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The map label for this gene is recQ [C]

Identifier: 150008554

GI number: 150008554

Start: 2298947

End: 2301091

Strand: Direct

Name: recQ [C]

Synonym: BDI_1940

Alternate gene names: 150008554

Gene position: 2298947-2301091 (Clockwise)

Preceding gene: 150008553

Following gene: 150008557

Centisome position: 47.78

GC content: 46.29

Gene sequence:

>2145_bases
ATGATGCAGACGAATTTACAATTGGACCTTGCCTTCAACTATCTGGAAAATACCGGAACCAACATCTTCCTTACCGGAAA
AGCGGGAACAGGAAAGACCACATTCTTGAAAAAACTTAAAGAGACTTCCCCAAAACGGATGATTGTGGTAGCACCTACCG
GAGTGGCGGCGATTAATGCGGGAGGGGTAACCATTCACTCCTTCTTTCAGCTACCTTTCGGACCGTATATACCGGGTAGC
GAAATGGCCTCCGGGCAAAATAAATCCTATTCTCATAAATTCAGCCGGGATAAGATCAATATCATCCGTAGTATGGACCT
GCTCGTGATTGATGAGGTCAGTATGGTACGTGCCGATTTGCTGGATGCTATCAGTGATATGCTACGTCGTTATCGGGATA
GGAATAAACCCTTTGGGGGCGTTCAATTATTATTGATCGGAGATTTACAACAATTAGCCCCCGTAGCGAAGGAGGACGAA
TGGAATTTGTTGAGAGAACATTACGCCTCTCCCTTCTTTTTTGACAGTAAGGCTCTTTCCGAAAGTGATTATCTTTGCAT
CGAATTAACTCAAGTATATCGCCAAGCGGACGATACGTTCGTACGCTTATTGAACAATATCCGGGAAAACCGCTTCGACG
AGAATACGCTACACACCTTAAACCAACGTTATATCCCCAATTTTAAACCAAATGACAAAGCAGGTTATATCACGCTGACA
ACCCATAATTATCAAGCCCAGCAAATCAATAACCGGAAGTTGCAAGAATTACCCGGCCCGGCTTATACGTACAAGGCGGA
GATCAAGGATGACTTTCCAGCTTACTCCTACCCGACCGACGAGGTATTGGAGCTAAAGCAAGACGCTCAAGTCATGTTCG
TAAAAAACGACTCTTCCGGCGAAAGGCGATATTATAACGGAAAGATCGGCCGAATTGTCTTCATCAGCCCGAGCAAGATT
ATCGTATCCGACGAATTAGGAAACGATATCACCGTAGACCGGGAGACATGGACAAACGTGAAATATACGATCGACGAGAA
CACGAAGGATATCACGGAGACAATCGCCGGCTCTTTCAGCCAATACCCACTGAAAACCGCTTGGGCGATCACGATCCATA
AAAGCCAAGGCTTGACTTTCGAGCATGCCATCATCGACGCATCCGCCGCCTTCTCACACGGACAAGTCTACGTTGCTTTG
AGCCGTTGCAAGACATTGGAAGGAATGGTATTAAGTAGCCCGATCACTCGAAACGCCATGATTAGCGATGAGAAGATATT
AAGTTATACCTCTTCCCTCTCGGAGCGTCAACCGTGTGAAGACCAACTGCGTCAAGCCCAACAACAGTATTATTTGAGAT
TGGCAACCGAGCTATTCGACTTCAATCCCGTACAACAAAAGTTGCAATATACATCTTACGCGGCATACACCCATCTGCAA
AAACTATACCCGGAATTAAGCAACCAATATCCCCGGGTACGGGATTATTTCCGTTCGGATATAGTAGAAGTAGGCGAACG
TTTCTGCCAGCAACTCACCCGTATGATCTCCAGCACGAATCTCTATGATACGGACGAGCATATACAAGACCGCATCCGAA
AAGGTTGCGCTTACTTTCTGGAAAAGATCGAGACCTATTGCCTCCCTTTGATAGAGGCTTCCGATGTAGAGATCGACAAT
AAAGAGGCCCGTAAGGCATTTACATCCGCATTAAAAGCTTTCAGCGATGAGCTTACGATCAAGGTCGCTACATTAAAAGC
CTGCCAAGATGGTTTTCGTCTCATCGACTATCTATCCGCCAAGGCTAAAGCGAACATTGAGGAGTCGGCTGTTGCCAGCA
AGCAGAAATCGACGCGGAAATCGACGGAAGCGGAAAAGATCCCCGTCTCCACGGATGTCTTACATCCTGAGCTATATGCC
CGTTTGAAACAATGGAGATACGAGCTTGCCGTAGAAAAGGAGTTGCCTCCTTACACGATCTTGCAACAGAAAGCCTTAAT
TGGCGTTTGCAACACTTTGCCCACGAACTCGAAAGAACTGTTGAAGATACCCGGAATCGGCAAAAAGATCATAGAGAACT
ACGGTGAGACCCTATTAGAAATCGTATCTTCCTACTCACCTTCCACGCATGGGAACGGGCTGTGA

Upstream 100 bases:

>100_bases
GGATGTAGATTTTAGCGCAGTTACTCCGTTTATTTTCCATTTGAGAAGGACGTTTGAAAGATTATACGTACATTTGTGAA
TTCACCTAAACAGCTTAAAT

Downstream 100 bases:

>100_bases
GATACGGAGACAACTCACGATAGCGGCGACTAAAGCGAAACCGATCGCTACATACATACAAACCGGCATACTATCGGTGG
CAGAGGTAACACTAAAGATC

Product: putative helicase

Products: NA

Alternate protein names: Helicase; TPR Domain Protein; TPR Domain-Containing Protein; ATPase; Exonuclease V Subunit Alpha; Helicase-Related Protein; 5-3' DNA Helicase; ATP-Dependent Exodeoxyribonuclease Alpha Subunit; Aaa ATPase; Glycosysltransferase; Hrdc Domain Protein; HRDC Domain Protein; Helicase-Family Protein; RecD-Like Exodeoxyribonuclease V Alpha Chain; RRM3/PIF1 Helicase-Like Protein; Helicase Protein; ATP-Dependent ExoDNAse Alpha Subunit; DNA Helicase AAA ATPase; DNA Helicase/AAA ATPase; Helicase RecD/TraA Family

Number of amino acids: Translated: 714; Mature: 714

Protein sequence:

>714_residues
MMQTNLQLDLAFNYLENTGTNIFLTGKAGTGKTTFLKKLKETSPKRMIVVAPTGVAAINAGGVTIHSFFQLPFGPYIPGS
EMASGQNKSYSHKFSRDKINIIRSMDLLVIDEVSMVRADLLDAISDMLRRYRDRNKPFGGVQLLLIGDLQQLAPVAKEDE
WNLLREHYASPFFFDSKALSESDYLCIELTQVYRQADDTFVRLLNNIRENRFDENTLHTLNQRYIPNFKPNDKAGYITLT
THNYQAQQINNRKLQELPGPAYTYKAEIKDDFPAYSYPTDEVLELKQDAQVMFVKNDSSGERRYYNGKIGRIVFISPSKI
IVSDELGNDITVDRETWTNVKYTIDENTKDITETIAGSFSQYPLKTAWAITIHKSQGLTFEHAIIDASAAFSHGQVYVAL
SRCKTLEGMVLSSPITRNAMISDEKILSYTSSLSERQPCEDQLRQAQQQYYLRLATELFDFNPVQQKLQYTSYAAYTHLQ
KLYPELSNQYPRVRDYFRSDIVEVGERFCQQLTRMISSTNLYDTDEHIQDRIRKGCAYFLEKIETYCLPLIEASDVEIDN
KEARKAFTSALKAFSDELTIKVATLKACQDGFRLIDYLSAKAKANIEESAVASKQKSTRKSTEAEKIPVSTDVLHPELYA
RLKQWRYELAVEKELPPYTILQQKALIGVCNTLPTNSKELLKIPGIGKKIIENYGETLLEIVSSYSPSTHGNGL

Sequences:

>Translated_714_residues
MMQTNLQLDLAFNYLENTGTNIFLTGKAGTGKTTFLKKLKETSPKRMIVVAPTGVAAINAGGVTIHSFFQLPFGPYIPGS
EMASGQNKSYSHKFSRDKINIIRSMDLLVIDEVSMVRADLLDAISDMLRRYRDRNKPFGGVQLLLIGDLQQLAPVAKEDE
WNLLREHYASPFFFDSKALSESDYLCIELTQVYRQADDTFVRLLNNIRENRFDENTLHTLNQRYIPNFKPNDKAGYITLT
THNYQAQQINNRKLQELPGPAYTYKAEIKDDFPAYSYPTDEVLELKQDAQVMFVKNDSSGERRYYNGKIGRIVFISPSKI
IVSDELGNDITVDRETWTNVKYTIDENTKDITETIAGSFSQYPLKTAWAITIHKSQGLTFEHAIIDASAAFSHGQVYVAL
SRCKTLEGMVLSSPITRNAMISDEKILSYTSSLSERQPCEDQLRQAQQQYYLRLATELFDFNPVQQKLQYTSYAAYTHLQ
KLYPELSNQYPRVRDYFRSDIVEVGERFCQQLTRMISSTNLYDTDEHIQDRIRKGCAYFLEKIETYCLPLIEASDVEIDN
KEARKAFTSALKAFSDELTIKVATLKACQDGFRLIDYLSAKAKANIEESAVASKQKSTRKSTEAEKIPVSTDVLHPELYA
RLKQWRYELAVEKELPPYTILQQKALIGVCNTLPTNSKELLKIPGIGKKIIENYGETLLEIVSSYSPSTHGNGL
>Mature_714_residues
MMQTNLQLDLAFNYLENTGTNIFLTGKAGTGKTTFLKKLKETSPKRMIVVAPTGVAAINAGGVTIHSFFQLPFGPYIPGS
EMASGQNKSYSHKFSRDKINIIRSMDLLVIDEVSMVRADLLDAISDMLRRYRDRNKPFGGVQLLLIGDLQQLAPVAKEDE
WNLLREHYASPFFFDSKALSESDYLCIELTQVYRQADDTFVRLLNNIRENRFDENTLHTLNQRYIPNFKPNDKAGYITLT
THNYQAQQINNRKLQELPGPAYTYKAEIKDDFPAYSYPTDEVLELKQDAQVMFVKNDSSGERRYYNGKIGRIVFISPSKI
IVSDELGNDITVDRETWTNVKYTIDENTKDITETIAGSFSQYPLKTAWAITIHKSQGLTFEHAIIDASAAFSHGQVYVAL
SRCKTLEGMVLSSPITRNAMISDEKILSYTSSLSERQPCEDQLRQAQQQYYLRLATELFDFNPVQQKLQYTSYAAYTHLQ
KLYPELSNQYPRVRDYFRSDIVEVGERFCQQLTRMISSTNLYDTDEHIQDRIRKGCAYFLEKIETYCLPLIEASDVEIDN
KEARKAFTSALKAFSDELTIKVATLKACQDGFRLIDYLSAKAKANIEESAVASKQKSTRKSTEAEKIPVSTDVLHPELYA
RLKQWRYELAVEKELPPYTILQQKALIGVCNTLPTNSKELLKIPGIGKKIIENYGETLLEIVSSYSPSTHGNGL

Specific function: Involved In The Recf Recombination Pathway; Its Gene Expression Is Under The Regulation Of The Sos System. It Is A DNA Helicase. [C]

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI82546872, Length=424, Percent_Identity=34.9056603773585, Blast_Score=206, Evalue=8e-53,
Organism=Caenorhabditis elegans, GI25143421, Length=402, Percent_Identity=32.3383084577114, Blast_Score=174, Evalue=2e-43,
Organism=Saccharomyces cerevisiae, GI6321820, Length=486, Percent_Identity=29.6296296296296, Blast_Score=178, Evalue=3e-45,
Organism=Saccharomyces cerevisiae, GI6323579, Length=370, Percent_Identity=30.8108108108108, Blast_Score=152, Evalue=2e-37,
Organism=Drosophila melanogaster, GI19920652, Length=406, Percent_Identity=31.5270935960591, Blast_Score=172, Evalue=8e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.1.- [C]

Molecular weight: Translated: 81260; Mature: 81260

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50967 HRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQTNLQLDLAFNYLENTGTNIFLTGKAGTGKTTFLKKLKETSPKRMIVVAPTGVAAINA
CCCCCEEEEEEEEHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEC
GGVTIHSFFQLPFGPYIPGSEMASGQNKSYSHKFSRDKINIIRSMDLLVIDEVSMVRADL
CCEEEEEEHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEECHHHHHHHHH
LDAISDMLRRYRDRNKPFGGVQLLLIGDLQQLAPVAKEDEWNLLREHYASPFFFDSKALS
HHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHCCCCEEECCHHCC
ESDYLCIELTQVYRQADDTFVRLLNNIRENRFDENTLHTLNQRYIPNFKPNDKAGYITLT
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEE
THNYQAQQINNRKLQELPGPAYTYKAEIKDDFPAYSYPTDEVLELKQDAQVMFVKNDSSG
ECCCCHHHHCCCHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCC
ERRYYNGKIGRIVFISPSKIIVSDELGNDITVDRETWTNVKYTIDENTKDITETIAGSFS
CCEEECCCCCEEEEECCCEEEEECCCCCCEEECCCCCCCEEEEECCCHHHHHHHHHCCCC
QYPLKTAWAITIHKSQGLTFEHAIIDASAAFSHGQVYVALSRCKTLEGMVLSSPITRNAM
CCCCCEEEEEEEECCCCCEEHHHHEEHHHCCCCCEEEEEEHHHHHHCCEEECCCCCCCCC
ISDEKILSYTSSLSERQPCEDQLRQAQQQYYLRLATELFDFNPVQQKLQYTSYAAYTHLQ
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
KLYPELSNQYPRVRDYFRSDIVEVGERFCQQLTRMISSTNLYDTDEHIQDRIRKGCAYFL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
EKIETYCLPLIEASDVEIDNKEARKAFTSALKAFSDELTIKVATLKACQDGFRLIDYLSA
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHH
KAKANIEESAVASKQKSTRKSTEAEKIPVSTDVLHPELYARLKQWRYELAVEKELPPYTI
HHHCCCHHHHHHHHHHHHHHCCCHHCCCCCHHHCCHHHHHHHHHHHHHHEECCCCCCHHH
LQQKALIGVCNTLPTNSKELLKIPGIGKKIIENYGETLLEIVSSYSPSTHGNGL
HHHHHHHHHHCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MMQTNLQLDLAFNYLENTGTNIFLTGKAGTGKTTFLKKLKETSPKRMIVVAPTGVAAINA
CCCCCEEEEEEEEHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEC
GGVTIHSFFQLPFGPYIPGSEMASGQNKSYSHKFSRDKINIIRSMDLLVIDEVSMVRADL
CCEEEEEEHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEECHHHHHHHHH
LDAISDMLRRYRDRNKPFGGVQLLLIGDLQQLAPVAKEDEWNLLREHYASPFFFDSKALS
HHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHCCCCEEECCHHCC
ESDYLCIELTQVYRQADDTFVRLLNNIRENRFDENTLHTLNQRYIPNFKPNDKAGYITLT
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEE
THNYQAQQINNRKLQELPGPAYTYKAEIKDDFPAYSYPTDEVLELKQDAQVMFVKNDSSG
ECCCCHHHHCCCHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCC
ERRYYNGKIGRIVFISPSKIIVSDELGNDITVDRETWTNVKYTIDENTKDITETIAGSFS
CCEEECCCCCEEEEECCCEEEEECCCCCCEEECCCCCCCEEEEECCCHHHHHHHHHCCCC
QYPLKTAWAITIHKSQGLTFEHAIIDASAAFSHGQVYVALSRCKTLEGMVLSSPITRNAM
CCCCCEEEEEEEECCCCCEEHHHHEEHHHCCCCCEEEEEEHHHHHHCCEEECCCCCCCCC
ISDEKILSYTSSLSERQPCEDQLRQAQQQYYLRLATELFDFNPVQQKLQYTSYAAYTHLQ
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
KLYPELSNQYPRVRDYFRSDIVEVGERFCQQLTRMISSTNLYDTDEHIQDRIRKGCAYFL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
EKIETYCLPLIEASDVEIDNKEARKAFTSALKAFSDELTIKVATLKACQDGFRLIDYLSA
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHH
KAKANIEESAVASKQKSTRKSTEAEKIPVSTDVLHPELYARLKQWRYELAVEKELPPYTI
HHHCCCHHHHHHHHHHHHHHCCCHHCCCCCHHHCCHHHHHHHHHHHHHHEECCCCCCHHH
LQQKALIGVCNTLPTNSKELLKIPGIGKKIIENYGETLLEIVSSYSPSTHGNGL
HHHHHHHHHHCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA