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The map label for this gene is ybjY [C]

Identifier: 150008585

GI number: 150008585

Start: 2334521

End: 2335933

Strand: Reverse

Name: ybjY [C]

Synonym: BDI_1971

Alternate gene names: 150008585

Gene position: 2335933-2334521 (Counterclockwise)

Preceding gene: 150008590

Following gene: 150008584

Centisome position: 48.55

GC content: 47.77

Gene sequence:

>1413_bases
TTGAATATCTGTAGATTCTCATTGCTGATGTCTTTGTTTTCGTACAAAAGCGGACACAGTGTTCGATATCGGACATCTCT
TTTGTTTTATTTCTTCAATAAATCAATCACTTACGTTTTTGGCACGGGGTTTGCTCTTTGGAGGGTGGAAAATAAAAACA
AACGAAATATGGACAGAGAGATATCAAAAGAGGTTCGGCAGAAGGAGCAGCGTAAACAGTTTATAAAGCTGGGGGCGGGG
ATCGGTATTGCCGTTGTCTTGATTGGCGGGGTGATCGGTTTTATGCAAACCAGCCTGCAACGGAAGGACTTGGTTTTTTC
AACGGTAGATAAAGGAGTGATCGAGGTTTCCGTTAGCGCATCCGGCAAGGTGGTACCTGCTTTCGAGGAAATCATCAACT
CACCGATCAACTCCCGTATCGTCGAGATTTATAAAAAGGGAGGCGATTCCGTGGATGTAGGTACTCCGATCTTGAAACTG
GACTTGCTAAGCGCCGAGACGGATTATAAGAAACAATTGGACGAGGAGCAAATGAAACGCCTCCAATTGGATCAACTCCG
TATCCAAAACCGCAATAAGCTTTCCGAGATGGAGATGCAATTGAAAGTCTCTCGCATGGAACTGAACCGAAAGGAAGTGG
AGTTGCGCAACGAGCGTTATCTGGATAGCCTAGGCGCCGGAACGACCGATAAGGTCCGTCAAGTGGAACTGGACTATAAC
GTTAGCGTCTTGAAACTGAAAGAGGATGAGCAAAAATATGAGAACGAGAAATCCTTGACGGATGCCGATTATAAAGTGAA
AGAACTCGACCTGAACATCTTCCGAAAGAGTCTAGCCGAGACGAAGCGTACCTTGGAAGACGCCCAGATACGCTCTCCCC
GCAAGGCGATCCTGACCTACGTGAACAACGAGGTAGGTGCCCAAGTCTCTCAAGGCAGTCGTGTCGCTATCGTCTCCGAC
TTGTCCCATTTCAAGATAGAGGGGGAGATCGCCGATACCTATGGCGACCGGATCGCCGCCGGTAGCAAGGCCGTCGTAAA
GATCGGCAACGATAAACTGGATGGGGTGGTTAGCGATGTTACCCCCTTATCGAAGAACGGCGTGATCTCCTTCACGGTAC
AGTTGGAGGAGGATAACCATCGCCGCTTGCGCTCCGGTTTGAAGACCGATGTATACGTGATGAATGCGATCAAGGACGAT
GTGCTGCGTATTTCCAACGCCTCGTTCTACGTCGGGAAAGGAGAGTATGAGTTGTTTGTTGTCAACGGAGACCAATTGAT
CAAGCGGAAGGTACAGCTGGGAGACAGCAACTTTGAGTATGTAGAAGTAGTAGGTGGCTTGGAACCGGGTGACGAGGTGG
TCGTTTCCGATATGACAAGTTTCAAGGAAAAGAATAAACTGAAATTGAAATAA

Upstream 100 bases:

>100_bases
TTTAGGGTAAATAATATAAGATTGGTATTCCTTGATTATGGATTTTTCCAAAAATAGTCCTTTTTGTAAAGATAATCAAG
TATTTATATGTTAATTATGA

Downstream 100 bases:

>100_bases
CGATTCGAATTATGTATAAGCAGTACATCAAACAAGCGGTTCAAATGCTGCGTGAAAATACGCTCGTAAGCATAATCTCT
ATTTCGGGAACGGCCCTTGC

Product: ABC transporter permease

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; Efflux Transporter Rnd Family Mfp Subunit; ABC Transporter Permease; HlyD Family Secretion Protein; Efflux Transporter MFP Component RND Family; Efflux Transporter MFP Component RND Family Protein; Efflux Transporter; ABC Transporter Component Protein; Secretion Protein HlyD; Membrane-Fusion Protein; HlyD Family Transporter Protein; Membrane Fusion Protein; HlyD Family Transporter; ABC Transporter Permease Protein

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MNICRFSLLMSLFSYKSGHSVRYRTSLLFYFFNKSITYVFGTGFALWRVENKNKRNMDREISKEVRQKEQRKQFIKLGAG
IGIAVVLIGGVIGFMQTSLQRKDLVFSTVDKGVIEVSVSASGKVVPAFEEIINSPINSRIVEIYKKGGDSVDVGTPILKL
DLLSAETDYKKQLDEEQMKRLQLDQLRIQNRNKLSEMEMQLKVSRMELNRKEVELRNERYLDSLGAGTTDKVRQVELDYN
VSVLKLKEDEQKYENEKSLTDADYKVKELDLNIFRKSLAETKRTLEDAQIRSPRKAILTYVNNEVGAQVSQGSRVAIVSD
LSHFKIEGEIADTYGDRIAAGSKAVVKIGNDKLDGVVSDVTPLSKNGVISFTVQLEEDNHRRLRSGLKTDVYVMNAIKDD
VLRISNASFYVGKGEYELFVVNGDQLIKRKVQLGDSNFEYVEVVGGLEPGDEVVVSDMTSFKEKNKLKLK

Sequences:

>Translated_470_residues
MNICRFSLLMSLFSYKSGHSVRYRTSLLFYFFNKSITYVFGTGFALWRVENKNKRNMDREISKEVRQKEQRKQFIKLGAG
IGIAVVLIGGVIGFMQTSLQRKDLVFSTVDKGVIEVSVSASGKVVPAFEEIINSPINSRIVEIYKKGGDSVDVGTPILKL
DLLSAETDYKKQLDEEQMKRLQLDQLRIQNRNKLSEMEMQLKVSRMELNRKEVELRNERYLDSLGAGTTDKVRQVELDYN
VSVLKLKEDEQKYENEKSLTDADYKVKELDLNIFRKSLAETKRTLEDAQIRSPRKAILTYVNNEVGAQVSQGSRVAIVSD
LSHFKIEGEIADTYGDRIAAGSKAVVKIGNDKLDGVVSDVTPLSKNGVISFTVQLEEDNHRRLRSGLKTDVYVMNAIKDD
VLRISNASFYVGKGEYELFVVNGDQLIKRKVQLGDSNFEYVEVVGGLEPGDEVVVSDMTSFKEKNKLKLK
>Mature_470_residues
MNICRFSLLMSLFSYKSGHSVRYRTSLLFYFFNKSITYVFGTGFALWRVENKNKRNMDREISKEVRQKEQRKQFIKLGAG
IGIAVVLIGGVIGFMQTSLQRKDLVFSTVDKGVIEVSVSASGKVVPAFEEIINSPINSRIVEIYKKGGDSVDVGTPILKL
DLLSAETDYKKQLDEEQMKRLQLDQLRIQNRNKLSEMEMQLKVSRMELNRKEVELRNERYLDSLGAGTTDKVRQVELDYN
VSVLKLKEDEQKYENEKSLTDADYKVKELDLNIFRKSLAETKRTLEDAQIRSPRKAILTYVNNEVGAQVSQGSRVAIVSD
LSHFKIEGEIADTYGDRIAAGSKAVVKIGNDKLDGVVSDVTPLSKNGVISFTVQLEEDNHRRLRSGLKTDVYVMNAIKDD
VLRISNASFYVGKGEYELFVVNGDQLIKRKVQLGDSNFEYVEVVGGLEPGDEVVVSDMTSFKEKNKLKLK

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53226; Mature: 53226

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNICRFSLLMSLFSYKSGHSVRYRTSLLFYFFNKSITYVFGTGFALWRVENKNKRNMDRE
CCHHHHHHHHHHHHCCCCCCEEEHHHEEEEEECCCEEEEEECCEEEEEECCCCCCCHHHH
ISKEVRQKEQRKQFIKLGAGIGIAVVLIGGVIGFMQTSLQRKDLVFSTVDKGVIEVSVSA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
SGKVVPAFEEIINSPINSRIVEIYKKGGDSVDVGTPILKLDLLSAETDYKKQLDEEQMKR
CCCEEHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHCCHHHHHH
LQLDQLRIQNRNKLSEMEMQLKVSRMELNRKEVELRNERYLDSLGAGTTDKVRQVELDYN
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
VSVLKLKEDEQKYENEKSLTDADYKVKELDLNIFRKSLAETKRTLEDAQIRSPRKAILTY
EEEEEECCHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VNNEVGAQVSQGSRVAIVSDLSHFKIEGEIADTYGDRIAAGSKAVVKIGNDKLDGVVSDV
HCCHHCCEECCCCEEEEEECCCCEEEEEEEEHHCCCHHCCCCCEEEEECCCCCCCHHHCC
TPLSKNGVISFTVQLEEDNHRRLRSGLKTDVYVMNAIKDDVLRISNASFYVGKGEYELFV
CCCCCCCEEEEEEEECCCCHHHHHCCCCCCEEEHHHHHHHHHEECCCEEEEECCCEEEEE
VNGDQLIKRKVQLGDSNFEYVEVVGGLEPGDEVVVSDMTSFKEKNKLKLK
ECCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNICRFSLLMSLFSYKSGHSVRYRTSLLFYFFNKSITYVFGTGFALWRVENKNKRNMDRE
CCHHHHHHHHHHHHCCCCCCEEEHHHEEEEEECCCEEEEEECCEEEEEECCCCCCCHHHH
ISKEVRQKEQRKQFIKLGAGIGIAVVLIGGVIGFMQTSLQRKDLVFSTVDKGVIEVSVSA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
SGKVVPAFEEIINSPINSRIVEIYKKGGDSVDVGTPILKLDLLSAETDYKKQLDEEQMKR
CCCEEHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHCCHHHHHH
LQLDQLRIQNRNKLSEMEMQLKVSRMELNRKEVELRNERYLDSLGAGTTDKVRQVELDYN
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
VSVLKLKEDEQKYENEKSLTDADYKVKELDLNIFRKSLAETKRTLEDAQIRSPRKAILTY
EEEEEECCHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
VNNEVGAQVSQGSRVAIVSDLSHFKIEGEIADTYGDRIAAGSKAVVKIGNDKLDGVVSDV
HCCHHCCEECCCCEEEEEECCCCEEEEEEEEHHCCCHHCCCCCEEEEECCCCCCCHHHCC
TPLSKNGVISFTVQLEEDNHRRLRSGLKTDVYVMNAIKDDVLRISNASFYVGKGEYELFV
CCCCCCCEEEEEEEECCCCHHHHHCCCCCCEEEHHHHHHHHHEECCCEEEEECCCEEEEE
VNGDQLIKRKVQLGDSNFEYVEVVGGLEPGDEVVVSDMTSFKEKNKLKLK
ECCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA