| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is ywoG [H]
Identifier: 150008644
GI number: 150008644
Start: 2397360
End: 2398535
Strand: Reverse
Name: ywoG [H]
Synonym: BDI_2032
Alternate gene names: 150008644
Gene position: 2398535-2397360 (Counterclockwise)
Preceding gene: 150008645
Following gene: 150008643
Centisome position: 49.85
GC content: 50.51
Gene sequence:
>1176_bases ATGAGCGAGACTAAACCTGTACTTTGGAACCGGAATTTCGTCCAATGTTGTATCTCTTACTTCTTGATGAATTTCGCCTT TTATATGTTGATGCCTACTATGCCGGTCTATCTGGTGGAAGAGTTGGGCATCAGCACGTCCGAGGTGGGGATGGTCTTGT CTAGCTATACGATCGGGTTGCTGTGCGTGCGCCCGTTCTCGGGATATCTGGTGGATTGTTTCTCCCGCAAACCGTTATAT GTATTCGCCTTCACGATATTCGCCTGTTTGTTTGCCGGTTATTGGTTTGCTATGACAGTCTATACGATCATGGCGGTTCG TTTCATCCAAGGCGGGTTTATGGGACTGACCTCAGTCTCTGGCAATACGATTACGATAGACGTGATCCCTTCCAAGCGAA GAGGAGAGGGCATGGGCTTTTACGGATTGACGATCAATCTCGCCATGTCTTTGGCTCCTTTGGTGGCGGTCGGGCTGTAC GATCGGCATGGTTTCTTCTGGATCATAGGGGTCGCTTTGGTGATCGCATTGGTCGGGATCGGCTCCGTCGGGCTGATCTG TTATCCGAAACGGGAGAAAGTGCCTCGTCCGGCCTTCTCGTTGGATCGTTTTATCTTGGTAAAAGCGCTTCCTGCGGCCT TGGCCTATTTGCTGGTCGCTATACCTTATGGGATGTTGCTCTCGTTCGTGGTATTATATGGTAAAGAGATCGAGGTGCCG AACCCAGGCTATTTCTTTATATGTATGGCGATCGGTGTAGGGACGGCCCGTTTGATTTCCGGACGGTTGGTGGACCATGG CAAGATCCATGTCGTGTCCATCGTATCCTTGGTCTCTTTAGCGATCTCGTTTTCCGTGTTCGCTACCGTACATACATCAT TTGTCTTTTTCGCTTGCGCCTTGGCGATCGGTATCGGTTTTGGCGTGAGTGTACCGGCTTTTCAATGTCTTTTCGTGAAT GTCGCTCCGCACCATATGCGCGGTACGGCCACTTCTACCTACTTGACCTCTTTCGATTTCGGGATGGGGATCGGGATGCT GTCCGCCGGCTTTATCGCTACCCATACCAATCTGGCTACCGCCTACGGAGTCGGGGCGGTTTGTTGCCTTCTTTCCTTAT TCGTCTATATCCGCTTGGTAAAAGCCTCGTACGAGAGGAATAAGCTGATTTCTTGA
Upstream 100 bases:
>100_bases ATGGCTAAATCTCAACGGATCACCCAAGTCATGGAAGAGATCGACGAGAAAACGATGCGCTGGCTGGAGTTGAGTGAGCT GGCATAAGTAATAAAGAGGA
Downstream 100 bases:
>100_bases TCCGCTTGATTCCCGGTTTCGTCTAAACCTACGGCGTACTTCGTCGATTCTTCCTTTTCTAGCGGGAAACCTCACCCTAT ATTTGTATCAAAGATCACAG
Product: putative transmembrane transport protein
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MSETKPVLWNRNFVQCCISYFLMNFAFYMLMPTMPVYLVEELGISTSEVGMVLSSYTIGLLCVRPFSGYLVDCFSRKPLY VFAFTIFACLFAGYWFAMTVYTIMAVRFIQGGFMGLTSVSGNTITIDVIPSKRRGEGMGFYGLTINLAMSLAPLVAVGLY DRHGFFWIIGVALVIALVGIGSVGLICYPKREKVPRPAFSLDRFILVKALPAALAYLLVAIPYGMLLSFVVLYGKEIEVP NPGYFFICMAIGVGTARLISGRLVDHGKIHVVSIVSLVSLAISFSVFATVHTSFVFFACALAIGIGFGVSVPAFQCLFVN VAPHHMRGTATSTYLTSFDFGMGIGMLSAGFIATHTNLATAYGVGAVCCLLSLFVYIRLVKASYERNKLIS
Sequences:
>Translated_391_residues MSETKPVLWNRNFVQCCISYFLMNFAFYMLMPTMPVYLVEELGISTSEVGMVLSSYTIGLLCVRPFSGYLVDCFSRKPLY VFAFTIFACLFAGYWFAMTVYTIMAVRFIQGGFMGLTSVSGNTITIDVIPSKRRGEGMGFYGLTINLAMSLAPLVAVGLY DRHGFFWIIGVALVIALVGIGSVGLICYPKREKVPRPAFSLDRFILVKALPAALAYLLVAIPYGMLLSFVVLYGKEIEVP NPGYFFICMAIGVGTARLISGRLVDHGKIHVVSIVSLVSLAISFSVFATVHTSFVFFACALAIGIGFGVSVPAFQCLFVN VAPHHMRGTATSTYLTSFDFGMGIGMLSAGFIATHTNLATAYGVGAVCCLLSLFVYIRLVKASYERNKLIS >Mature_390_residues SETKPVLWNRNFVQCCISYFLMNFAFYMLMPTMPVYLVEELGISTSEVGMVLSSYTIGLLCVRPFSGYLVDCFSRKPLYV FAFTIFACLFAGYWFAMTVYTIMAVRFIQGGFMGLTSVSGNTITIDVIPSKRRGEGMGFYGLTINLAMSLAPLVAVGLYD RHGFFWIIGVALVIALVGIGSVGLICYPKREKVPRPAFSLDRFILVKALPAALAYLLVAIPYGMLLSFVVLYGKEIEVPN PGYFFICMAIGVGTARLISGRLVDHGKIHVVSIVSLVSLAISFSVFATVHTSFVFFACALAIGIGFGVSVPAFQCLFVNV APHHMRGTATSTYLTSFDFGMGIGMLSAGFIATHTNLATAYGVGAVCCLLSLFVYIRLVKASYERNKLIS
Specific function: Involved In Sulfonamide (Sulfathiazole) And Bicyclomycin Resistance. Probable Membrane Translocase. [C]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42642; Mature: 42511
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETKPVLWNRNFVQCCISYFLMNFAFYMLMPTMPVYLVEELGISTSEVGMVLSSYTIGL CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHEEE LCVRPFSGYLVDCFSRKPLYVFAFTIFACLFAGYWFAMTVYTIMAVRFIQGGFMGLTSVS EEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC GNTITIDVIPSKRRGEGMGFYGLTINLAMSLAPLVAVGLYDRHGFFWIIGVALVIALVGI CCEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC GSVGLICYPKREKVPRPAFSLDRFILVKALPAALAYLLVAIPYGMLLSFVVLYGKEIEVP CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCC NPGYFFICMAIGVGTARLISGRLVDHGKIHVVSIVSLVSLAISFSVFATVHTSFVFFACA CCCEEEEEEEHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAIGIGFGVSVPAFQCLFVNVAPHHMRGTATSTYLTSFDFGMGIGMLSAGFIATHTNLAT HHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHCCHHHCCCCHHH AYGVGAVCCLLSLFVYIRLVKASYERNKLIS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SETKPVLWNRNFVQCCISYFLMNFAFYMLMPTMPVYLVEELGISTSEVGMVLSSYTIGL CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHEEE LCVRPFSGYLVDCFSRKPLYVFAFTIFACLFAGYWFAMTVYTIMAVRFIQGGFMGLTSVS EEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC GNTITIDVIPSKRRGEGMGFYGLTINLAMSLAPLVAVGLYDRHGFFWIIGVALVIALVGI CCEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC GSVGLICYPKREKVPRPAFSLDRFILVKALPAALAYLLVAIPYGMLLSFVVLYGKEIEVP CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCC NPGYFFICMAIGVGTARLISGRLVDHGKIHVVSIVSLVSLAISFSVFATVHTSFVFFACA CCCEEEEEEEHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAIGIGFGVSVPAFQCLFVNVAPHHMRGTATSTYLTSFDFGMGIGMLSAGFIATHTNLAT HHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHCCHHHCCCCHHH AYGVGAVCCLLSLFVYIRLVKASYERNKLIS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]