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The map label for this gene is ssb [H]

Identifier: 150008607

GI number: 150008607

Start: 2356400

End: 2356909

Strand: Reverse

Name: ssb [H]

Synonym: BDI_1993

Alternate gene names: 150008607

Gene position: 2356909-2356400 (Counterclockwise)

Preceding gene: 150008608

Following gene: 150008606

Centisome position: 48.99

GC content: 51.37

Gene sequence:

>510_bases
ATGTCATTGAATAAGGTTATATTGATCGGCAACGTAGGCAAAGATCCTGACGTTCGCTATTTTGACAGTGGTGCCGCTGT
CGCTAATTTCCCGCTGGCAACCTCGGAACGTGGGTATACGTTGGCAAATGGAACGGTGGTTCCGGAACGTACGGAGTGGC
ATAATATCGTAGTTCGTCGGGATTTGGTTCCTTTCGTGGAAAAATGGGTACGTAAAGGTTCCGGTGTATATGTGGAAGGC
AAGATTCGTACTCGTAATTATGATGACCAAAGCGGCGTGAAACGATATGTTACGGAGATCCATGCGGATCGTATCGAGTT
TTACAGCACGGGTTCCCGTCCGGCCGATGGTGGAAATACGACTGCACAAGGCGGTAGTATGCAGCCCAATGTGGGACAAG
GACAACCGGCTCAACCGACCACGGCGCCAAATACCGCTTATCAACAGCCAGCCGCCTCGCAGCCTAGCGCATTCTCAGAA
TCCAGTGACGCGGATGATCTCCCGTTCTGA

Upstream 100 bases:

>100_bases
CGTTCCCCGGCTGATACATATTTATTTAGAGAAATTAAACGGAAACTTGTGAGAATGATTGAATTTGTGTTTCTTTGTAT
GGTTATTAAGAATTTGAATT

Downstream 100 bases:

>100_bases
TATTGTTTAACTAATACTGTTTCCCTTGGACTCGGACTATTATTTATGGGGCTTATTTGAAAACGTAACGGTGCAGGCGC
TGACAGCGGGTCCTGTGATC

Product: single-stranded binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSLNKVILIGNVGKDPDVRYFDSGAAVANFPLATSERGYTLANGTVVPERTEWHNIVVRRDLVPFVEKWVRKGSGVYVEG
KIRTRNYDDQSGVKRYVTEIHADRIEFYSTGSRPADGGNTTAQGGSMQPNVGQGQPAQPTTAPNTAYQQPAASQPSAFSE
SSDADDLPF

Sequences:

>Translated_169_residues
MSLNKVILIGNVGKDPDVRYFDSGAAVANFPLATSERGYTLANGTVVPERTEWHNIVVRRDLVPFVEKWVRKGSGVYVEG
KIRTRNYDDQSGVKRYVTEIHADRIEFYSTGSRPADGGNTTAQGGSMQPNVGQGQPAQPTTAPNTAYQQPAASQPSAFSE
SSDADDLPF
>Mature_168_residues
SLNKVILIGNVGKDPDVRYFDSGAAVANFPLATSERGYTLANGTVVPERTEWHNIVVRRDLVPFVEKWVRKGSGVYVEGK
IRTRNYDDQSGVKRYVTEIHADRIEFYSTGSRPADGGNTTAQGGSMQPNVGQGQPAQPTTAPNTAYQQPAASQPSAFSES
SDADDLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=123, Percent_Identity=38.2113821138211, Blast_Score=69, Evalue=2e-12,
Organism=Escherichia coli, GI1790494, Length=98, Percent_Identity=52.0408163265306, Blast_Score=105, Evalue=1e-24,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18352; Mature: 18221

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNKVILIGNVGKDPDVRYFDSGAAVANFPLATSERGYTLANGTVVPERTEWHNIVVRR
CCCCCEEEEECCCCCCCCEEECCCCCEEECCCCCCCCCEEEECCEECCCCCCCCEEEEHH
DLVPFVEKWVRKGSGVYVEGKIRTRNYDDQSGVKRYVTEIHADRIEFYSTGSRPADGGNT
HHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC
TAQGGSMQPNVGQGQPAQPTTAPNTAYQQPAASQPSAFSESSDADDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLNKVILIGNVGKDPDVRYFDSGAAVANFPLATSERGYTLANGTVVPERTEWHNIVVRR
CCCCEEEEECCCCCCCCEEECCCCCEEECCCCCCCCCEEEECCEECCCCCCCCEEEEHH
DLVPFVEKWVRKGSGVYVEGKIRTRNYDDQSGVKRYVTEIHADRIEFYSTGSRPADGGNT
HHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC
TAQGGSMQPNVGQGQPAQPTTAPNTAYQQPAASQPSAFSESSDADDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12663928 [H]