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The map label for this gene is ybdF [C]

Identifier: 150008553

GI number: 150008553

Start: 2298492

End: 2298854

Strand: Direct

Name: ybdF [C]

Synonym: BDI_1939

Alternate gene names: 150008553

Gene position: 2298492-2298854 (Clockwise)

Preceding gene: 150008552

Following gene: 150008554

Centisome position: 47.77

GC content: 35.81

Gene sequence:

>363_bases
ATGAATATTGAAGAGTTTAGGGAATATTGCCTTTCGTTGAATGGTGTTTATGAAAAAATGCCTTTCACGAATGTTCCTGA
TAAATACAGTCGGGACGTTCTTTGCTTTTATGTAGGAAGTAAATGGTTCTGCTTCGTAAATATCGAAGTATTTGATTTTT
GCTGTATCAAATGTGACCCGAATGAATCGGGAGAGTTGCAAGCTCGATACTCTGGCATAACACCCGGTTGGCATATGAAT
AAAAAATACTGGATTAGTGTCTATTTTAATCAAGATGTACCCGACAACAAGATCAAAGAGCTTATAAAACAATCCTACGA
TATCGTATATCAATCTCTTCCTAAAAAGGAAAAAGGGATGTAG

Upstream 100 bases:

>100_bases
AGCGGTGGAACTAGAGGCTCCCGCTACTGAAGTCTCCGTCCAACCATTGAGTTTCTTAGTCTATAGGATATCGCTATAAT
CTATCATACATACGAATGTT

Downstream 100 bases:

>100_bases
ATTTTAGCGCAGTTACTCCGTTTATTTTCCATTTGAGAAGGACGTTTGAAAGATTATACGTACATTTGTGAATTCACCTA
AACAGCTTAAATATGATGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MNIEEFREYCLSLNGVYEKMPFTNVPDKYSRDVLCFYVGSKWFCFVNIEVFDFCCIKCDPNESGELQARYSGITPGWHMN
KKYWISVYFNQDVPDNKIKELIKQSYDIVYQSLPKKEKGM

Sequences:

>Translated_120_residues
MNIEEFREYCLSLNGVYEKMPFTNVPDKYSRDVLCFYVGSKWFCFVNIEVFDFCCIKCDPNESGELQARYSGITPGWHMN
KKYWISVYFNQDVPDNKIKELIKQSYDIVYQSLPKKEKGM
>Mature_120_residues
MNIEEFREYCLSLNGVYEKMPFTNVPDKYSRDVLCFYVGSKWFCFVNIEVFDFCCIKCDPNESGELQARYSGITPGWHMN
KKYWISVYFNQDVPDNKIKELIKQSYDIVYQSLPKKEKGM

Specific function: Unknown

COG id: COG2315

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786793, Length=101, Percent_Identity=31.6831683168317, Blast_Score=62, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14275; Mature: 14275

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIEEFREYCLSLNGVYEKMPFTNVPDKYSRDVLCFYVGSKWFCFVNIEVFDFCCIKCDP
CCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCEEEEEECCEEEEEEEEEEEEEEEEEECC
NESGELQARYSGITPGWHMNKKYWISVYFNQDVPDNKIKELIKQSYDIVYQSLPKKEKGM
CCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNIEEFREYCLSLNGVYEKMPFTNVPDKYSRDVLCFYVGSKWFCFVNIEVFDFCCIKCDP
CCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCEEEEEECCEEEEEEEEEEEEEEEEEECC
NESGELQARYSGITPGWHMNKKYWISVYFNQDVPDNKIKELIKQSYDIVYQSLPKKEKGM
CCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA