAACAGGAGAAAG TGAAGGGAAATCCTTTCGCTGCCTTCATGAAAGTCGGAGACCAGATTTATGACTTGATGCTGAAAGATACGGACCCGAGC AAGGTTTACTTCGAGATGGATGTTTATTGGACTGTCATGGGACAAAACGATCCTGTCGAGTATATGCAGAAACATCCGGA TCGTATCAAGGTATTACATATCAAGGATCGTGCCGTATTCGGCCAAAGTGGTATGATGAACTTTGAGATGATATTCAAGC AAATGTACGCGAACGGAATCAAAGACTATTTTGTAGAGTTGGAGCAAATGCCGGACGGACGTACTCAATTTGCGGGTGTG AAGGATTGTGCCGACTATTTGATCAAGGCTCCTTTTGTAAAATGA
Upstream 100 bases:
>100_bases ATAAGGAGGCGGCTTCCCACCGTTTGTACTGGTATCAATATCGCAACCCGTATTCATTGCCTTATTTCTGTAAATAAGCC TATTTAAATAGAATGATGTT
Downstream 100 bases:
>100_bases AGTAACAATCGATAGATCGTAAGCCTCGGGGTTAATAAACTCCGGGGCTTTTTTATTAGATGAAAGGCAACATAAACGGG TCTATTTTGTTTTTATAAAA
Product: sugar phosphate isomerase/epimerase
Products: NA
Alternate protein names: Sugar Phosphate Isomerase/Epimerase; Xylose Isomerase Domain-Containing Protein; Xylose Isomerase DomaiN-Containing Protein Tim Barrel; Twin-Arginine Translocation Pathway Signal; Xylose Isomerase Domain-Containing Protein TIM Barrel; Sugar Phosphate Isomerase / Epimerase; Sugar Phosphate Isomerases/Epimerases; Xylose Isomerase Family Protein; Xylose Isomerase Domain-Containing Protein Tim Barrel
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSNRRDFLKNISLFTAGGLLAGKAGSVNAANAALGVVDEVHAGKEIGLQIYSLSQELYKGDVAANLRKVKDMGYSKLELA GYGKGAIGGVPMMDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQPM MPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYHNHNMEFNRVATKEQQEKVKGNPFAAFMKVGDQIYDLMLKDTDPS KVYFEMDVYWTVMGQNDPVEYMQKHPDRIKVLHIKDRAVFGQSGMMNFEMIFKQMYANGIKDYFVELEQMPDGRTQFAGV KDCADYLIKAPFVK
Sequences:
>Translated_334_residues MSNRRDFLKNISLFTAGGLLAGKAGSVNAANAALGVVDEVHAGKEIGLQIYSLSQELYKGDVAANLRKVKDMGYSKLELA GYGKGAIGGVPMMDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQPM MPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYHNHNMEFNRVATKEQQEKVKGNPFAAFMKVGDQIYDLMLKDTDPS KVYFEMDVYWTVMGQNDPVEYMQKHPDRIKVLHIKDRAVFGQSGMMNFEMIFKQMYANGIKDYFVELEQMPDGRTQFAGV KDCADYLIKAPFVK >Mature_333_residues SNRRDFLKNISLFTAGGLLAGKAGSVNAANAALGVVDEVHAGKEIGLQIYSLSQELYKGDVAANLRKVKDMGYSKLELAG YGKGAIGGVPMMDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQPMM PTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYHNHNMEFNRVATKEQQEKVKGNPFAAFMKVGDQIYDLMLKDTDPSK VYFEMDVYWTVMGQNDPVEYMQKHPDRIKVLHIKDRAVFGQSGMMNFEMIFKQMYANGIKDYFVELEQMPDGRTQFAGVK DCADYLIKAPFVK
Specific function: Unknown
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37290; Mature: 37158
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRRDFLKNISLFTAGGLLAGKAGSVNAANAALGVVDEVHAGKEIGLQIYSLSQELYKG CCCHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHCCHHHCEEHHHHHHHHHHC DVAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIISSHVNPVDTSISD HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEHHCCCCCCCCCCC PFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQA HHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH SDVIKAEGIATGFGYHNHNMEFNRVATKEQQEKVKGNPFAAFMKVGDQIYDLMLKDTDPS HHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC KVYFEMDVYWTVMGQNDPVEYMQKHPDRIKVLHIKDRAVFGQSGMMNFEMIFKQMYANGI EEEEEEEEEEEEECCCCCHHHHHCCCCEEEEEEEECCEEECCCCCHHHHHHHHHHHHCCH KDYFVELEQMPDGRTQFAGVKDCADYLIKAPFVK HHHHHHHHHCCCCCHHHCCHHHHHHHHHCCCCCC >Mature Secondary Structure SNRRDFLKNISLFTAGGLLAGKAGSVNAANAALGVVDEVHAGKEIGLQIYSLSQELYKG CCHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHCCHHHCEEHHHHHHHHHHC DVAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIISSHVNPVDTSISD HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEHHCCCCCCCCCCC PFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQA HHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH SDVIKAEGIATGFGYHNHNMEFNRVATKEQQEKVKGNPFAAFMKVGDQIYDLMLKDTDPS HHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC KVYFEMDVYWTVMGQNDPVEYMQKHPDRIKVLHIKDRAVFGQSGMMNFEMIFKQMYANGI EEEEEEEEEEEEECCCCCHHHHHCCCCEEEEEEEECCEEECCCCCHHHHHHHHHHHHCCH KDYFVELEQMPDGRTQFAGVKDCADYLIKAPFVK HHHHHHHHHCCCCCHHHCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA