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The map label for this gene is yfmR [H]

Identifier: 150008645

GI number: 150008645

Start: 2398549

End: 2400432

Strand: Reverse

Name: yfmR [H]

Synonym: BDI_2033

Alternate gene names: 150008645

Gene position: 2400432-2398549 (Counterclockwise)

Preceding gene: 150008649

Following gene: 150008644

Centisome position: 49.89

GC content: 48.78

Gene sequence:

>1884_bases
ATGATAAGTTACCTTCAGATAGATAAGCTGACCAAGAGCTTCGGTGATTTGGTTCTTTTCGAGGATATAACGTTCGGAGT
CGCGCAAGGACAGAAGATCGGGTTGATCGCCAAAAACGGGACGGGTAAGACTACCTTATTGAATATTATCGGTGGTAAGG
AGGATTACGACTCGGGTGAGGTGGTTTTCCGGAAAGACCTGCGGGTCGGGTATTTGGAGCAATCACCTTCTTATCCGGAA
GAACTGACCGTGCTACAGGCTTGCTTCCACTCGAAGAACGAGACTGTCCAGTTGATAGCTGAGTACGAGGAGGCGATGGC
GAAAGAGGATCACTCGAATCTGGAGGACATCCTTACCCGTATGGATAGCTTCAAGGCGTGGGATTATGAGCAAAAGGCGA
AACAAATCCTCGGGCAGTTGAAGATTCATAACTTCAATCAGAAGATCGGGGAATTGTCCGGAGGGCAGTTGAAACGGGTA
GCCTTGGCGAATGTCTTGATCACGGACCCTGAATTGATTATCTTGGATGAGCCGACGAACCATTTGGATCTGGAAATGAC
CGAGTGGCTGGAAGATTATCTGAGCCGGGCCAATATCAGTATCTTGATGGTGACGCACGACCGTTACTTCTTGGATCGTG
TTTGTAGTGAGATCATCGAGATCGATAATAAACAAATCTATTCGTATAAAGGTAATTATAGTTATTATCTGGAGAAACGC
CAAGAGCGTGTCGAGGCGATGAACGCCGACGTGGAGCGTGCGAAGAATCTTCTCCGTACGGAACTGGATTGGATGCGCCG
CCAGCCGCAGGCACGGGGCACGAAAGCGAAGTACCGTATCGATGCCTTTTATGAGCTGGAAAAGAAAGCGAAGCAACAAC
GGGATACTGGAAAGGTGAACTTGGACGTGAAGGCTTCTTACATCGGTTCGAAGATTTTCGAGGCGGTGAATGTAAGCAAA
CGTTTCGGTGATTTGAAGATTACGGAGGATTTCAACTATATTTTCGCCCGTTACGAGAAGATGGGTATTGTCGGGAATAA
CGGTACGGGCAAATCTACCTTTATCAAGATGCTGATGGGGGAGGTGGCTCCCGATAGCGGCCATTTCGATGTGGGCGAGA
CCGTTCGCTTTGGCTATTATAGTCAAGATGGCTTGAAGTTCGATGAGCAAATGAAAGTGATCGACGTGGTGCAGGCGATC
GCCGAATACGTGGATTTGGGTAACGGACAGAAGATGGGAGTGTCCCAGTTTTTGAACTATTTCCTGTTCACGCCGGAGAA
ACAGCATAATTACGTTTATAAATTGAGCGGTGGCGAGAAGCGTCGCCTCTATTTATGTACGGTATTGATGCGTAGCCCGA
ACTTCTTGGTGCTTGATGAGCCGACCAATGATCTGGATATCGTGACCTTGAACGTATTGGAGGAATACCTTCGTAACTTC
AAGGGGTGTGCTATCGTGGTTTCCCACGACCGTTACTTTATGGATAAGGTGGTAGATCACCTGCTGGTTTTCCGGGGTAA
CGCTGATATCAAGGATTTCCCCGGCAACTATACGCAGTACCGGGATTGGAAAGATGTGCAAGACCAACAGGAAAAAGAGG
CGGAGGCTGCTTTGCAAGCGAGACAAAACCCGGCTCCGGAGAAACCGTCTCGTCCTGTCAATGAGCAAAAGAAAAAACTC
ACTTTCAAGGAACGGAAAGAGTTCGAGGCCCTAGAGGAGGAGATACCGGCTTTGGAGGCGGAGAAGGCGGAGTTGGAGAC
CGCTATGAGCAGTGGTACTTTGTCTACGGACGAGCTTATGGCTAAATCTCAACGGATCACCCAAGTCATGGAAGAGATCG
ACGAGAAAACGATGCGCTGGCTGGAGTTGAGTGAGCTGGCATAA

Upstream 100 bases:

>100_bases
TGGTGTTTTTCTTATTCTTCCACCAAAGGTACGGAGAAAAGCTTAAAATTCGAGGATTTTGTGTAAGTTTGCCTTCCGAT
TTGAATTTAAATAAGAAAAC

Downstream 100 bases:

>100_bases
GTAATAAAGAGGAATGAGCGAGACTAAACCTGTACTTTGGAACCGGAATTTCGTCCAATGTTGTATCTCTTACTTCTTGA
TGAATTTCGCCTTTTATATG

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 627; Mature: 627

Protein sequence:

>627_residues
MISYLQIDKLTKSFGDLVLFEDITFGVAQGQKIGLIAKNGTGKTTLLNIIGGKEDYDSGEVVFRKDLRVGYLEQSPSYPE
ELTVLQACFHSKNETVQLIAEYEEAMAKEDHSNLEDILTRMDSFKAWDYEQKAKQILGQLKIHNFNQKIGELSGGQLKRV
ALANVLITDPELIILDEPTNHLDLEMTEWLEDYLSRANISILMVTHDRYFLDRVCSEIIEIDNKQIYSYKGNYSYYLEKR
QERVEAMNADVERAKNLLRTELDWMRRQPQARGTKAKYRIDAFYELEKKAKQQRDTGKVNLDVKASYIGSKIFEAVNVSK
RFGDLKITEDFNYIFARYEKMGIVGNNGTGKSTFIKMLMGEVAPDSGHFDVGETVRFGYYSQDGLKFDEQMKVIDVVQAI
AEYVDLGNGQKMGVSQFLNYFLFTPEKQHNYVYKLSGGEKRRLYLCTVLMRSPNFLVLDEPTNDLDIVTLNVLEEYLRNF
KGCAIVVSHDRYFMDKVVDHLLVFRGNADIKDFPGNYTQYRDWKDVQDQQEKEAEAALQARQNPAPEKPSRPVNEQKKKL
TFKERKEFEALEEEIPALEAEKAELETAMSSGTLSTDELMAKSQRITQVMEEIDEKTMRWLELSELA

Sequences:

>Translated_627_residues
MISYLQIDKLTKSFGDLVLFEDITFGVAQGQKIGLIAKNGTGKTTLLNIIGGKEDYDSGEVVFRKDLRVGYLEQSPSYPE
ELTVLQACFHSKNETVQLIAEYEEAMAKEDHSNLEDILTRMDSFKAWDYEQKAKQILGQLKIHNFNQKIGELSGGQLKRV
ALANVLITDPELIILDEPTNHLDLEMTEWLEDYLSRANISILMVTHDRYFLDRVCSEIIEIDNKQIYSYKGNYSYYLEKR
QERVEAMNADVERAKNLLRTELDWMRRQPQARGTKAKYRIDAFYELEKKAKQQRDTGKVNLDVKASYIGSKIFEAVNVSK
RFGDLKITEDFNYIFARYEKMGIVGNNGTGKSTFIKMLMGEVAPDSGHFDVGETVRFGYYSQDGLKFDEQMKVIDVVQAI
AEYVDLGNGQKMGVSQFLNYFLFTPEKQHNYVYKLSGGEKRRLYLCTVLMRSPNFLVLDEPTNDLDIVTLNVLEEYLRNF
KGCAIVVSHDRYFMDKVVDHLLVFRGNADIKDFPGNYTQYRDWKDVQDQQEKEAEAALQARQNPAPEKPSRPVNEQKKKL
TFKERKEFEALEEEIPALEAEKAELETAMSSGTLSTDELMAKSQRITQVMEEIDEKTMRWLELSELA
>Mature_627_residues
MISYLQIDKLTKSFGDLVLFEDITFGVAQGQKIGLIAKNGTGKTTLLNIIGGKEDYDSGEVVFRKDLRVGYLEQSPSYPE
ELTVLQACFHSKNETVQLIAEYEEAMAKEDHSNLEDILTRMDSFKAWDYEQKAKQILGQLKIHNFNQKIGELSGGQLKRV
ALANVLITDPELIILDEPTNHLDLEMTEWLEDYLSRANISILMVTHDRYFLDRVCSEIIEIDNKQIYSYKGNYSYYLEKR
QERVEAMNADVERAKNLLRTELDWMRRQPQARGTKAKYRIDAFYELEKKAKQQRDTGKVNLDVKASYIGSKIFEAVNVSK
RFGDLKITEDFNYIFARYEKMGIVGNNGTGKSTFIKMLMGEVAPDSGHFDVGETVRFGYYSQDGLKFDEQMKVIDVVQAI
AEYVDLGNGQKMGVSQFLNYFLFTPEKQHNYVYKLSGGEKRRLYLCTVLMRSPNFLVLDEPTNDLDIVTLNVLEEYLRNF
KGCAIVVSHDRYFMDKVVDHLLVFRGNADIKDFPGNYTQYRDWKDVQDQQEKEAEAALQARQNPAPEKPSRPVNEQKKKL
TFKERKEFEALEEEIPALEAEKAELETAMSSGTLSTDELMAKSQRITQVMEEIDEKTMRWLELSELA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=543, Percent_Identity=28.7292817679558, Blast_Score=200, Evalue=4e-51,
Organism=Homo sapiens, GI27881506, Length=536, Percent_Identity=28.544776119403, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI10947137, Length=536, Percent_Identity=28.544776119403, Blast_Score=170, Evalue=4e-42,
Organism=Homo sapiens, GI10947135, Length=547, Percent_Identity=27.2394881170018, Blast_Score=163, Evalue=5e-40,
Organism=Homo sapiens, GI69354671, Length=547, Percent_Identity=27.2394881170018, Blast_Score=163, Evalue=6e-40,
Organism=Escherichia coli, GI2367384, Length=519, Percent_Identity=34.4894026974952, Blast_Score=322, Evalue=5e-89,
Organism=Escherichia coli, GI1787182, Length=631, Percent_Identity=30.1109350237718, Blast_Score=294, Evalue=1e-80,
Organism=Escherichia coli, GI1789751, Length=643, Percent_Identity=30.7931570762053, Blast_Score=279, Evalue=3e-76,
Organism=Escherichia coli, GI1787041, Length=531, Percent_Identity=29.5668549905838, Blast_Score=241, Evalue=1e-64,
Organism=Escherichia coli, GI87081782, Length=543, Percent_Identity=23.9410681399632, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI1789672, Length=266, Percent_Identity=25.5639097744361, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI87081834, Length=225, Percent_Identity=26.2222222222222, Blast_Score=85, Evalue=2e-17,
Organism=Escherichia coli, GI87081791, Length=214, Percent_Identity=28.0373831775701, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1787029, Length=233, Percent_Identity=26.1802575107296, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1790467, Length=230, Percent_Identity=26.0869565217391, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1786703, Length=248, Percent_Identity=28.6290322580645, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1789891, Length=216, Percent_Identity=24.537037037037, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790739, Length=240, Percent_Identity=23.75, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1787370, Length=209, Percent_Identity=25.3588516746411, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789593, Length=231, Percent_Identity=24.2424242424242, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87082268, Length=181, Percent_Identity=26.5193370165746, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1786803, Length=242, Percent_Identity=25.2066115702479, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI87082267, Length=216, Percent_Identity=25.9259259259259, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI1786398, Length=213, Percent_Identity=23.4741784037559, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI48994883, Length=230, Percent_Identity=23.4782608695652, Blast_Score=63, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=540, Percent_Identity=27.2222222222222, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17555318, Length=550, Percent_Identity=28.1818181818182, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17553372, Length=541, Percent_Identity=26.6173752310536, Blast_Score=166, Evalue=5e-41,
Organism=Caenorhabditis elegans, GI71983516, Length=259, Percent_Identity=25.0965250965251, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71983510, Length=259, Percent_Identity=25.0965250965251, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71983523, Length=259, Percent_Identity=25.0965250965251, Blast_Score=72, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=552, Percent_Identity=28.804347826087, Blast_Score=200, Evalue=7e-52,
Organism=Saccharomyces cerevisiae, GI6321121, Length=534, Percent_Identity=27.9026217228464, Blast_Score=155, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6325030, Length=383, Percent_Identity=27.4151436031332, Blast_Score=133, Evalue=8e-32,
Organism=Saccharomyces cerevisiae, GI6324314, Length=378, Percent_Identity=25.6613756613757, Blast_Score=110, Evalue=9e-25,
Organism=Saccharomyces cerevisiae, GI6323278, Length=242, Percent_Identity=30.5785123966942, Blast_Score=107, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24641342, Length=550, Percent_Identity=29.4545454545455, Blast_Score=198, Evalue=8e-51,
Organism=Drosophila melanogaster, GI24666836, Length=533, Percent_Identity=27.7673545966229, Blast_Score=198, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24642252, Length=555, Percent_Identity=27.2072072072072, Blast_Score=186, Evalue=4e-47,
Organism=Drosophila melanogaster, GI18859989, Length=555, Percent_Identity=27.2072072072072, Blast_Score=186, Evalue=4e-47,
Organism=Drosophila melanogaster, GI85725262, Length=204, Percent_Identity=28.4313725490196, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI116007184, Length=202, Percent_Identity=28.7128712871287, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI221500365, Length=202, Percent_Identity=28.7128712871287, Blast_Score=70, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 72275; Mature: 72275

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISYLQIDKLTKSFGDLVLFEDITFGVAQGQKIGLIAKNGTGKTTLLNIIGGKEDYDSGE
CCCCHHHHHHHHHHCCEEEEEHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCC
VVFRKDLRVGYLEQSPSYPEELTVLQACFHSKNETVQLIAEYEEAMAKEDHSNLEDILTR
EEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
MDSFKAWDYEQKAKQILGQLKIHNFNQKIGELSGGQLKRVALANVLITDPELIILDEPTN
HHHCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHEEEECCCEEEEECCCC
HLDLEMTEWLEDYLSRANISILMVTHDRYFLDRVCSEIIEIDNKQIYSYKGNYSYYLEKR
CCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
QERVEAMNADVERAKNLLRTELDWMRRQPQARGTKAKYRIDAFYELEKKAKQQRDTGKVN
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEE
LDVKASYIGSKIFEAVNVSKRFGDLKITEDFNYIFARYEKMGIVGNNGTGKSTFIKMLMG
EEEEHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHEEECCCCCCHHHHHHHHHH
EVAPDSGHFDVGETVRFGYYSQDGLKFDEQMKVIDVVQAIAEYVDLGNGQKMGVSQFLNY
HCCCCCCCCCCCCCEEECEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
FLFTPEKQHNYVYKLSGGEKRRLYLCTVLMRSPNFLVLDEPTNDLDIVTLNVLEEYLRNF
HCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEEHHHHHHHHHCC
KGCAIVVSHDRYFMDKVVDHLLVFRGNADIKDFPGNYTQYRDWKDVQDQQEKEAEAALQA
CCEEEEEECCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RQNPAPEKPSRPVNEQKKKLTFKERKEFEALEEEIPALEAEKAELETAMSSGTLSTDELM
HCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHH
AKSQRITQVMEEIDEKTMRWLELSELA
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISYLQIDKLTKSFGDLVLFEDITFGVAQGQKIGLIAKNGTGKTTLLNIIGGKEDYDSGE
CCCCHHHHHHHHHHCCEEEEEHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCC
VVFRKDLRVGYLEQSPSYPEELTVLQACFHSKNETVQLIAEYEEAMAKEDHSNLEDILTR
EEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
MDSFKAWDYEQKAKQILGQLKIHNFNQKIGELSGGQLKRVALANVLITDPELIILDEPTN
HHHCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHEEEECCCEEEEECCCC
HLDLEMTEWLEDYLSRANISILMVTHDRYFLDRVCSEIIEIDNKQIYSYKGNYSYYLEKR
CCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH
QERVEAMNADVERAKNLLRTELDWMRRQPQARGTKAKYRIDAFYELEKKAKQQRDTGKVN
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEE
LDVKASYIGSKIFEAVNVSKRFGDLKITEDFNYIFARYEKMGIVGNNGTGKSTFIKMLMG
EEEEHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHEEECCCCCCHHHHHHHHHH
EVAPDSGHFDVGETVRFGYYSQDGLKFDEQMKVIDVVQAIAEYVDLGNGQKMGVSQFLNY
HCCCCCCCCCCCCCEEECEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
FLFTPEKQHNYVYKLSGGEKRRLYLCTVLMRSPNFLVLDEPTNDLDIVTLNVLEEYLRNF
HCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEEHHHHHHHHHCC
KGCAIVVSHDRYFMDKVVDHLLVFRGNADIKDFPGNYTQYRDWKDVQDQQEKEAEAALQA
CCEEEEEECCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RQNPAPEKPSRPVNEQKKKLTFKERKEFEALEEEIPALEAEKAELETAMSSGTLSTDELM
HCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHH
AKSQRITQVMEEIDEKTMRWLELSELA
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]