| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008620
Identifier: 150008620
GI number: 150008620
Start: 2374664
End: 2376046
Strand: Reverse
Name: 150008620
Synonym: BDI_2006
Alternate gene names: NA
Gene position: 2376046-2374664 (Counterclockwise)
Preceding gene: 150008627
Following gene: 150008617
Centisome position: 49.38
GC content: 45.12
Gene sequence:
>1383_bases ATGAAGAAAAAAGTAGTATTAGGTGCGGCATTGATGATGATGCCTTTGGTTTCTTTCGCTGGAGGATATTTGACGAATAC GAATCAGCATGCAGCCTTTTTAAGGTCACTTTCGCGAGGTGCTGCAATTGATATAGACGGCGCTTTGTCAAACCCGGCGG GTCTTTCTTTTTTGCCGACAGACGGTTTCCGCGTTGGTGTGAGTATCCAAAGTGCTTTCCAGACCCGGGATATCGATGCC TCTTTCAGTACATACAATGGTTTCGACCCAGTGAATAAGGTGCCGACAGTGAGCGACGTTCCCTATAAAAAGTATTACAA AGGAAAGGCAGCCGCTCCCGTGATTCCGAGTGTTTTTGCGGCTTACAAAAAAGGTGATTGGACGATCTCCGGTTTCTTTG CCATTACGGGTGGAGGTGGTAAGGCTTCGTTTGACGATGGTCTGCCAATGTTCGAATCGGCTGCTATGGCCGGTATCTTC AAGGAAAGTGTAGCGAAATATATAAAGACTGGCGGTCAAAGTCCCATCGTCACGCCGGATATGTATACTATTAACAGTGC GATGGACGGAAAACAGTATATTTATTCCCTACAACTTGGCCTATCATACAAGATCACGGATTGGCTTTCTGCCTTTGCCG GTGGCCGGATGAACTATTTCTCAGGAAACTATGACGGGTATCTGGATGCAAAATTAAAACAGAATTTTGGTGGAGCGGAT TTAATGAACCTGGCTTTGGATTGCGACCAGACAGGTTGGGGGTTGACACCGGTTTTGGGTGTCGATGTCAAATATGGTAA ATTCAATTTCGGAGCTAAATATGAGTTTAAGACGAACTTGAACATCGAAAACAATACCAAGAAGTTGGATTATCCCGACA GTGCGGAAGGTTTGGTTGGCCCTTATAAGCATGGTGTAAATACGCCGAACGATATTCCTTCCATGCTTTCGGTGGCAGCT TCTTATCGGTTTTTGCCCATGTTGAAGGCTTCTGTTGAGTATCACTTCTTCGATGATAAGAAGGCGGGAATGGCCGGTGG AAAGCAGAAGGAACTGGAAAGAGGTACGAATGAGTATCTGTTTGGTATAGAGTGGGATGTTGTCAAGAGATTGACCATTA GCGGTGGCGCTCAAATTACAGATTATGGTTTGTCTGATAATTTCCAAAGTGATGTTAGTTTCTCCTGCGATTCTTATTCG CTGGGCTTTGGTGCTAAAGTGATGTTGAGCGAAAAAATGGCTTTGAACGTGGGATATATGTGGACAACTTACCACGATTA TACCAAGAAGATGGACAACTACTGCGGCACGGGACTTCCTGGGCAGAATGTGTATAGCCGCACCAACAAGGTGTTCGGAT TAAGTTTGGACTACGCTTTCTAA
Upstream 100 bases:
>100_bases AGTATTTGCTGTTTTGTGCGGCACATTTTTATTAAAAGTGTGCAGTGTTTGAAAAAAGTATTTATCTTTGCGACCGTTTT GTAATCAAGAAAAGTAAAAC
Downstream 100 bases:
>100_bases GCTTGAAAATATTCGTATCCTATTGAAAAAGGAAGCTGCCTGTCGTGTGGCTTCCTTTTTTTAATTCATGGGTATTCAAC GGACTATATGAAACCCTATG
Product: putative outer membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MKKKVVLGAALMMMPLVSFAGGYLTNTNQHAAFLRSLSRGAAIDIDGALSNPAGLSFLPTDGFRVGVSIQSAFQTRDIDA SFSTYNGFDPVNKVPTVSDVPYKKYYKGKAAAPVIPSVFAAYKKGDWTISGFFAITGGGGKASFDDGLPMFESAAMAGIF KESVAKYIKTGGQSPIVTPDMYTINSAMDGKQYIYSLQLGLSYKITDWLSAFAGGRMNYFSGNYDGYLDAKLKQNFGGAD LMNLALDCDQTGWGLTPVLGVDVKYGKFNFGAKYEFKTNLNIENNTKKLDYPDSAEGLVGPYKHGVNTPNDIPSMLSVAA SYRFLPMLKASVEYHFFDDKKAGMAGGKQKELERGTNEYLFGIEWDVVKRLTISGGAQITDYGLSDNFQSDVSFSCDSYS LGFGAKVMLSEKMALNVGYMWTTYHDYTKKMDNYCGTGLPGQNVYSRTNKVFGLSLDYAF
Sequences:
>Translated_460_residues MKKKVVLGAALMMMPLVSFAGGYLTNTNQHAAFLRSLSRGAAIDIDGALSNPAGLSFLPTDGFRVGVSIQSAFQTRDIDA SFSTYNGFDPVNKVPTVSDVPYKKYYKGKAAAPVIPSVFAAYKKGDWTISGFFAITGGGGKASFDDGLPMFESAAMAGIF KESVAKYIKTGGQSPIVTPDMYTINSAMDGKQYIYSLQLGLSYKITDWLSAFAGGRMNYFSGNYDGYLDAKLKQNFGGAD LMNLALDCDQTGWGLTPVLGVDVKYGKFNFGAKYEFKTNLNIENNTKKLDYPDSAEGLVGPYKHGVNTPNDIPSMLSVAA SYRFLPMLKASVEYHFFDDKKAGMAGGKQKELERGTNEYLFGIEWDVVKRLTISGGAQITDYGLSDNFQSDVSFSCDSYS LGFGAKVMLSEKMALNVGYMWTTYHDYTKKMDNYCGTGLPGQNVYSRTNKVFGLSLDYAF >Mature_460_residues MKKKVVLGAALMMMPLVSFAGGYLTNTNQHAAFLRSLSRGAAIDIDGALSNPAGLSFLPTDGFRVGVSIQSAFQTRDIDA SFSTYNGFDPVNKVPTVSDVPYKKYYKGKAAAPVIPSVFAAYKKGDWTISGFFAITGGGGKASFDDGLPMFESAAMAGIF KESVAKYIKTGGQSPIVTPDMYTINSAMDGKQYIYSLQLGLSYKITDWLSAFAGGRMNYFSGNYDGYLDAKLKQNFGGAD LMNLALDCDQTGWGLTPVLGVDVKYGKFNFGAKYEFKTNLNIENNTKKLDYPDSAEGLVGPYKHGVNTPNDIPSMLSVAA SYRFLPMLKASVEYHFFDDKKAGMAGGKQKELERGTNEYLFGIEWDVVKRLTISGGAQITDYGLSDNFQSDVSFSCDSYS LGFGAKVMLSEKMALNVGYMWTTYHDYTKKMDNYCGTGLPGQNVYSRTNKVFGLSLDYAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50168; Mature: 50168
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKVVLGAALMMMPLVSFAGGYLTNTNQHAAFLRSLSRGAAIDIDGALSNPAGLSFLPT CCCEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEECC DGFRVGVSIQSAFQTRDIDASFSTYNGFDPVNKVPTVSDVPYKKYYKGKAAAPVIPSVFA CCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHH AYKKGDWTISGFFAITGGGGKASFDDGLPMFESAAMAGIFKESVAKYIKTGGQSPIVTPD HHCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC MYTINSAMDGKQYIYSLQLGLSYKITDWLSAFAGGRMNYFSGNYDGYLDAKLKQNFGGAD CEEECCCCCCCEEEEEEEECCEEEHHHHHHHHHCCCEEECCCCCCCEEEHHHHCCCCCCH LMNLALDCDQTGWGLTPVLGVDVKYGKFNFGAKYEFKTNLNIENNTKKLDYPDSAEGLVG HHHEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC PYKHGVNTPNDIPSMLSVAASYRFLPMLKASVEYHFFDDKKAGMAGGKQKELERGTNEYL CHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHCCCCCEE FGIEWDVVKRLTISGGAQITDYGLSDNFQSDVSFSCDSYSLGFGAKVMLSEKMALNVGYM EEEEHHHHHEEEECCCCEEEECCCCCCCCCCCCCCCCCEECCCCEEEEEECCEEEEECEE WTTYHDYTKKMDNYCGTGLPGQNVYSRTNKVFGLSLDYAF EEEHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEEEECCCC >Mature Secondary Structure MKKKVVLGAALMMMPLVSFAGGYLTNTNQHAAFLRSLSRGAAIDIDGALSNPAGLSFLPT CCCEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEECC DGFRVGVSIQSAFQTRDIDASFSTYNGFDPVNKVPTVSDVPYKKYYKGKAAAPVIPSVFA CCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHH AYKKGDWTISGFFAITGGGGKASFDDGLPMFESAAMAGIFKESVAKYIKTGGQSPIVTPD HHCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC MYTINSAMDGKQYIYSLQLGLSYKITDWLSAFAGGRMNYFSGNYDGYLDAKLKQNFGGAD CEEECCCCCCCEEEEEEEECCEEEHHHHHHHHHCCCEEECCCCCCCEEEHHHHCCCCCCH LMNLALDCDQTGWGLTPVLGVDVKYGKFNFGAKYEFKTNLNIENNTKKLDYPDSAEGLVG HHHEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC PYKHGVNTPNDIPSMLSVAASYRFLPMLKASVEYHFFDDKKAGMAGGKQKELERGTNEYL CHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHCCCCCEE FGIEWDVVKRLTISGGAQITDYGLSDNFQSDVSFSCDSYSLGFGAKVMLSEKMALNVGYM EEEEHHHHHEEEECCCCEEEECCCCCCCCCCCCCCCCCEECCCCEEEEEECCEEEEECEE WTTYHDYTKKMDNYCGTGLPGQNVYSRTNKVFGLSLDYAF EEEHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA